BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0022.p (369 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772159.1| hypothetical protein bll5519 [Bradyrhizobium ja... 578 e-163 ref|YP_576937.1| hypothetical protein Nham_1660 [Nitrobacter ham... 528 e-148 ref|YP_001241079.1| hypothetical protein BBta_5180 [Bradyrhizobi... 521 e-145 ref|YP_001205030.1| hypothetical protein BRADO2987 [Bradyrhizobi... 516 e-144 ref|YP_781275.1| hypothetical protein RPE_2355 [Rhodopseudomonas... 516 e-144 >ref|NP_772159.1| hypothetical protein bll5519 [Bradyrhizobium japonicum USDA 110] dbj|BAC50784.1| bll5519 [Bradyrhizobium japonicum USDA 110] Length = 391 Score = 578 bits (1489), Expect = e-163, Method: Compositional matrix adjust. Identities = 294/369 (79%), Positives = 330/369 (89%), Gaps = 2/369 (0%) Query: 1 LARAWLISDLTEDDRIAAEGALLMLLDDPSPLVRQAMAEVFARSADAPAAIVQALSADQP 60 LARAWLISDL+ DDR+AAEGALLMLLDDPSPLVRQAMAE FARS DAPAAIV+ALSADQP Sbjct: 25 LARAWLISDLSHDDRVAAEGALLMLLDDPSPLVRQAMAEAFARSTDAPAAIVRALSADQP 84 Query: 61 AIALPVLEHSPLLIDADLVDIVATGSDEMQCAIARRINLPASVAAAIAEVGSAAAALELI 120 +ALPVLEHSPLLIDADLVDIVATG+DE+QCA+ARR+ LP SV AAIAEVG AAAALELI Sbjct: 85 TVALPVLEHSPLLIDADLVDIVATGNDEVQCAVARRVALPVSVCAAIAEVGCAAAALELI 144 Query: 121 ENPYAGLAPFSWDRIVERHGHLAAIRESMLQLEDLPSATRLALVAKLSDTLAQFVVARNW 180 ENP+A LAPFSW+RIV+RHGHLAAIRE+ML LEDLP+ATR ALVAKLS+TLAQFVVARNW Sbjct: 145 ENPHAELAPFSWNRIVDRHGHLAAIREAMLVLEDLPAATRAALVAKLSETLAQFVVARNW 204 Query: 181 LGSDRADRIAGEARERSTVNIAARAFGDDMQNLIMHLRATGQLTAGLILRALLSGNLDLF 240 L +DRADRI EAR+RST+NIAAR+ G+DMQ L+ HLR TGQLTAGLILRALLS NLDLF Sbjct: 205 LSADRADRITIEARDRSTINIAARSRGEDMQGLVHHLRVTGQLTAGLILRALLSSNLDLF 264 Query: 241 GAALAELSGLPYGRVSALLNDRGGNGLQALLRRAGLPESTYAAFRVALEASHEVGYVDSG 300 AALAEL+ LP RV+ALL+DRGGN L ALLRRAGLPE+T+AAF+VAL+A HE G+VDS Sbjct: 265 DAALAELADLPLARVTALLHDRGGNSLHALLRRAGLPEATFAAFQVALDACHEQGFVDSD 324 Query: 301 DGAARLHRRMVERVLTHCETDHSAAEPLLILLRRFATESAREDARMFCEELAAEDAIAVL 360 DGA RL RRMVERVLTHCETD A EPL++LLRRFATESARE+AR+FC+EL A+D + Sbjct: 325 DGAVRLRRRMVERVLTHCETDRGATEPLMVLLRRFATESAREEARLFCDELVADDTVD-- 382 Query: 361 PYDDDLIAA 369 P+ DDLIAA Sbjct: 383 PFYDDLIAA 391 >ref|YP_576937.1| hypothetical protein Nham_1660 [Nitrobacter hamburgensis X14] gb|ABE62477.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 486 Score = 528 bits (1359), Expect = e-148, Method: Compositional matrix adjust. Identities = 284/365 (77%), Positives = 312/365 (85%), Gaps = 2/365 (0%) Query: 1 LARAWLISDLTEDDRIAAEGALLMLLDDPSPLVRQAMAEVFARSADAPAAIVQALSADQP 60 LARAWLISDL++DDR AAEG LLM LDDPSPLVRQAMAEVFARSA APAAIVQALS DQP Sbjct: 25 LARAWLISDLSDDDRAAAEGGLLMQLDDPSPLVRQAMAEVFARSATAPAAIVQALSVDQP 84 Query: 61 AIALPVLEHSPLLIDADLVDIVATGSDEMQCAIARRINLPASVAAAIAEVGSAAAALELI 120 ++A+ VLEHSPLLIDADLVDIVATGS E+QCA+ARR +P SV AAIAEVGSAAAALELI Sbjct: 85 SVAISVLEHSPLLIDADLVDIVATGSCEVQCAVARRARVPVSVCAAIAEVGSAAAALELI 144 Query: 121 ENPYAGLAPFSWDRIVERHGHLAAIRESMLQLEDLPSATRLALVAKLSDTLAQFVVARNW 180 ENP A LAP SW RIVERHGHLAAIRESML L+DLP+ATRLALVAKLSDTLAQFVVARNW Sbjct: 145 ENPGADLAPLSWARIVERHGHLAAIRESMLALDDLPAATRLALVAKLSDTLAQFVVARNW 204 Query: 181 LGSDRADRIAGEARERSTVNIAARAFGDDMQNLIMHLRATGQLTAGLILRALLSGNLDLF 240 LG+DRA R A +AR+RS VNIAARA DDM+ L+ HLRATGQLTAGLILRALLSGNLDLF Sbjct: 205 LGADRASRAASDARDRSIVNIAARARDDDMRGLVAHLRATGQLTAGLILRALLSGNLDLF 264 Query: 241 GAALAELSGLPYGRVSALLNDRGGNGLQALLRRAGLPESTYAAFRVALEASHEVGYVDSG 300 AL ELSGLP RV+AL++DRGG L ALL RAGLPEST+ AFR ALEA E+G+V + Sbjct: 265 DHALVELSGLPLSRVAALVHDRGGASLPALLTRAGLPESTFPAFRAALEARDEIGFVGTV 324 Query: 301 DGAARLHRRMVERVLTHCETDHS-AAEPLLILLRRFATESAREDARMFCEELAAEDAIAV 359 GA RL RRMVERVLT CET + +EPLLILLRRFATESARE+AR+FC+EL AE A A Sbjct: 325 GGATRLRRRMVERVLTMCETAPTEVSEPLLILLRRFATESAREEARVFCDELVAE-AAAE 383 Query: 360 LPYDD 364 YD+ Sbjct: 384 PAYDE 388 >ref|YP_001241079.1| hypothetical protein BBta_5180 [Bradyrhizobium sp. BTAi1] gb|ABQ37173.1| hypothetical protein BBta_5180 [Bradyrhizobium sp. BTAi1] Length = 391 Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust. Identities = 269/369 (72%), Positives = 315/369 (85%), Gaps = 2/369 (0%) Query: 1 LARAWLISDLTEDDRIAAEGALLMLLDDPSPLVRQAMAEVFARSADAPAAIVQALSADQP 60 LARAWL+SDL+++DR AAEGALLMLLDDPSPLVRQAMAEVFARSADAPAAIVQAL+ DQP Sbjct: 25 LARAWLLSDLSDEDRGAAEGALLMLLDDPSPLVRQAMAEVFARSADAPAAIVQALATDQP 84 Query: 61 AIALPVLEHSPLLIDADLVDIVATGSDEMQCAIARRINLPASVAAAIAEVGSAAAALELI 120 ++A+ +LEHSPLLIDADLVDIVATG+ E QCA+ARRI LPA V AAIAEVGSAAAALELI Sbjct: 85 SVAVIILEHSPLLIDADLVDIVATGNSETQCAVARRIGLPAPVCAAIAEVGSAAAALELI 144 Query: 121 ENPYAGLAPFSWDRIVERHGHLAAIRESMLQLEDLPSATRLALVAKLSDTLAQFVVARNW 180 EN YA L PFSWDRIVERHGHLAAIRE+ML L+DLP+ATR ALV KLS+TLAQFVVARNW Sbjct: 145 ENAYAELPPFSWDRIVERHGHLAAIREAMLVLDDLPAATRAALVDKLSETLAQFVVARNW 204 Query: 181 LGSDRADRIAGEARERSTVNIAARAFGDDMQNLIMHLRATGQLTAGLILRALLSGNLDLF 240 L +DRA RI EAR+RST+ IAAR+ G++++ L+ HLRAT QLTAGLILRALLSGN++LF Sbjct: 205 LSADRAGRITSEARDRSTITIAARSGGEELRGLVQHLRATAQLTAGLILRALLSGNVELF 264 Query: 241 GAALAELSGLPYGRVSALLNDRGGNGLQALLRRAGLPESTYAAFRVALEASHEVGYVDSG 300 AL+EL+ +P RVS+LLNDRG LQ LLR+AG+P++T+ AF +AL+ E G+ D+ Sbjct: 265 ETALSELADMPRARVSSLLNDRGRASLQGLLRKAGIPDTTFEAFAIALDVCRENGFADTL 324 Query: 301 DGAARLHRRMVERVLTHCETDHSAAEPLLILLRRFATESAREDARMFCEELAAEDAIAVL 360 GAA L R+MVERVLTHC TD AAEPLLILLRRFATESAR++AR FC+E+ AED +A L Sbjct: 325 SGAAILRRKMVERVLTHCATDRDAAEPLLILLRRFATESARDEAREFCDEVIAEDFVAGL 384 Query: 361 PYDDDLIAA 369 + LIAA Sbjct: 385 EF--GLIAA 391 >ref|YP_001205030.1| hypothetical protein BRADO2987 [Bradyrhizobium sp. ORS 278] emb|CAL76793.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 391 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 271/369 (73%), Positives = 309/369 (83%), Gaps = 2/369 (0%) Query: 1 LARAWLISDLTEDDRIAAEGALLMLLDDPSPLVRQAMAEVFARSADAPAAIVQALSADQP 60 LARAWL+SDL E+DR AAEGALLMLLDDPSPLVRQAMAEVFARS DAPAAIVQAL+ DQ Sbjct: 25 LARAWLVSDLGEEDRFAAEGALLMLLDDPSPLVRQAMAEVFARSEDAPAAIVQALATDQA 84 Query: 61 AIALPVLEHSPLLIDADLVDIVATGSDEMQCAIARRINLPASVAAAIAEVGSAAAALELI 120 ++A +LEHSPLL+DADLVDIVA G+ E QCAIARRI +PA V AAIAEVGSAAAALELI Sbjct: 85 SVAAIILEHSPLLLDADLVDIVALGNSETQCAIARRIGVPAPVCAAIAEVGSAAAALELI 144 Query: 121 ENPYAGLAPFSWDRIVERHGHLAAIRESMLQLEDLPSATRLALVAKLSDTLAQFVVARNW 180 EN YA LAPFSWDRIVERHGHLAAIRE+ML L+DLP+ATR ALV KLS TLAQFVVARNW Sbjct: 145 ENAYAELAPFSWDRIVERHGHLAAIREAMLVLDDLPAATRAALVDKLSQTLAQFVVARNW 204 Query: 181 LGSDRADRIAGEARERSTVNIAARAFGDDMQNLIMHLRATGQLTAGLILRALLSGNLDLF 240 L ++RA RI EAR+RST+ IA+R G++++ L+ HLRAT QLTAGLILRALLSGN++LF Sbjct: 205 LSAERAGRITDEARDRSTITIASRTRGEELRGLVQHLRATSQLTAGLILRALLSGNVELF 264 Query: 241 GAALAELSGLPYGRVSALLNDRGGNGLQALLRRAGLPESTYAAFRVALEASHEVGYVDSG 300 AL+ELSGLP GRVSALL DRG LQ LLR+AG+P++T+ AF +ALE E G+ DS Sbjct: 265 EIALSELSGLPRGRVSALLKDRGRASLQGLLRKAGIPDTTFDAFIIALEVCRENGFADSL 324 Query: 301 DGAARLHRRMVERVLTHCETDHSAAEPLLILLRRFATESAREDARMFCEELAAEDAIAVL 360 GAA L R+MVERVLTHC TD AAEPLLILLRRFATESAR+ AR FC+E+ AED +A L Sbjct: 325 SGAAILRRKMVERVLTHCATDRDAAEPLLILLRRFATESARDAAREFCDEVMAEDFVAGL 384 Query: 361 PYDDDLIAA 369 + LIAA Sbjct: 385 EF--GLIAA 391 >ref|YP_781275.1| hypothetical protein RPE_2355 [Rhodopseudomonas palustris BisA53] gb|ABJ06295.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 391 Score = 516 bits (1328), Expect = e-144, Method: Compositional matrix adjust. Identities = 269/359 (74%), Positives = 304/359 (84%) Query: 1 LARAWLISDLTEDDRIAAEGALLMLLDDPSPLVRQAMAEVFARSADAPAAIVQALSADQP 60 LARAWL+SDL+ DD AAEGALLMLLDD SPLVRQAMAEVF+RS +APAAI++ALS DQP Sbjct: 25 LARAWLVSDLSLDDLEAAEGALLMLLDDRSPLVRQAMAEVFSRSTEAPAAIIRALSTDQP 84 Query: 61 AIALPVLEHSPLLIDADLVDIVATGSDEMQCAIARRINLPASVAAAIAEVGSAAAALELI 120 ++ALPVLE SPLLIDADLVDIVATG+ E QCAIARR+ LPA V AAIAEVGSAAAALELI Sbjct: 85 SVALPVLEFSPLLIDADLVDIVATGNSETQCAIARRVKLPAPVCAAIAEVGSAAAALELI 144 Query: 121 ENPYAGLAPFSWDRIVERHGHLAAIRESMLQLEDLPSATRLALVAKLSDTLAQFVVARNW 180 ENP+A LAPFSWDRIVERHGHLAAIRESML LEDLP+ATR+ALVAKLSDTLAQFVVARNW Sbjct: 145 ENPHAELAPFSWDRIVERHGHLAAIRESMLVLEDLPAATRMALVAKLSDTLAQFVVARNW 204 Query: 181 LGSDRADRIAGEARERSTVNIAARAFGDDMQNLIMHLRATGQLTAGLILRALLSGNLDLF 240 L ++RA+R GEA +RS V +A R+ DDMQ L+ HLR TG LT GLILR+LLSGN +LF Sbjct: 205 LSAERAERAVGEAMDRSIVVVATRSRDDDMQGLMRHLRLTGHLTTGLILRSLLSGNSELF 264 Query: 241 GAALAELSGLPYGRVSALLNDRGGNGLQALLRRAGLPESTYAAFRVALEASHEVGYVDSG 300 AL EL+ LP RV+ALL+D G L ALL+RAGLPE+T+ AFR ALEA E+G+VDSG Sbjct: 265 HHALVELTELPSARVAALLHDGAGASLNALLKRAGLPEATHPAFRAALEAIREIGFVDSG 324 Query: 301 DGAARLHRRMVERVLTHCETDHSAAEPLLILLRRFATESAREDARMFCEELAAEDAIAV 359 DG + L RRMVERVLT CETD AA PLLILLRRFATESARE+A FC+EL AEDA+ + Sbjct: 325 DGVSGLRRRMVERVLTRCETDAEAAAPLLILLRRFATESAREEASRFCDELLAEDALDI 383