BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0028.0034.p         (97 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_576931.1| hypothetical protein Nham_1654 [Nitrobacter ham...   180   6e-44
ref|NP_772165.1| hypothetical protein blr5525 [Bradyrhizobium ja...   173   1e-41
ref|YP_317939.1| hypothetical protein Nwi_1326 [Nitrobacter wino...   171   3e-41
ref|YP_570376.1| hypothetical protein RPD_3251 [Rhodopseudomonas...   166   9e-40
ref|YP_781263.1| hypothetical protein RPE_2343 [Rhodopseudomonas...   166   2e-39

>ref|YP_576931.1| hypothetical protein Nham_1654 [Nitrobacter hamburgensis X14]
 sp|Q1QMS6.1|Y1654_NITHX RecName: Full=UPF0161 protein Nham_1654
 gb|ABE62471.1| protein of unknown function DUF37 [Nitrobacter hamburgensis X14]
          Length = 114

 Score =  180 bits (457), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 87/94 (92%), Positives = 88/94 (93%)

Query: 3   RLPRNFGRALIWIYRHTLSPLVGYNCRHLPTCSVYGDEAIERFGLWGGGWMTLARLLRCQ 62
           RLPRN GRALIWIYRHTLSPLVG+NCRHLPTCSVYGDEAIERFGLWGGGWMTLARLLRCQ
Sbjct: 20  RLPRNSGRALIWIYRHTLSPLVGFNCRHLPTCSVYGDEAIERFGLWGGGWMTLARLLRCQ 79

Query: 63  PWGTSGIDNVPLTKPPGARWYLPWSYGRWRGVNE 96
           PWGTSGIDNVP TKPPGA WY PW YGRWRGVN 
Sbjct: 80  PWGTSGIDNVPATKPPGASWYRPWRYGRWRGVNA 113


>ref|NP_772165.1| hypothetical protein blr5525 [Bradyrhizobium japonicum USDA 110]
 sp|Q89IV9.1|Y5525_BRAJA RecName: Full=UPF0161 protein blr5525
 dbj|BAC50790.1| blr5525 [Bradyrhizobium japonicum USDA 110]
          Length = 112

 Score =  173 bits (438), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 83/93 (89%), Positives = 85/93 (91%)

Query: 3   RLPRNFGRALIWIYRHTLSPLVGYNCRHLPTCSVYGDEAIERFGLWGGGWMTLARLLRCQ 62
           RLPR FGRALIW+YRHTLSPLVGYNCRHLPTCSVYGDEAIERFGLW GGWMTLARLLRC 
Sbjct: 18  RLPRRFGRALIWLYRHTLSPLVGYNCRHLPTCSVYGDEAIERFGLWAGGWMTLARLLRCN 77

Query: 63  PWGTSGIDNVPLTKPPGARWYLPWSYGRWRGVN 95
           P+GTSGIDNVPL  P  ARWYLPW YGRWRGVN
Sbjct: 78  PFGTSGIDNVPLAAPQDARWYLPWRYGRWRGVN 110


>ref|YP_317939.1| hypothetical protein Nwi_1326 [Nitrobacter winogradskyi Nb-255]
 sp|Q3ST04.1|Y1326_NITWN RecName: Full=UPF0161 protein Nwi_1326
 gb|ABA04587.1| Protein of unknown function DUF37 [Nitrobacter winogradskyi Nb-255]
          Length = 117

 Score =  171 bits (434), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 81/94 (86%), Positives = 85/94 (90%)

Query: 3   RLPRNFGRALIWIYRHTLSPLVGYNCRHLPTCSVYGDEAIERFGLWGGGWMTLARLLRCQ 62
           RLPRN GRALIWIYRHTLSPLVG+NCRHLPTCS YGDEAI RFGLWGGGWMTLAR+LRC+
Sbjct: 23  RLPRNAGRALIWIYRHTLSPLVGFNCRHLPTCSAYGDEAIARFGLWGGGWMTLARILRCR 82

Query: 63  PWGTSGIDNVPLTKPPGARWYLPWSYGRWRGVNE 96
           PWGTSGIDNVP+ KP GA WY PW YGRWRGVN 
Sbjct: 83  PWGTSGIDNVPVAKPSGATWYRPWRYGRWRGVNA 116


>ref|YP_570376.1| hypothetical protein RPD_3251 [Rhodopseudomonas palustris BisB5]
 gb|ABE40475.1| protein of unknown function DUF37 [Rhodopseudomonas palustris
           BisB5]
          Length = 136

 Score =  166 bits (421), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 78/96 (81%), Positives = 83/96 (86%)

Query: 1   MRRLPRNFGRALIWIYRHTLSPLVGYNCRHLPTCSVYGDEAIERFGLWGGGWMTLARLLR 60
           ++R PRN GR LIW+YRHTLSPLVGY+CRHLPTCSVYGDEAI RFGLW GGWMTLARLLR
Sbjct: 20  IKRAPRNAGRGLIWLYRHTLSPLVGYHCRHLPTCSVYGDEAIGRFGLWAGGWMTLARLLR 79

Query: 61  CQPWGTSGIDNVPLTKPPGARWYLPWSYGRWRGVNE 96
           C P+GTSGIDNVP   PPGA WYLPW Y RWRGVN 
Sbjct: 80  CNPYGTSGIDNVPAAAPPGAHWYLPWRYARWRGVNA 115


>ref|YP_781263.1| hypothetical protein RPE_2343 [Rhodopseudomonas palustris BisA53]
 sp|Q07P51.1|Y2343_RHOP5 RecName: Full=UPF0161 protein RPE_2343
 gb|ABJ06283.1| protein of unknown function DUF37 [Rhodopseudomonas palustris
           BisA53]
          Length = 109

 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 80/94 (85%), Positives = 83/94 (88%)

Query: 3   RLPRNFGRALIWIYRHTLSPLVGYNCRHLPTCSVYGDEAIERFGLWGGGWMTLARLLRCQ 62
           RLPR  GR  IW+YRHTLSPLVGY+CRHLPTCSVYGDEAI RFGLW GGWMTLARLLRCQ
Sbjct: 16  RLPRQAGRGAIWLYRHTLSPLVGYHCRHLPTCSVYGDEAIGRFGLWAGGWMTLARLLRCQ 75

Query: 63  PWGTSGIDNVPLTKPPGARWYLPWSYGRWRGVNE 96
           PWGTSGIDNVP   P GARWYLPW YGRWRGVN+
Sbjct: 76  PWGTSGIDNVPAEPPGGARWYLPWRYGRWRGVND 109