BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0018.p (536 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772154.1| hypothetical protein bll5514 [Bradyrhizobium ja... 721 0.0 ref|YP_001241073.1| putative peptidase S10, serine carboxypeptid... 713 0.0 ref|YP_532979.1| peptidase S10, serine carboxypeptidase [Rhodops... 696 0.0 ref|YP_001205036.1| putative peptidase S10, serine carboxypeptid... 694 0.0 ref|YP_567519.1| peptidase S10, serine carboxypeptidase [Rhodops... 678 0.0 >ref|NP_772154.1| hypothetical protein bll5514 [Bradyrhizobium japonicum USDA 110] dbj|BAC50779.1| bll5514 [Bradyrhizobium japonicum USDA 110] Length = 520 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/537 (68%), Positives = 423/537 (78%), Gaps = 22/537 (4%) Query: 4 MANSLATRLAAALLVACLATA--ARADDETPQPSPSPSVQAPGGQNPAGQNPSGQKGRAG 61 M SL +R L V+ A A ARADD PQP + A G S Q+ Sbjct: 1 MTTSLPSRAILVLAVSAFALAGLARADDP-PQPRSETAAPAGQKGGRGGGTQSAQQ---- 55 Query: 62 RGGEAGSGANAAASGSTAEQHRLPPDSTTKQSVALPNRTLNFSATAGSIRVFDDKGEPLA 121 AS S AE HRLP DSTTKQ++ LP RTLNF+ATAGSIRVFD KGEPLA Sbjct: 56 ------------ASPSAAEPHRLPSDSTTKQTLDLPGRTLNFAATAGSIRVFDGKGEPLA 103 Query: 122 DIAYTSYQLDGAEKANRPVTFLFNGGPGSASAWLQLGNIWPWRLPFDG-AVS-SAAPELQ 179 DIAYTSY+LDG+++A RPVTFLFNGGPG++SAWLQ G PWRLP DG A+S SA+P+++ Sbjct: 104 DIAYTSYELDGSDRATRPVTFLFNGGPGASSAWLQFGAAGPWRLPLDGEALSPSASPDVK 163 Query: 180 ANADTWLDFTDLVFLDPVGTGYSRFVTTSEEARKRFFTVDGDANSVALVIRRWLEKYDRL 239 NA+TWLDFTDLVF+DPVGTGYSRFV T E+ARK F++VDGD N++ALVIRRWLE++DRL Sbjct: 164 PNAETWLDFTDLVFIDPVGTGYSRFVATGEDARKSFYSVDGDVNAIALVIRRWLERHDRL 223 Query: 240 TSPKYLVGESYGGIRGPKVVRNLQMQQGVGVRGLVLISPVLDFREYTGSSLLQYVASLPT 299 SPKY+ GESYGGIRGPKVVR LQ+Q GVGVRGL+L+SP+LDFRE+TG+SLLQYVA+LP+ Sbjct: 224 VSPKYVAGESYGGIRGPKVVRQLQVQHGVGVRGLILVSPLLDFREFTGTSLLQYVATLPS 283 Query: 300 MAAVARQAKGPVTREDLADVESYARGDFLLDLVRGQADTEATTRLADKVASLTGIDQAVS 359 AVAR+AKGPV R DLADVE+YARG+FL DLV+G+AD EAT RLADKVA LTGID+AVS Sbjct: 284 YVAVAREAKGPVKRADLADVEAYARGEFLADLVKGEADKEATNRLADKVAELTGIDRAVS 343 Query: 360 RRLAGRFDIGEFRREFDRKNGKVTGRYDASVEGFDPYPDSSYFRFNDPSGDPLMAPLTSA 419 RRLAGRFDIGEFRREFDRKNGKVTGRYDASV G DPYPDS RF DPSGD L APLTSA Sbjct: 344 RRLAGRFDIGEFRREFDRKNGKVTGRYDASVRGLDPYPDSGNSRFGDPSGDALQAPLTSA 403 Query: 420 AVDLTTRKLNWRPDGSYHLLSESVNKAWEFGHGISPAESVTQLRQALALDPNLKLLVGHG 479 AVD+ TRKLNWRPDGSY +L+ +V W+FG GI+P +SV+ LRQ LA D L +LV HG Sbjct: 404 AVDVLTRKLNWRPDGSYEVLNGAVEGQWDFGRGINPPQSVSDLRQVLAADAKLNVLVAHG 463 Query: 480 LFDLATPYFASKIILDQLPAFAGPSRTRLAVYPGGHMFYSRDGSRQAFRKEVEALMR 536 LFDLATPYF SK +LDQLPAFA R + VYPGGHMFYSRDGSRQA R EVE L+R Sbjct: 464 LFDLATPYFGSKRVLDQLPAFA-TQRIKFVVYPGGHMFYSRDGSRQALRGEVEGLIR 519 >ref|YP_001241073.1| putative peptidase S10, serine carboxypeptidase [Bradyrhizobium sp. BTAi1] gb|ABQ37167.1| putative Peptidase S10, serine carboxypeptidase [Bradyrhizobium sp. BTAi1] Length = 534 Score = 713 bits (1840), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/483 (72%), Positives = 405/483 (83%), Gaps = 6/483 (1%) Query: 60 AGRGGEAGSGAN----AAASGSTAEQHRLPPDSTTKQSVALPNRTLNFSATAGSIRVFDD 115 +G G +GS N A AS S AEQH+LP DSTT Q++ LP RTL+FSATAGSIR+FDD Sbjct: 52 SGSGPRSGSAGNRAANAPASPSAAEQHKLPADSTTSQTIELPGRTLSFSATAGSIRLFDD 111 Query: 116 KGEPLADIAYTSYQLDGAEKANRPVTFLFNGGPGSASAWLQLGNIWPWRLPFDGA--VSS 173 K EP ADIAYTSYQL+G E+A+RPVTF FNGGPG++SA+LQLGN PWR+ D A S Sbjct: 112 KSEPQADIAYTSYQLEGTERASRPVTFFFNGGPGASSAYLQLGNAGPWRISIDAASITPS 171 Query: 174 AAPELQANADTWLDFTDLVFLDPVGTGYSRFVTTSEEARKRFFTVDGDANSVALVIRRWL 233 + P+L NA+TWLDFTDLVF+DPVGTGYSRFV + +E RKRFF+VDGD S+ALV+RRWL Sbjct: 172 SKPDLMPNAETWLDFTDLVFIDPVGTGYSRFVASGDEVRKRFFSVDGDVRSLALVVRRWL 231 Query: 234 EKYDRLTSPKYLVGESYGGIRGPKVVRNLQMQQGVGVRGLVLISPVLDFREYTGSSLLQY 293 EK+DRL SPK++ ESYGGIRGPK+V NLQ QG+G+ GL+L+SP++DFR+Y+GSSL+QY Sbjct: 232 EKHDRLASPKFIAAESYGGIRGPKIVNNLQHDQGIGINGLILLSPLMDFRDYSGSSLMQY 291 Query: 294 VASLPTMAAVARQAKGPVTREDLADVESYARGDFLLDLVRGQADTEATTRLADKVASLTG 353 VASLP+ AAVA+Q KGPVTR DLADVE YA GDFLLDLV+G+AD +AT RLADKVASLTG Sbjct: 292 VASLPSYAAVAKQLKGPVTRADLADVERYASGDFLLDLVKGEADLDATNRLADKVASLTG 351 Query: 354 IDQAVSRRLAGRFDIGEFRREFDRKNGKVTGRYDASVEGFDPYPDSSYFRFNDPSGDPLM 413 ID AVSRRLAGRFD+ EFRREFDRKNG++ GRYD SV G DPYPDSS R DPSGD L Sbjct: 352 IDPAVSRRLAGRFDVSEFRREFDRKNGRIAGRYDGSVLGIDPYPDSSRSRSADPSGDVLT 411 Query: 414 APLTSAAVDLTTRKLNWRPDGSYHLLSESVNKAWEFGHGISPAESVTQLRQALALDPNLK 473 APLTSAAV+LTTRKLNWRPDGSY LLS +VN++W+FG GISP ES ++LRQ LALDP LK Sbjct: 412 APLTSAAVELTTRKLNWRPDGSYELLSGAVNRSWDFGRGISPPESTSELRQILALDPKLK 471 Query: 474 LLVGHGLFDLATPYFASKIILDQLPAFAGPSRTRLAVYPGGHMFYSRDGSRQAFRKEVEA 533 LLVGHGLFDLATPY+ SKI+LDQLPAFA P R +L VYPGGHMFYSRD +RQAFR E EA Sbjct: 472 LLVGHGLFDLATPYYGSKILLDQLPAFARPPRVKLVVYPGGHMFYSRDDARQAFRGEAEA 531 Query: 534 LMR 536 LM+ Sbjct: 532 LMK 534 >ref|YP_532979.1| peptidase S10, serine carboxypeptidase [Rhodopseudomonas palustris BisB18] gb|ABD88660.1| peptidase S10, serine carboxypeptidase [Rhodopseudomonas palustris BisB18] Length = 522 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/476 (71%), Positives = 397/476 (83%), Gaps = 5/476 (1%) Query: 63 GGEAGSGANAAASGSTAEQHRLPPDSTTKQSVALPNRTLNFSATAGSIRVFDDKGEPLAD 122 G + SG++ A S A+QHRLPPDS T+ ++L RTL+FSATAGSIR+FDDKGEP AD Sbjct: 43 GAPSQSGSSPA---SAADQHRLPPDSITQHKLSLAGRTLSFSATAGSIRLFDDKGEPQAD 99 Query: 123 IAYTSYQLDGAEKANRPVTFLFNGGPGSASAWLQLGNIWPWRLPFD--GAVSSAAPELQA 180 IAYTSYQ DG E +RPVTFLFNGGPG++SAWLQ G PWRL FD G +SA PELQ Sbjct: 100 IAYTSYQRDGGEPGSRPVTFLFNGGPGASSAWLQFGAAGPWRLTFDAEGPSASATPELQP 159 Query: 181 NADTWLDFTDLVFLDPVGTGYSRFVTTSEEARKRFFTVDGDANSVALVIRRWLEKYDRLT 240 NA+TWLDFTDLVF+DPVGTGYSRFV + E RKRF++VDGD S+ALVIRRWLEK DRL Sbjct: 160 NAETWLDFTDLVFIDPVGTGYSRFVASGEAVRKRFYSVDGDVASIALVIRRWLEKSDRLL 219 Query: 241 SPKYLVGESYGGIRGPKVVRNLQMQQGVGVRGLVLISPVLDFREYTGSSLLQYVASLPTM 300 SPK++ GESYGGIRGPK+V +LQ +QG+GV+GL+L+SP+ DFR+Y+GSSLLQYVA LP+M Sbjct: 220 SPKFVAGESYGGIRGPKIVHDLQTEQGIGVKGLILVSPLFDFRDYSGSSLLQYVARLPSM 279 Query: 301 AAVARQAKGPVTREDLADVESYARGDFLLDLVRGQADTEATTRLADKVASLTGIDQAVSR 360 AA ARQ K PV R D+ADVE+YA GDFL DL++GQAD EAT+RLAD+VA+LTGID +VSR Sbjct: 280 AATARQLKAPVGRADVADVEAYAGGDFLRDLLKGQADAEATSRLADRVAALTGIDPSVSR 339 Query: 361 RLAGRFDIGEFRREFDRKNGKVTGRYDASVEGFDPYPDSSYFRFNDPSGDPLMAPLTSAA 420 RLAGRFD+ EFRREFDR+NG+VTGRYDASV GFDPYPDS+ RF+DPS +PL+APLTSAA Sbjct: 340 RLAGRFDVSEFRREFDRRNGRVTGRYDASVTGFDPYPDSNAARFDDPSLEPLLAPLTSAA 399 Query: 421 VDLTTRKLNWRPDGSYHLLSESVNKAWEFGHGISPAESVTQLRQALALDPNLKLLVGHGL 480 +D T R+LNWRPDGSY LL+ +V AW+FG G P ESV+QLRQ LALDP KLLV HGL Sbjct: 400 IDHTARRLNWRPDGSYRLLNGAVAGAWDFGRGRHPPESVSQLRQVLALDPTFKLLVAHGL 459 Query: 481 FDLATPYFASKIILDQLPAFAGPSRTRLAVYPGGHMFYSRDGSRQAFRKEVEALMR 536 FDLATPYFASKIILDQLPA+A R +LAVYPGGHMFY RD SRQA R EV A+++ Sbjct: 460 FDLATPYFASKIILDQLPAYASTDRVQLAVYPGGHMFYWRDASRQALRAEVAAMIQ 515 >ref|YP_001205036.1| putative peptidase S10, serine carboxypeptidase signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL76799.1| putative Peptidase S10, serine carboxypeptidase; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 523 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/528 (68%), Positives = 417/528 (78%), Gaps = 21/528 (3%) Query: 12 LAAALLVACLATAARADDETPQPSPSPSVQAPGGQNPAGQNPSGQKGRAGRGGEAGSGAN 71 LA AL + A RA D P +N A P RGG AG+ Sbjct: 14 LAIALTLLGAGPALRAQDAPPAAQ----------ENAAASGP--------RGGSAGTRVA 55 Query: 72 AAASGSTA-EQHRLPPDSTTKQSVALPNRTLNFSATAGSIRVFDDKGEPLADIAYTSYQL 130 +A + +A EQH+LP DSTT Q+V LP RTL F+ATAGSIR+FDDKGEP ADIAYTSYQL Sbjct: 56 SAPASPSAAEQHKLPADSTTTQTVDLPGRTLTFTATAGSIRLFDDKGEPQADIAYTSYQL 115 Query: 131 DGAEKANRPVTFLFNGGPGSASAWLQLGNIWPWRLPFDGA--VSSAAPELQANADTWLDF 188 +G E+ +RPVTF NGGPG++SA+LQLGN PWR+ D A S+ PEL NADTWLDF Sbjct: 116 NGTERGSRPVTFFLNGGPGASSAYLQLGNAGPWRIGIDAASVTPSSKPELTPNADTWLDF 175 Query: 189 TDLVFLDPVGTGYSRFVTTSEEARKRFFTVDGDANSVALVIRRWLEKYDRLTSPKYLVGE 248 TDLVF+DPVGTGYSRFV T +E RKRFF+VDGD S++ V+RRWLEK+DRL SPK++ E Sbjct: 176 TDLVFIDPVGTGYSRFVATGDEVRKRFFSVDGDVRSLSQVMRRWLEKHDRLASPKFITAE 235 Query: 249 SYGGIRGPKVVRNLQMQQGVGVRGLVLISPVLDFREYTGSSLLQYVASLPTMAAVARQAK 308 SYGGIRGPK+VRNLQ QGVG+ GL+L+SP+LDFR+Y+GSSLLQYVASLP+ AAVARQ K Sbjct: 236 SYGGIRGPKIVRNLQQDQGVGINGLILLSPLLDFRDYSGSSLLQYVASLPSYAAVARQMK 295 Query: 309 GPVTREDLADVESYARGDFLLDLVRGQADTEATTRLADKVASLTGIDQAVSRRLAGRFDI 368 GPVTR DLA+VE YA GDFLLDLV+G+ADTEAT RLAD+VA+LTGIDQAVSRRLAGRFD Sbjct: 296 GPVTRADLAEVERYASGDFLLDLVKGEADTEATNRLADQVAALTGIDQAVSRRLAGRFDD 355 Query: 369 GEFRREFDRKNGKVTGRYDASVEGFDPYPDSSYFRFNDPSGDPLMAPLTSAAVDLTTRKL 428 EFRREFDRKNG+VTGRYD SV G DP+PDSS R +DPSGD L APLT AAV+LTTRKL Sbjct: 356 SEFRREFDRKNGRVTGRYDGSVLGIDPFPDSSRSRSSDPSGDVLTAPLTGAAVELTTRKL 415 Query: 429 NWRPDGSYHLLSESVNKAWEFGHGISPAESVTQLRQALALDPNLKLLVGHGLFDLATPYF 488 NWRPDGSY LLS +VN++W+FG GISP ES + +RQ LALDP LKLLVGHGLFDLATPY+ Sbjct: 416 NWRPDGSYELLSGAVNQSWDFGRGISPPESSSDIRQILALDPKLKLLVGHGLFDLATPYY 475 Query: 489 ASKIILDQLPAFAGPSRTRLAVYPGGHMFYSRDGSRQAFRKEVEALMR 536 SKI+LDQLPAFA P R +L VYPGGHMFYSRD +R+AFR E EALM+ Sbjct: 476 GSKIVLDQLPAFAQPPRVKLVVYPGGHMFYSRDDARKAFRGEAEALMK 523 >ref|YP_567519.1| peptidase S10, serine carboxypeptidase [Rhodopseudomonas palustris BisB5] gb|ABE37618.1| peptidase S10, serine carboxypeptidase [Rhodopseudomonas palustris BisB5] Length = 573 Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/478 (68%), Positives = 394/478 (82%), Gaps = 3/478 (0%) Query: 61 GRGGEAGSGANAAASGSTAEQHRLPPDSTTKQSVALPNRTLNFSATAGSIRVFDDKGEPL 120 G+ GS AAA+ S AEQHRLP DS T+ ++ALP R+L+F+ATAGSIR+F+DK EP Sbjct: 97 GKSETGGSRGKAAAASSDAEQHRLPADSVTRHTLALPGRSLSFAATAGSIRLFNDKAEPQ 156 Query: 121 ADIAYTSYQLDGAEKANRPVTFLFNGGPGSASAWLQLGNIWPWRLPFDG--AVSSAAPEL 178 ADIAYT+YQLD AE RPVTFLFNGGPG++SAWLQLG PWRLP G AV+SA P L Sbjct: 157 ADIAYTAYQLDNAEARTRPVTFLFNGGPGASSAWLQLGAAGPWRLPIFGEAAVASATPAL 216 Query: 179 QANADTWLDFTDLVFLDPVGTGYSRFVTTSEEARKRFFTVDGDANSVALVIRRWLEKYDR 238 Q NA+TWLDFTDLVF+DPVGTGYSR V + ++ RK+F++VDGD +++AL IRRWLEK+DR Sbjct: 217 QPNAETWLDFTDLVFIDPVGTGYSRLVASGDDVRKQFYSVDGDVDAIALTIRRWLEKHDR 276 Query: 239 LTSPKYLVGESYGGIRGPKVVRNLQMQQGVGVRGLVLISPVLDFREYTGSSLLQYVASLP 298 L SPKY+ GESYGGIRGP+VVRNLQ +QGVGV+GL+L+SP+LDFREY+GSSLLQYVA LP Sbjct: 277 LLSPKYVGGESYGGIRGPRVVRNLQTRQGVGVKGLILVSPLLDFREYSGSSLLQYVARLP 336 Query: 299 TMAAVARQAKGPVTREDLADVESYARGDFLLDLVRGQADTEATTRLADKVASLTGIDQAV 358 +MAA ARQ KGPVTR DL DVE+YARG+FL DL++G+AD AT RLAD+VA+LTGID AV Sbjct: 337 SMAAAARQQKGPVTRTDLTDVEAYARGEFLADLIKGEADQAATNRLADRVATLTGIDPAV 396 Query: 359 SRRLAGRFDIGEFRREFDRKNGKVTGRYDASVEGFDPYPDSSYFRFNDPSGDPLMAPLTS 418 SRRLAGR D EF+REFDR NGKVTGR+DASV GFDP+PDSS +F+DPS D L+APLTS Sbjct: 397 SRRLAGRLDTSEFQREFDRANGKVTGRFDASVLGFDPFPDSSDAQFSDPSADSLIAPLTS 456 Query: 419 AAVDLTTRKLNWRPDGSYHLLSESVNKAWEFGHGISPAESVTQLRQALALDPNLKLLVGH 478 AA +LT L WRPDGSYHLL+ SV + W+FG G +P ES+TQLR+ LA+DP L++LV H Sbjct: 457 AAAELTRNPLQWRPDGSYHLLNSSVAQQWDFGRGRNPVESLTQLREILAVDPKLQVLVTH 516 Query: 479 GLFDLATPYFASKIILDQLPAFAGPSRTRLAVYPGGHMFYSRDGSRQAFRKEVEALMR 536 GLFDLATPYFAS+I +DQLP FA R +L +PGGHM Y+RD +R+A R EV A+M+ Sbjct: 517 GLFDLATPYFASQIAIDQLPPFAS-KRIKLVTWPGGHMTYARDDARKALRGEVGAMMK 573