BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0105.p (195 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_571414.1| hypothetical protein RPD_4296 [Rhodopseudomonas... 288 4e-76 ref|YP_003930707.1| hypothetical protein Pvag_1065 [Pantoea vaga... 94 7e-18 ref|YP_002984674.1| ANTAR domain protein with unknown sensor [Rh... 85 7e-15 ref|YP_771485.1| putative transcriptional regulator [Rhizobium l... 84 8e-15 ref|ZP_08734484.1| ANTAR domain protein with unknown sensor [Vib... 82 6e-14 >ref|YP_571414.1| hypothetical protein RPD_4296 [Rhodopseudomonas palustris BisB5] gb|ABE41513.1| ANTAR [Rhodopseudomonas palustris BisB5] Length = 194 Score = 288 bits (736), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 148/195 (75%), Positives = 166/195 (85%), Gaps = 1/195 (0%) Query: 1 MSKPSSFSLRGRKALVAIKDERDASIVRRQFERLGIEIVTWEPGANIDCRPDVTLIDDEF 60 MSKPSSFSLRGRKALVAIKDERD SIVRRQF+RLGIE+ +WEP A DV LIDD++ Sbjct: 1 MSKPSSFSLRGRKALVAIKDERDGSIVRRQFDRLGIEMASWEPSAAPGA-ADVILIDDDY 59 Query: 61 LPLASPAQRTSFGRSPVIALLGTETPSRLKLVLDLDPASFLVKPLRSAGIYAALVLAFER 120 LPLA+ R VI LLGTETPSRLKLVLDLDP+SFLVKPLRSAGIYAALV+AFER Sbjct: 60 LPLAAADARVFSEDCAVIVLLGTETPSRLKLVLDLDPSSFLVKPLRSAGIYAALVMAFER 119 Query: 121 GERTSELKQQVLKLEQRLRSRRVVLAAVLQVMHTHALAEPAAFALIRRAAMEQRKTIEEL 180 ERTSELKQQ++K++ RLRSRRVVL AVLQVM THALAEPAAFALIRR AM+QRKTIE++ Sbjct: 120 LERTSELKQQIVKMDARLRSRRVVLTAVLQVMQTHALAEPAAFALIRRTAMQQRKTIEQV 179 Query: 181 SAEITAKGSLPRATG 195 +AE+ A+G LPRA G Sbjct: 180 AAELVAQGYLPRAIG 194 >ref|YP_003930707.1| hypothetical protein Pvag_1065 [Pantoea vagans C9-1] gb|ADO09258.1| hypothetical protein Pvag_1065 [Pantoea vagans C9-1] Length = 202 Score = 94.4 bits (233), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 61/181 (33%), Positives = 93/181 (51%), Gaps = 2/181 (1%) Query: 6 SFSLRGRKALVAIKDERDASIVRRQFERLGIE--IVTWEPGANIDCRPDVTLIDDEFLPL 63 + +RG K V +RD + +QF R+GIE P N + + D + L Sbjct: 5 NVQMRGLKVCVIGCSDRDNHHLAQQFSRIGIEGLFCAVFPDENQLADQQLLVFDGDNSTL 64 Query: 64 ASPAQRTSFGRSPVIALLGTETPSRLKLVLDLDPASFLVKPLRSAGIYAALVLAFERGER 123 P + P IAL ETPSRL+ + + S++ KP+R G+ A LA + Sbjct: 65 FHPTNPLPWPALPKIALTAIETPSRLQWIAEQKIDSYMRKPVRFDGVMTAFTLALTHAAQ 124 Query: 124 TSELKQQVLKLEQRLRSRRVVLAAVLQVMHTHALAEPAAFALIRRAAMEQRKTIEELSAE 183 +L+ Q+ + E+RLR+RR + +A L+VM L E A++L+RRA+M Q TIE LS Sbjct: 125 IHQLEAQLRRQEERLRARRFLFSAQLRVMSALRLEEDDAYSLLRRASMAQHMTIENLSCA 184 Query: 184 I 184 + Sbjct: 185 L 185 >ref|YP_002984674.1| ANTAR domain protein with unknown sensor [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS59712.1| ANTAR domain protein with unknown sensor [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 193 Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 17/195 (8%) Query: 8 SLRGRKALVAIKDERDASIVRRQFERLGIEI-VTWEPGANIDCRPDVTLID-----DEFL 61 + G +A+V +++ + + RQ LGI + W P + PD+ ++D D+ L Sbjct: 6 NFTGWQAMVLHREDGNTERLIRQLRLLGIHAALQWAP-LSTAALPDLVIVDADQGWDDLL 64 Query: 62 PLA--SPAQRTSFGRSPVIALLGTETPSRLKLVLDLDPASFLVKPLRSAGIYAALVLAFE 119 P +PA PV+ALLG+E P R+ L + + KP+ ++ +Y ALV+A Sbjct: 65 PWNGETPA-------CPVVALLGSEAPGRIAWALGQGAGAIIAKPIATSAVYPALVMAVS 117 Query: 120 RGERTSELKQQVLKLEQRLRSRRVVLAAVLQVMHTHALAEPAAFALIRRAAMEQRKTIEE 179 + +++ LE+R+R R +V AAV ++ H + E +A+A++R AM +R +E+ Sbjct: 118 IHQERKATAEKLKYLEERVRLRPLVHAAVEKLQAAHGIDEESAYAILRNCAMRRRLPMEQ 177 Query: 180 LSAEITAKGS-LPRA 193 +SA I A LP A Sbjct: 178 ISAFILAGAEPLPEA 192 >ref|YP_771485.1| putative transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841] emb|CAK03404.1| putative transcriptional regulator [Rhizobium leguminosarum bv. viciae 3841] Length = 193 Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 60/195 (30%), Positives = 103/195 (52%), Gaps = 17/195 (8%) Query: 8 SLRGRKALVAIKDERDASIVRRQFERLGIE-IVTWEPGANIDCRPDVTLID-----DEFL 61 + G +A+V +++ + + RQ LGI + W P + PD+ ++D D+ L Sbjct: 6 NFTGWQAMVLHREDGNTEKLIRQLRLLGIHATLQWAP-LSAAALPDLVIVDADQGWDDLL 64 Query: 62 PLA--SPAQRTSFGRSPVIALLGTETPSRLKLVLDLDPASFLVKPLRSAGIYAALVLAFE 119 P +PA PV+ALLG+E P R+ L + + KP+ ++ +Y ALV+A Sbjct: 65 PWNGETPA-------CPVVALLGSEAPGRIAWALGQGAGAIIAKPIATSAVYPALVMAVS 117 Query: 120 RGERTSELKQQVLKLEQRLRSRRVVLAAVLQVMHTHALAEPAAFALIRRAAMEQRKTIEE 179 + +++ LE+R+R R +V AAV ++ H + E +A+A++R AM +R +E+ Sbjct: 118 IHQERKATAEKLKYLEERVRLRPLVHAAVEKLQVAHGIDEESAYAILRNCAMRRRLPMEQ 177 Query: 180 LSAEITAKGS-LPRA 193 +SA I A LP A Sbjct: 178 ISAFILAGAEPLPEA 192 >ref|ZP_08734484.1| ANTAR domain protein with unknown sensor [Vibrio nigripulchritudo ATCC 27043] gb|EGU56130.1| ANTAR domain protein with unknown sensor [Vibrio nigripulchritudo ATCC 27043] Length = 193 Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 49/178 (27%), Positives = 94/178 (52%), Gaps = 2/178 (1%) Query: 8 SLRGRKALVAIKDERDASIVRRQFERLGIEIVTWEPGANIDCRPDVTLIDDEFLPLASPA 67 SL K V +DER +R+ ER+GIE + N + D+ LID + Sbjct: 5 SLSIDKITVVSRDERTCGQIRKAAERMGIECHITDSVDNT--KTDLLLIDVQHYFSDMHT 62 Query: 68 QRTSFGRSPVIALLGTETPSRLKLVLDLDPASFLVKPLRSAGIYAALVLAFERGERTSEL 127 Q+ P++ L+ +P+ ++ + + S + KP+ G+YAA +A + ++ +++ Sbjct: 63 QKAIPQALPIVGLIAHGSPTEIERAIAMGAMSVVGKPIHQTGLYAAFHMALKLSQQQAKM 122 Query: 128 KQQVLKLEQRLRSRRVVLAAVLQVMHTHALAEPAAFALIRRAAMEQRKTIEELSAEIT 185 Q++ L+ R + R VV+ AV+ VM H ++E A+ L+R +M++ +E++ E+T Sbjct: 123 HQELESLKMRHKLRPVVIQAVIGVMDKHQISESQAYELLRSYSMQRNVPVEQVCIELT 180