BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0028.0010.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001411951.1| protoheme IX farnesyltransferase [Parvibacul... 358 5e-97 ref|YP_003692538.1| protoheme IX farnesyltransferase [Starkeya n... 341 8e-92 ref|ZP_02186258.1| putative protoheme IX farnesyltransferase (he... 341 1e-91 ref|NP_107797.1| protoheme IX farnesyltransferase [Mesorhizobium... 339 4e-91 ref|YP_004305122.1| Protoheme IX farnesyltransferase 2 [Polymorp... 338 5e-91 >ref|YP_001411951.1| protoheme IX farnesyltransferase [Parvibaculum lavamentivorans DS-1] sp|A7HQW1.1|COXX_PARL1 RecName: Full=Protoheme IX farnesyltransferase; AltName: Full=Heme B farnesyltransferase; AltName: Full=Heme O synthase gb|ABS62294.1| protoheme IX farnesyltransferase [Parvibaculum lavamentivorans DS-1] Length = 318 Score = 358 bits (919), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 182/280 (65%), Positives = 221/280 (78%), Gaps = 2/280 (0%) Query: 17 DYVALTKPRVMSLVVFTALVGLMVAPGGIDPFIGFAALVCIAAGAGAAGALNMWYDADID 76 D+ L KPRVMSLV+FTALVG+ VAPGGI P I F AL+CIA GAGA+GALNMWYDADID Sbjct: 25 DFFELLKPRVMSLVIFTALVGIAVAPGGIHPVIAFTALLCIAVGAGASGALNMWYDADID 84 Query: 77 AMMARTAIRPIPSGRVSRPEALVFGLMLGTCAVLALGTLLNMAAAALLAFTIFFYVVVYT 136 A MARTA RPIP+GRV+ EA VFG +L AV+ +G L+N AAALLAFTIFFY+VVYT Sbjct: 85 ARMARTANRPIPAGRVTAREAAVFGSILSVFAVMTMGVLVNWVAAALLAFTIFFYLVVYT 144 Query: 137 MWLKRRTPQNIVIGGAAGALPPVIGWVAVTGHIGLEPLILFLIIFLWTPPHFWALSLNLA 196 MWLKRRTPQNIVIGGAAGA PP+IGW AVTG + +EP +LFLIIF+WTPPHFWAL+L + Sbjct: 145 MWLKRRTPQNIVIGGAAGAFPPMIGWAAVTGSVSIEPFVLFLIIFMWTPPHFWALALYRS 204 Query: 197 GEYARAGVPMLPVVAGKAETKRQILLYSALLVSTSLLPCALGFAGAVYGAAAVTLGAIMI 256 G+Y + GVPMLPVV+G+ ET+RQI+LYS LV +LLP LGFAGA+Y A LGA + Sbjct: 205 GDYEKVGVPMLPVVSGEKETRRQIMLYSLALVPVTLLPGFLGFAGALYMGATAALGAGFL 264 Query: 257 FLAWQVRRSHD--KERRPARRLFVFSMLYLVLLFGALLMN 294 +LA+ + R+ + + A+RLF +S+LYL L+F LL+ Sbjct: 265 WLAFGIWRTEPGAAQDKAAKRLFGYSILYLFLIFSLLLVE 304 >ref|YP_003692538.1| protoheme IX farnesyltransferase [Starkeya novella DSM 506] gb|ADH87919.1| protoheme IX farnesyltransferase [Starkeya novella DSM 506] Length = 311 Score = 341 bits (874), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 176/273 (64%), Positives = 212/273 (77%), Gaps = 2/273 (0%) Query: 11 SYANIGDYVALTKPRVMSLVVFTALVGLMVAPGGIDPFIGFAALVCIAAGAGAAGALNMW 70 S A++ DYVAL KPRVMSLV+FTALVG++ APG + P I F AL+CIA GAGA+GALNMW Sbjct: 17 SQASVSDYVALLKPRVMSLVIFTALVGIVRAPGEVHPVIAFTALLCIAIGAGASGALNMW 76 Query: 71 YDADIDAMMARTAIRPIPSGRVSRPEALVFGLMLGTCAVLALGTLLNMAAAALLAFTIFF 130 +DADIDA+M+RT RPIP+GRV+ EAL FG+ L +VL LG L+N +AALLAFTIFF Sbjct: 77 WDADIDAVMSRTKRRPIPAGRVTPGEALAFGMTLAVGSVLVLGLLVNELSAALLAFTIFF 136 Query: 131 YVVVYTMWLKRRTPQNIVIGGAAGALPPVIGWVAVTGHIGLEPLILFLIIFLWTPPHFWA 190 YVV+YTMWLKR TPQNIVIGGAAGA PP++GW A +G IGLE ++LFLIIF WTPPHFWA Sbjct: 137 YVVIYTMWLKRWTPQNIVIGGAAGAFPPMVGWAAASGGIGLESVLLFLIIFFWTPPHFWA 196 Query: 191 LSLNLAGEYARAGVPMLPVVAGKAETKRQILLYSALLVSTSLLPCALGFAGAVYGAAAVT 250 L+L +G+Y RAGVPMLPVVAG AET+RQILLY+ +LV ++ P LG AG YG + Sbjct: 197 LALYKSGDYERAGVPMLPVVAGTAETRRQILLYTLILVPLAMSPFFLGMAGIGYGLVSGI 256 Query: 251 LGAIMIFLAWQV--RRSHDKERRPARRLFVFSM 281 GA M+ LA QV RR + A+RLF FS+ Sbjct: 257 TGAFMLLLAVQVYRRREGAPAEQAAKRLFAFSI 289 >ref|ZP_02186258.1| putative protoheme IX farnesyltransferase (heme o synthase) [alpha proteobacterium BAL199] gb|EDP66495.1| putative protoheme IX farnesyltransferase (heme o synthase) [alpha proteobacterium BAL199] Length = 312 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 174/283 (61%), Positives = 217/283 (76%) Query: 13 ANIGDYVALTKPRVMSLVVFTALVGLMVAPGGIDPFIGFAALVCIAAGAGAAGALNMWYD 72 A++ DYVAL KPRVMSLVVFT VGL VAPG ++P + A++CIA GAGA+GA+NMWYD Sbjct: 23 ASVVDYVALLKPRVMSLVVFTGAVGLAVAPGHLNPVLAVIAVLCIAIGAGASGAINMWYD 82 Query: 73 ADIDAMMARTAIRPIPSGRVSRPEALVFGLMLGTCAVLALGTLLNMAAAALLAFTIFFYV 132 DIDA+M RT RPIP+GR++ EAL FG++L +VL +G +N AAA LLA TI FYV Sbjct: 83 RDIDAVMERTKTRPIPAGRMNPDEALAFGVVLAGFSVLVMGLAVNWAAAVLLAVTIGFYV 142 Query: 133 VVYTMWLKRRTPQNIVIGGAAGALPPVIGWVAVTGHIGLEPLILFLIIFLWTPPHFWALS 192 +YTMWLKRRTPQNIVIGGAAGA PP+IGW AVTG + + ++LF IIF+WTPPHFWAL+ Sbjct: 143 FIYTMWLKRRTPQNIVIGGAAGAFPPMIGWAAVTGDVSVASIVLFAIIFMWTPPHFWALA 202 Query: 193 LNLAGEYARAGVPMLPVVAGKAETKRQILLYSALLVSTSLLPCALGFAGAVYGAAAVTLG 252 L G+YARAGVPMLPVVAG ET+RQIL+Y+ LL + P LGFAG YG AA LG Sbjct: 203 LWRCGDYARAGVPMLPVVAGDRETRRQILIYAVLLAPLGVAPWFLGFAGLGYGMAATVLG 262 Query: 253 AIMIFLAWQVRRSHDKERRPARRLFVFSMLYLVLLFGALLMNA 295 A+ + A +V R D + RPA++LF +S+LYL L+GALL+++ Sbjct: 263 ALFVVAAVRVWRGSDADHRPAKQLFGYSILYLFALYGALLIDS 305 >ref|NP_107797.1| protoheme IX farnesyltransferase [Mesorhizobium loti MAFF303099] sp|Q985X0.1|COXX2_RHILO RecName: Full=Protoheme IX farnesyltransferase 2; AltName: Full=Heme B farnesyltransferase 2; AltName: Full=Heme O synthase 2 dbj|BAB53583.1| heme O synthase [Mesorhizobium loti MAFF303099] Length = 314 Score = 339 bits (869), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 173/296 (58%), Positives = 216/296 (72%), Gaps = 2/296 (0%) Query: 2 QINRSIRRRSYANIGDYVALTKPRVMSLVVFTALVGLMVAPGGIDPFIGFAALVCIAAGA 61 I+ + R S A GD+ AL KPRVMSLVVFTA VGL+ AP I+P + A++ IA GA Sbjct: 8 SIDEAGFRMSEATAGDFFALLKPRVMSLVVFTAFVGLVAAPVTINPLLAVIAILSIAIGA 67 Query: 62 GAAGALNMWYDADIDAMMARTAIRPIPSGRVSRPEALVFGLMLGTCAVLALGTLLNMAAA 121 GA+GALNMWYDADIDA+M RTA RP+PSGR+ EAL FGL+L +V+ LG L+N +A Sbjct: 68 GASGALNMWYDADIDAVMTRTASRPVPSGRIQPHEALSFGLVLSVLSVMTLGVLVNWLSA 127 Query: 122 ALLAFTIFFYVVVYTMWLKRRTPQNIVIGGAAGALPPVIGWVAVTGHIGLEPLILFLIIF 181 LLAFTIFFY VVYTMWLKR TPQNIVIGGAAGA+PPVIGW AVTG + LE ++LFLIIF Sbjct: 128 TLLAFTIFFYAVVYTMWLKRWTPQNIVIGGAAGAIPPVIGWAAVTGSVSLESIVLFLIIF 187 Query: 182 LWTPPHFWALSLNLAGEYARAGVPMLPVVAGKAETKRQILLYSALLVSTSLLPCALGFAG 241 LWTPPHFWAL+L +G+Y RAG+PM+P VAG A T+RQI Y+ +L + P LG+ Sbjct: 188 LWTPPHFWALALFKSGDYERAGIPMMPNVAGHASTRRQIFAYALVLAPVGVAPWLLGYTT 247 Query: 242 AVYGAAAVTLGAIMIFLAWQVRRSHDKER--RPARRLFVFSMLYLVLLFGALLMNA 295 YG AA+ LG ++ AW+V D +R +PA+ LF +S+LYL +F A L ++ Sbjct: 248 PFYGVAAMLLGLGFVWYAWKVLGMADDDRAMKPAKALFAYSLLYLFAIFAAYLADS 303 >ref|YP_004305122.1| Protoheme IX farnesyltransferase 2 [Polymorphum gilvum SL003B-26A1] gb|ADZ71818.1| Protoheme IX farnesyltransferase 2 [Polymorphum gilvum SL003B-26A1] Length = 312 Score = 338 bits (868), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 171/270 (63%), Positives = 209/270 (77%), Gaps = 2/270 (0%) Query: 14 NIGDYVALTKPRVMSLVVFTALVGLMVAPGGIDPFIGFAALVCIAAGAGAAGALNMWYDA 73 ++GDYVAL KPRVMSLV+FTA VG+M+APG + P + AL+CIA GAGA+GALNMWYDA Sbjct: 23 SVGDYVALLKPRVMSLVIFTAFVGMMLAPGVLHPVLAAVALLCIAIGAGASGALNMWYDA 82 Query: 74 DIDAMMARTAIRPIPSGRVSRPEALVFGLMLGTCAVLALGTLLNMAAAALLAFTIFFYVV 133 DID +M+RTA RPIP+G++SR E FG+ L +V+ LG L+N A A LAFTIFFYVV Sbjct: 83 DIDRVMSRTAKRPIPAGKISRQECFAFGMTLSIGSVVTLGLLVNWFAGAFLAFTIFFYVV 142 Query: 134 VYTMWLKRRTPQNIVIGGAAGALPPVIGWVAVTGHIGLEPLILFLIIFLWTPPHFWALSL 193 VYTMWLKR TPQNIVIGGAAGA PP+IGW AVTG + LE L+LFLIIF+WTPPHFWAL+L Sbjct: 143 VYTMWLKRSTPQNIVIGGAAGAFPPMIGWAAVTGDVSLESLVLFLIIFMWTPPHFWALAL 202 Query: 194 NLAGEYARAGVPMLPVVAGKAETKRQILLYSALLVSTSLLPCALGFAGAVYGAAAVTLGA 253 +G+Y AG+PMLPVVAG+ T+ QIL YS +L ++ P LGFAG +YG A+ LGA Sbjct: 203 FKSGDYRAAGIPMLPVVAGEDATRNQILAYSLILTPIAVSPYLLGFAGPLYGIASTVLGA 262 Query: 254 IMIFLAWQV--RRSHDKERRPARRLFVFSM 281 + LA +V RRS D+ R+ A RLF FS+ Sbjct: 263 VFFALALRVWRRRSGDEARKAAVRLFSFSI 292