BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0126.p (437 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241139.1| ABC transporter substrate-binding protein [B... 717 0.0 ref|YP_002539519.1| ABC transporter substrate-binding protein [A... 465 e-129 ref|YP_164931.1| branched-chain amino acid ABC transporter, peri... 453 e-125 ref|ZP_03263868.1| putative ABC transporter, substrate-binding p... 445 e-123 ref|NP_773047.1| ABC transporter substrate-binding protein [Brad... 370 e-100 >ref|YP_001241139.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37233.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 420 Score = 717 bits (1851), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/419 (80%), Positives = 377/419 (89%) Query: 18 LLKAAGATGLASAMNVPLVNIARAAGNTLKIGWVGCLSGVRAQFAEPDPWIHERIKARLK 77 +LKAAGA GLA + +V NIA AA +T+KIGWVGCLSG+RA FAEPDPWI ER+K LK Sbjct: 1 MLKAAGALGLAGSGSVTFANIANAASSTIKIGWVGCLSGIRAPFAEPDPWIQERMKTHLK 60 Query: 78 DGLKIGGKTYQVELVFKDNQSDPNRSSVIASELVLREKCDLILIEDGDAQPPVQELADAR 137 DGLKIGGKTY VELV +DNQS+PNRS+ +ASELVLREKCDLIL++DGDAQ PV ELADAR Sbjct: 61 DGLKIGGKTYNVELVIRDNQSEPNRSATVASELVLREKCDLILVQDGDAQIPVGELADAR 120 Query: 138 GIPTISTMVPWQGWMFPRKSTPDKGFPYSYHFFWGADDVAKNFLGMWQSVETNKKVGTLY 197 G+P ISTM+PWQ WMFPRKSTPDKGFPY++HFFWGADDV KNF+GMWQSVETNKKVGTLY Sbjct: 121 GVPAISTMLPWQAWMFPRKSTPDKGFPYTFHFFWGADDVVKNFIGMWQSVETNKKVGTLY 180 Query: 198 IDNPPGQAFSDPKLGLPAGISAAGYQEFSAGKFQIATDDFTNQIALFKNNGVDIVSGFTF 257 IDN PG AF+DP GLPAG++ AGY+E AG +++ TDDF+NQI+ KN GVDIVSGF + Sbjct: 181 IDNSPGVAFADPSEGLPAGLAQAGYREVPAGLYKLTTDDFSNQISALKNEGVDIVSGFAY 240 Query: 258 SNHWVTLWNQAAQAGFKPQICTVAAAFLFPAAVNALGDRGDGMSTEVWWTPAYPFKSSLT 317 HWVTLWNQAAQAGFKPQICT+AAAFLFP+AVNALGDRGDGMSTEVWWTPAYPFKSSLT Sbjct: 241 GPHWVTLWNQAAQAGFKPQICTIAAAFLFPSAVNALGDRGDGMSTEVWWTPAYPFKSSLT 300 Query: 318 GQSAGELAAEWEKTTGKQWTQPIGYAHALWEVGLAALQNSDPKDKNSLRDAIAGLDMETV 377 GQSA ELAA+WEKTTG+QWTQPIGYAHALWEVG+AAL+NSDPKDK SLRDAIAGLD++TV Sbjct: 301 GQSAAELAADWEKTTGRQWTQPIGYAHALWEVGIAALRNSDPKDKKSLRDAIAGLDLQTV 360 Query: 378 VGRVKFKDSPIRNVAVTSLSGGQWRKAKGGKSKYELLIVHNGTAPFIPKQADLQLLSKL 436 VG V FKDSPI+NVAVTSL+GGQWRKAK GK+ YELLIVHNGTAPFIPKQ+DL LLSKL Sbjct: 361 VGPVNFKDSPIKNVAVTSLAGGQWRKAKTGKAPYELLIVHNGTAPFIPKQSDLTLLSKL 419 >ref|YP_002539519.1| ABC transporter substrate-binding protein [Agrobacterium vitis S4] gb|ACM39814.1| ABC transporter substrate-binding protein [Agrobacterium vitis S4] Length = 435 Score = 465 bits (1197), Expect = e-129, Method: Compositional matrix adjust. Identities = 216/431 (50%), Positives = 304/431 (70%), Gaps = 4/431 (0%) Query: 4 TKNNTASGRLNRRTLLKAAGATGLASAMNVPLVNIARAAGNTLKIGWVGCLSGVRAQFAE 63 T + S ++RRT++K AGA L + M+ ++ RA+ +KIG++GCLSG+RA+F+ Sbjct: 5 TSADRLSRTISRRTIVKGAGALALGTLMSP---HVVRASSGKIKIGYIGCLSGLRAEFSV 61 Query: 64 PDPWIHERIKARLKDGLKIGGKTYQVELVFKDNQSDPNRSSVIASELVLREKCDLILIED 123 D W ++KA + GL +GGKTY+VE V +DNQSD NRS+ +ASELVLRE+C+L+L+ D Sbjct: 62 ADLWTINQMKALVAKGLDVGGKTYEVEFVIRDNQSDVNRSASVASELVLRERCNLVLVAD 121 Query: 124 GDAQPPVQELADARGIPTISTMVPWQGWMFPRKSTPDKGFPYSYHFFWGADDVAKNFLGM 183 GD + ELAD R +P ISTM+PW+G R STP+KGFPY++HFF + + +N++GM Sbjct: 122 GDGALAIGELADTRRVPVISTMMPWEGLYAARGSTPEKGFPYTFHFFPSSASILQNYVGM 181 Query: 184 WQSVETNKKVGTLYIDNPPGQAFSDPKLGLPAGISAAGYQEFSAGKFQIATDDFTNQIAL 243 W + TN +VGT+Y+D+ G+A DP GLPA + AG E +AG FQ+ T DF+NQIA Sbjct: 182 WNAAGTNGRVGTIYLDHAVGRALMDPAHGLPAQMKQAGMTEVAAGAFQLGTTDFSNQIAR 241 Query: 244 FKNNGVDIVSGFTFSNHWVTLWNQAAQAGFKPQICTVAAAFLFPAAVNALGDRGDGMSTE 303 FK+ D+++G+ F H+VT WNQ QAG P++CT AAAF F + + ALG GDGM+T+ Sbjct: 242 FKDGNCDVLAGYMFQQHFVTFWNQVRQAGLTPKVCTFAAAFAFSSTMEALGKSGDGMTTD 301 Query: 304 VWWTPAYPFKSSLTGQSAGELAAEWEKTTGKQWTQPIGYAHALWEVGLAAL-QNSDPKDK 362 V+WTP+YP+KSSLTG A +LA +W+ +GKQW QP+GY HALWEVG AAL Q++DP+D Sbjct: 302 VFWTPSYPYKSSLTGIGARDLANQWQNESGKQWLQPLGYIHALWEVGFAALKQSTDPRDA 361 Query: 363 NSLRDAIAGLDMETVVGRVKFKDSPIRNVAVTSLSGGQWRKAKGGKSKYELLIVHNGTAP 422 N++R +IA LD+ET+ GRV FK + +++A ++ GQWR K ++L IV+N AP Sbjct: 362 NAVRTSIANLDIETMAGRVNFKTTTKKSIADMPMAAGQWRFDAAAKFPFDLDIVYNALAP 421 Query: 423 FIPKQADLQLL 433 IP A L+ L Sbjct: 422 EIPVTAHLRRL 432 >ref|YP_164931.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein, putative [Ruegeria pomeroyi DSS-3] gb|AAV97238.1| branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein, putative [Ruegeria pomeroyi DSS-3] Length = 426 Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust. Identities = 219/430 (50%), Positives = 288/430 (66%), Gaps = 6/430 (1%) Query: 8 TASGRLNRRTLLKAAGATGLASAMNVPLVNIARAAGNTLKIGWVGCLSGVRAQFAEPDPW 67 T + LNRR+ L AG+ + P +I AA L+IG++ LSG RA F D W Sbjct: 2 TRNQSLNRRSFL--AGSAAFIGTLAAP--SIVTAASKKLRIGFISPLSGPRASFGTSDQW 57 Query: 68 IHERIKARLKDGLKIGGKTYQVELVFKDNQSDPNRSSVIASELVLREKCDLILIEDGDAQ 127 + E I L GL GG +++VE++ KDNQS+ NRS + +EL+LR++ D++LI DGDA Sbjct: 58 MVETISKHLSGGLISGGASHEVEIIVKDNQSNMNRSISVGNELLLRDQVDMLLINDGDAA 117 Query: 128 PPVQELADARGIPTISTMVPWQGWMFPRKSTPDKGFPYSYHFFWGADDVAKNFLGMWQSV 187 + E+AD G+PT+STM PWQ WMFPR S P++GFP+++HFFWGADD F +W + Sbjct: 118 VALGEIADIHGVPTMSTMQPWQAWMFPRGSNPEQGFPWTFHFFWGADDAMSTFTRLWDQI 177 Query: 188 ETNKKVGTLYIDNPPGQAFSDPKLGLPAGISAAGYQEFSAGKFQIATDDFTNQIALFKNN 247 +TNK VG Y+DNP G AF+DP +GLP I GY G F+I DD++ Q++ FK Sbjct: 178 DTNKVVGDFYLDNPVGNAFADPAMGLPGFIERGGYSRVDGGMFKIDADDYSGQVSRFKEA 237 Query: 248 GVDIVSGFTFSNHWVTLWNQAAQAGFKPQICTVAAAFLFPAAVNALGDRGDGMSTEVWWT 307 G DIV+GF F HW+T WNQA QAG+ P+ CT AAAFLFP A+ A+GDRGDGM+TEVWWT Sbjct: 238 GADIVTGFGFPPHWITFWNQAGQAGYTPKACTFAAAFLFPQAIEAMGDRGDGMTTEVWWT 297 Query: 308 PAYPFKSSLTGQSAGELAAEWEKTTGKQWTQPIGYAHALWEVGLAAL-QNSDPKDKNSLR 366 P PF SSLTGQ+A ELA WE + QW Q +GY+HAL+E GL AL Q+ PKD+ ++R Sbjct: 298 PNVPFASSLTGQTARELADAWEAESNAQWVQTLGYSHALFETGLNALVQSGAPKDRAAVR 357 Query: 367 DAIAGLDMETVVGRVKFKDSPIRNVAVTSLSGGQWRKAKGGKSKYELLIVHNGTAPFIPK 426 D A ++TVVG V F DSPIRN A T L+GGQWRK+ GK +EL+I N AP I Sbjct: 358 DVFASTRLDTVVGPVNFADSPIRNTARTQLAGGQWRKSS-GKHAFELVITENTLAPDIGV 416 Query: 427 QADLQLLSKL 436 +++ L ++ Sbjct: 417 ESETIALPQV 426 >ref|ZP_03263868.1| putative ABC transporter, substrate-binding protein [Burkholderia sp. H160] gb|EEA04612.1| putative ABC transporter, substrate-binding protein [Burkholderia sp. H160] Length = 439 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 216/424 (50%), Positives = 291/424 (68%), Gaps = 2/424 (0%) Query: 13 LNRRTLLK-AAGATGLASAMNVPLVNIARAAGNTLKIGWVGCLSGVRAQFAEPDPWIHER 71 L+RR LK A T SA +P ++A + T+KIG+V LSG+RA F + + Sbjct: 14 LSRRDFLKTAVQLTAAVSATALPGFSVASSQNQTIKIGFVVPLSGIRASFGASTNFSIDF 73 Query: 72 IKARLKDGLKIGGKTYQVELVFKDNQSDPNRSSVIASELVLREKCDLILIEDGDAQPPVQ 131 ++ LKDG++I GK Y VE++ KDNQS P+RS + +EL+L +K D+IL+ D D + Sbjct: 74 VRKYLKDGIEIAGKKYAVEIIVKDNQSSPSRSLQVGNELILNDKPDIILVSDADGATAIA 133 Query: 132 ELADARGIPTISTMVPWQGWMFPRKSTPDKGFPYSYHFFWGADDVAKNFLGMWQSVETNK 191 LADARGIP +S PWQG++ R P KGFP+++HFFWGAD++ K + +W ++ TNK Sbjct: 134 NLADARGIPQVSCGGPWQGYVAQRHYDPQKGFPFTFHFFWGADELGKTYASLWDTLPTNK 193 Query: 192 KVGTLYIDNPPGQAFSDPKLGLPAGISAAGYQEFSAGKFQIATDDFTNQIALFKNNGVDI 251 KVGTLY DN G+A SD + G P AAGY+ G FQ TDDF+ QIA FK GV+I Sbjct: 194 KVGTLYADNDGGRAMSDAQHGFPPAFKAAGYEVIDTGLFQPNTDDFSTQIAKFKAAGVEI 253 Query: 252 VSGFTFSNHWVTLWNQAAQAGFKPQICTVAAAFLFPAAVNALGDRGDGMSTEVWWTPAYP 311 V+G F NH VT WNQA QAGFKP+ICT+AA LFP++VN LG G+GMSTEVWWTPA+P Sbjct: 254 VAGHAFENHLVTFWNQAMQAGFKPKICTIAAGLLFPSSVNNLGPHGNGMSTEVWWTPAFP 313 Query: 312 FKSSLTGQSAGELAAEWEKTTGKQWTQPIGYAHALWEVGLAALQNS-DPKDKNSLRDAIA 370 FKSSLTGQSA ++A + TG QWTQP+GY HAL EVG+AAL+ S +PK+ ++RDAIA Sbjct: 314 FKSSLTGQSAQQIADAYTAATGNQWTQPLGYDHALLEVGIAALKASGNPKNATAVRDAIA 373 Query: 371 GLDMETVVGRVKFKDSPIRNVAVTSLSGGQWRKAKGGKSKYELLIVHNGTAPFIPKQADL 430 + ++TVVG+V F SP++N+ VT + GQW++ GK K++L +V N + P +P L Sbjct: 374 RMTLDTVVGKVDFGHSPLKNIGVTHIVAGQWQQGVAGKFKFDLKVVGNSSNPAVPLSGKL 433 Query: 431 QLLS 434 + L+ Sbjct: 434 EPLA 437 >ref|NP_773047.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51672.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 520 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/394 (45%), Positives = 254/394 (64%), Gaps = 4/394 (1%) Query: 41 AAGNTLKIGWVGCLSGVRAQFAEPDPWIHERIKARLKDGLKIGGKTYQVELVFKDNQSDP 100 AA ++IG++ +G A FAE D +I ++++ L GL +GG Y+VE++ +D+QS P Sbjct: 128 AADKKIRIGYISPKTGPFAPFAEADDFILDQVRKSLAGGLSVGGSKYEVEIIARDDQSSP 187 Query: 101 NRSSVIASELVLREKCDLILIEDGDAQPPVQELADARGIPTISTMVPWQGWMFPRKSTPD 160 +R S +A+EL+ +E DL+L + P V + + G+P ISTM PWQ WMFP K P Sbjct: 188 DRQSNLAAELINKENIDLMLAQV-SIGPAVSQQCELNGVPCISTMGPWQAWMFPMKGDPA 246 Query: 161 KGFPYSYHFFWGADDVAKNFLGMWQSVETNKKVGTLYIDNPPGQAFSDPKLGLPAGISAA 220 KGF +HFFWG +D+A +L +W+ +TNK VG+++ ++ PG A D KLG+P + A Sbjct: 247 KGFKNVFHFFWGIEDIAAVYLDIWKDADTNKVVGSVFSNDVPGNAMGDAKLGMPGAFAKA 306 Query: 221 GYQEFSAGKFQIATDDFTNQIALFKNNGVDIVSGFTFSNHWVTLWNQAAQAGFKPQICTV 280 GY+ G+F + DDF+ I FK GV+IV+G W T NQ+AQ GFKP++CTV Sbjct: 307 GYKIVDVGRFPVGADDFSTHIQAFKKEGVEIVTGLFNPPEWATFLNQSAQMGFKPKVCTV 366 Query: 281 AAAFLFPAAVNALGDRGDGMSTEVWWTPAYPFKSSLTGQSAGELAAEWEKTTGKQWTQPI 340 A A LFP V ALG R +GMSTE+WW P+YPF+SSLTGQ+A ELAA +++ T ++WTQPI Sbjct: 367 AKALLFPGGVAALGPRAEGMSTEIWWLPSYPFRSSLTGQTAAELAASYQQATKREWTQPI 426 Query: 341 GYAHALWEVGLAALQNS-DPKDKNSLRDAIAGLDMETVVGRVKFKDSPIRNVAVTSLSGG 399 G AHAL+E G+ AL+ S DPK N + +++ L +TV+G + F S I NV+ + GG Sbjct: 427 GVAHALFEAGVQALKASGDPKSPNKVVESLRKLKTDTVIGNLDFGGSGIANVSKIRVVGG 486 Query: 400 QWRKAKGGKSKYELLIVHNGTAPFIPKQADLQLL 433 QW GGK L I N TAP I + L+LL Sbjct: 487 QWHVEDGGKP--HLYITSNSTAPEIKAERKLELL 518