BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0129.p (288 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241136.1| ABC transporter permease [Bradyrhizobium sp.... 358 4e-97 ref|ZP_03263865.1| inner-membrane translocator [Burkholderia sp.... 282 4e-74 ref|YP_002539788.1| ABC transporter membrane spanning protein (b... 244 8e-63 ref|ZP_02165037.1| putative permease component of ABC transporte... 235 5e-60 ref|ZP_05053006.1| amino acid or sugar ABC transport system, per... 229 4e-58 >ref|YP_001241136.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ37230.1| amino acid/amide ABC transporter membrane protein 1, HAAT family [Bradyrhizobium sp. BTAi1] Length = 288 Score = 358 bits (920), Expect = 4e-97, Method: Compositional matrix adjust. Identities = 198/287 (68%), Positives = 239/287 (83%) Query: 1 MIWVETLINGALLGGLYGLLGIGLALVFGVMRVVNIAHGEFMVLSAFCAVLLANLFPQVS 60 M W+ET++NG LLGGLYGL+GIGLALVFGVMRVV+ A GEFMV++AF AV++ P + Sbjct: 1 MAWIETVVNGLLLGGLYGLIGIGLALVFGVMRVVDGAQGEFMVMAAFFAVIVLAAAPDLH 60 Query: 61 PLLMLIPVIALSFAVGWLYQAAIVNRVVTSPDPLSPLLLTFGVSVILRNVMVEMFGADVR 120 PL++ I SF VG++YQ+ IVNR + S DPL+PLLLTFGVS+ILR+VMVE+FGAD+R Sbjct: 61 PLIIFGLAILFSFCVGYVYQSWIVNRSMQSSDPLAPLLLTFGVSIILRSVMVEVFGADLR 120 Query: 121 SLQVGELSRASLEIAGLNIGIMPLLTLVLAALLFMALQLVLRHTEFGRIVRATADRRDIV 180 LQ+G LSRAS+ I +NIG+MPLLTL + LF+ LQ +L+ T FGRI+RATADRRDIV Sbjct: 121 GLQLGSLSRASIAIFNINIGVMPLLTLATSIALFLLLQWMLKRTSFGRIIRATADRRDIV 180 Query: 181 RLSGVKPDRVYNYVMGLSLALGAIGGVLLAVRSSFTPFSGAERLLIAFEVVVLGGLGSFW 240 RL GVKPDRVY VM +S+AL AI G+ LA R+SFTPFSG ERLLIAFEVVVLGG+GSFW Sbjct: 181 RLFGVKPDRVYACVMAMSVALSAIAGLFLAARASFTPFSGVERLLIAFEVVVLGGIGSFW 240 Query: 241 GALLGGIALGMAQLIGLKIDPNAGLLYAHLLFFIMLLIRPSGLVSSR 287 G L+GG+ALG+ QL+GLK DPNAGLLY HLLFFIM+LIRPSGLV+SR Sbjct: 241 GPLIGGLALGVTQLVGLKWDPNAGLLYCHLLFFIMILIRPSGLVASR 287 >ref|ZP_03263865.1| inner-membrane translocator [Burkholderia sp. H160] gb|EEA04609.1| inner-membrane translocator [Burkholderia sp. H160] Length = 288 Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust. Identities = 145/263 (55%), Positives = 206/263 (78%) Query: 25 ALVFGVMRVVNIAHGEFMVLSAFCAVLLANLFPQVSPLLMLIPVIALSFAVGWLYQAAIV 84 A+VFGVMRV+N+AHGEF+V +AF A+L+ +L P + PL+ ++PV ++FAVG+L+Q ++ Sbjct: 25 AVVFGVMRVINVAHGEFIVGAAFVALLVTSLAPGMDPLIAIVPVAVIAFAVGYLFQTTLL 84 Query: 85 NRVVTSPDPLSPLLLTFGVSVILRNVMVEMFGADVRSLQVGELSRASLEIAGLNIGIMPL 144 N+VV D L P+L+TFGVS+++RN+M+ FG++ +L+ G L++ S +AG++IG++PL Sbjct: 85 NKVVRGGDMLPPMLITFGVSIVIRNLMLAGFGSNPMALRTGPLAQDSFSVAGIHIGLLPL 144 Query: 145 LTLVLAALLFMALQLVLRHTEFGRIVRATADRRDIVRLSGVKPDRVYNYVMGLSLALGAI 204 +TL ++ LLF ALQ VL T FGR+VRATAD DIVRL GV P R+Y VMG+S + ++ Sbjct: 145 ITLAISILLFSALQYVLVRTAFGRMVRATADNPDIVRLMGVNPTRIYGLVMGISFVMASV 204 Query: 205 GGVLLAVRSSFTPFSGAERLLIAFEVVVLGGLGSFWGALLGGIALGMAQLIGLKIDPNAG 264 GVLLA+R+SF+ SG +R+LIAFEVVVLGGLGS WGALL GI LG+ QL+ + D N+G Sbjct: 205 AGVLLAMRTSFSAASGVDRILIAFEVVVLGGLGSIWGALLAGILLGVVQLMSFQFDANSG 264 Query: 265 LLYAHLLFFIMLLIRPSGLVSSR 287 LLYAHLLF + LL+RP+GL+ ++ Sbjct: 265 LLYAHLLFLVFLLVRPNGLLGAK 287 >ref|YP_002539788.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] gb|ACM40083.1| ABC transporter membrane spanning protein (branched chain amino acid) [Agrobacterium vitis S4] Length = 287 Score = 244 bits (624), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 131/283 (46%), Positives = 190/283 (67%), Gaps = 2/283 (0%) Query: 1 MIWVETLINGALLGGLYGLLGIGLALVFGVMRVVNIAHGEFMVLSAFCAVLLANLFPQVS 60 M W++T++ GALLGGLY L GL+LVFG+MR+VN+AHG+ +VL++F ++LAN F ++ Sbjct: 1 MNWLDTILQGALLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLASFLILMLANTF-GIN 59 Query: 61 PLLMLIPVIALSFAVGWLYQAAIVNRVVTSPDPLSPLLLTFGVSVILRNVMVEMFGADVR 120 P L + I L F +GWL Q ++NR + D L PLL+TFG+S++++N ++E F AD R Sbjct: 60 PFLAALIAIPLMFGLGWLLQTYLLNRTL-GKDILPPLLVTFGLSIVIQNGLLEGFTADSR 118 Query: 121 SLQVGELSRASLEIAGLNIGIMPLLTLVLAALLFMALQLVLRHTEFGRIVRATADRRDIV 180 L G L ASL +AGLNIGIMPLLT A ++ +AL ++ T GR RAT+D Sbjct: 119 RLSTGVLETASLPLAGLNIGIMPLLTFGSAIIVIIALNQLIYRTSLGRAFRATSDDPVTA 178 Query: 181 RLSGVKPDRVYNYVMGLSLALGAIGGVLLAVRSSFTPFSGAERLLIAFEVVVLGGLGSFW 240 + GV+P R++ GL++ + I + L+ R++F P +G RL+ AFE V++GGLGS W Sbjct: 179 GMMGVRPHRIFAMATGLAMVVVTIAALYLSTRANFDPTAGPSRLIYAFEAVIIGGLGSLW 238 Query: 241 GALLGGIALGMAQLIGLKIDPNAGLLYAHLLFFIMLLIRPSGL 283 G L GG+ LG+AQ +G I+P +L H+ F I+LL+RP GL Sbjct: 239 GTLAGGVVLGIAQTLGAAINPEWQILAGHIAFLIVLLVRPRGL 281 >ref|ZP_02165037.1| putative permease component of ABC transporter [Hoeflea phototrophica DFL-43] gb|EDQ35732.1| putative permease component of ABC transporter [Hoeflea phototrophica DFL-43] Length = 287 Score = 235 bits (600), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 130/288 (45%), Positives = 185/288 (64%), Gaps = 2/288 (0%) Query: 1 MIWVETLINGALLGGLYGLLGIGLALVFGVMRVVNIAHGEFMVLSAFCAVLLANLFPQVS 60 MIWVET+I G LLGGLY L GL+LVFG+MR+VN+AHG+ +VL A+ +LL L +S Sbjct: 1 MIWVETIIQGILLGGLYALFAAGLSLVFGIMRLVNLAHGDLIVLGAYLILLLVTL-TGLS 59 Query: 61 PLLMLIPVIALSFAVGWLYQAAIVNRVVTSPDPLSPLLLTFGVSVILRNVMVEMFGADVR 120 P + + FA+G+ Q ++NRV+ D L PLL+TFG+SV+L+N ++E F AD + Sbjct: 60 PFVAAAVAMPFMFALGYGLQKFMLNRVLGD-DILPPLLVTFGLSVVLQNALLEGFSADSQ 118 Query: 121 SLQVGELSRASLEIAGLNIGIMPLLTLVLAALLFMALQLVLRHTEFGRIVRATADRRDIV 180 +Q G LS AS+E+AGLN+G+MPLLT A + + L + T GR RAT+D Sbjct: 119 RIQSGPLSTASIEVAGLNLGVMPLLTFASALAVIIGLNQLFYRTSLGRAFRATSDDPTTA 178 Query: 181 RLSGVKPDRVYNYVMGLSLALGAIGGVLLAVRSSFTPFSGAERLLIAFEVVVLGGLGSFW 240 L G+KP ++ G+++ + I + L +RS+F P G RL+ AFE V++GGLGS W Sbjct: 179 SLMGIKPAGIFAKATGIAMIIVTIAALYLGMRSNFDPSIGPARLIYAFEAVIIGGLGSLW 238 Query: 241 GALLGGIALGMAQLIGLKIDPNAGLLYAHLLFFIMLLIRPSGLVSSRV 288 G L GG+ +G+AQ +G I+P +L H+ F I+LL+RP GL V Sbjct: 239 GTLAGGVIIGVAQTVGAAINPEWQILAGHMAFLIVLLVRPRGLFPRAV 286 >ref|ZP_05053006.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] gb|EDY79272.1| amino acid or sugar ABC transport system, permease protein, putative [Octadecabacter antarcticus 307] Length = 288 Score = 229 bits (584), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 126/284 (44%), Positives = 188/284 (66%), Gaps = 3/284 (1%) Query: 1 MIWVETLINGALLGGLYGLLGIGLALVFGVMRVVNIAHGEFMVLSAFCAVLLANLFPQVS 60 M V+ L+ G LLGG+Y L +GL+L+FG+MR+VNIAHG+ +VL+ F + + + + Sbjct: 1 MEIVQILVQGILLGGVYTLFAVGLSLMFGIMRLVNIAHGDLIVLAGFFSYSIIQM-TGLG 59 Query: 61 PLLMLIPVIALSFAVGWLYQAAIVNRVVTSPDPLSPLLLTFGVSVILRNVMVEMFGADVR 120 PL+ L+ V+ FA G++ QA I+NR + D L P+++TFG+++I++N ++E + AD R Sbjct: 60 PLVSLVIVVPAFFAFGYVLQAGILNRTL-GDDLLPPMIVTFGLAIIIQNALLEGYSADSR 118 Query: 121 SLQVGELSRASLEIA-GLNIGIMPLLTLVLAALLFMALQLVLRHTEFGRIVRATADRRDI 179 L +GE+ AS ++ GL +G+ PL+ L +A +ALQ + T GR RAT+D Sbjct: 119 KLSLGEVETASFALSEGLAVGVFPLIILAVAVGTIVALQTLFYRTRLGREFRATSDDPAA 178 Query: 180 VRLSGVKPDRVYNYVMGLSLALGAIGGVLLAVRSSFTPFSGAERLLIAFEVVVLGGLGSF 239 ++ G+ R++ G++L + I GVL+AVR++F P SG RLL AFE V++GGLGS Sbjct: 179 AQMMGIDTKRIFAISTGIALVVIGIAGVLMAVRTTFEPLSGPTRLLFAFEAVIIGGLGSI 238 Query: 240 WGALLGGIALGMAQLIGLKIDPNAGLLYAHLLFFIMLLIRPSGL 283 WG L GGIALG+AQ IG IDP +L HLLF ++L+IRP GL Sbjct: 239 WGTLFGGIALGLAQAIGGAIDPQFQILAGHLLFLLVLVIRPQGL 282