BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0103.p (270 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_841941.1| nitric oxide reductase NorQ protein [Nitrosomon... 393 e-107 ref|YP_115145.1| cbbQ protein [Methylococcus capsulatus str. Bat... 393 e-107 ref|YP_003695076.1| ATPase [Starkeya novella DSM 506] >gi|296929... 392 e-107 gb|ADI18224.1| moxr-like ATPases [uncultured gamma proteobacteri... 392 e-107 gb|AAL40973.1|AF447860_2 CbbQ [Methylococcus capsulatus] 390 e-107 >ref|NP_841941.1| nitric oxide reductase NorQ protein [Nitrosomonas europaea ATCC 19718] emb|CAD85830.1| nitric oxide reductase NorQ protein [Nitrosomonas europaea ATCC 19718] Length = 267 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 181/256 (70%), Positives = 216/256 (84%) Query: 7 LLDQYRIREEPYYRPLKDEVELFGAAYANRMPVMLKGPTGCGKTRFIEYMAWRLGRPLIT 66 +++QY ++ EPYYRP+ DEV+L+ AAY+ RMP+MLKGPTGCGKTRF+EYMAW+LG+PLIT Sbjct: 4 VIEQYFVKNEPYYRPVADEVKLYEAAYSVRMPMMLKGPTGCGKTRFVEYMAWKLGKPLIT 63 Query: 67 VACHEDMTAADLVGRWLLDAEGTVWSDGPLTTAVRLGAICYLDEIVEARQDTTVVIHPLT 126 VAC+EDMTA+DLVGR+LLDA+GT W DGPLTTA R GAICYLDE+VEARQDTTVVIHPLT Sbjct: 64 VACNEDMTASDLVGRFLLDAQGTRWQDGPLTTAARYGAICYLDEVVEARQDTTVVIHPLT 123 Query: 127 DDRRVLPLEKRGELIHAHSDFQLVISYNPGYQSAIKDLKESTKQRFAALDFGYPDRPVET 186 D+RRVLPLEK+GEL+ AH DFQLVISYNPGYQS +KDLK+STKQRF ALDF YP +ET Sbjct: 124 DNRRVLPLEKKGELVGAHPDFQLVISYNPGYQSLMKDLKQSTKQRFGALDFNYPQHDIET 183 Query: 187 EVVSREAGIEPNLADLLVKIAQHSRNLKGQGLDEGASTRMLVNAGRLIGCGISLEKACET 246 E+VS E GI+ +AD LV IA+ +RNLKG GLDEG STRML+ AG LI G+ + AC Sbjct: 184 EIVSHETGIDSAIADKLVSIAERARNLKGHGLDEGISTRMLIYAGNLIAKGVDVHAACRM 243 Query: 247 TIVVPLTDDADTRNTL 262 +V P+TDD D R+ L Sbjct: 244 ALVRPITDDPDMRDAL 259 >ref|YP_115145.1| cbbQ protein [Methylococcus capsulatus str. Bath] gb|AAU91166.1| cbbQ protein [Methylococcus capsulatus str. Bath] Length = 266 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/254 (73%), Positives = 212/254 (83%) Query: 9 DQYRIREEPYYRPLKDEVELFGAAYANRMPVMLKGPTGCGKTRFIEYMAWRLGRPLITVA 68 +QY I+E PYYR DEVELF AAYA RMPVMLKGPTGCGKTRF+EYMAW+L RPLITVA Sbjct: 5 EQYLIQERPYYRATADEVELFEAAYAARMPVMLKGPTGCGKTRFVEYMAWKLKRPLITVA 64 Query: 69 CHEDMTAADLVGRWLLDAEGTVWSDGPLTTAVRLGAICYLDEIVEARQDTTVVIHPLTDD 128 C+EDMTA+DLVGR+LLDA GT W DGPLT A R+GAICYLDE+VEARQDTTVVIHPLTD Sbjct: 65 CNEDMTASDLVGRFLLDASGTRWQDGPLTLAARIGAICYLDEVVEARQDTTVVIHPLTDH 124 Query: 129 RRVLPLEKRGELIHAHSDFQLVISYNPGYQSAIKDLKESTKQRFAALDFGYPDRPVETEV 188 RR LPL+K+GEL+HAH DFQLVISYNPGYQ+ +KDLK+STKQRF ALDFGYP+ VE +V Sbjct: 125 RRTLPLDKKGELVHAHPDFQLVISYNPGYQNLLKDLKQSTKQRFGALDFGYPETAVEVDV 184 Query: 189 VSREAGIEPNLADLLVKIAQHSRNLKGQGLDEGASTRMLVNAGRLIGCGISLEKACETTI 248 VS E GI+P +A+ LV+IA +RNLKG GLDEG STR+LV AG LI GI AC T+ Sbjct: 185 VSHETGIDPKIAEKLVQIAHRARNLKGHGLDEGISTRLLVYAGHLIAKGIEPRAACMMTL 244 Query: 249 VVPLTDDADTRNTL 262 V PLTDD D R+TL Sbjct: 245 VRPLTDDPDMRDTL 258 >ref|YP_003695076.1| ATPase [Starkeya novella DSM 506] gb|ADH90457.1| ATPase associated with various cellular activities AAA_5 [Starkeya novella DSM 506] Length = 270 Score = 392 bits (1008), Expect = e-107, Method: Compositional matrix adjust. Identities = 191/262 (72%), Positives = 214/262 (81%) Query: 8 LDQYRIREEPYYRPLKDEVELFGAAYANRMPVMLKGPTGCGKTRFIEYMAWRLGRPLITV 67 L YRI EPYYRP+ +EV +F AA+ +R+PVMLKGPTGCGKTRF+EYMAWRLGRPLITV Sbjct: 7 LSAYRIATEPYYRPVGEEVAVFEAAWRHRLPVMLKGPTGCGKTRFVEYMAWRLGRPLITV 66 Query: 68 ACHEDMTAADLVGRWLLDAEGTVWSDGPLTTAVRLGAICYLDEIVEARQDTTVVIHPLTD 127 A HEDMTAADL GR+LL EGT+W DGPLT AVR GAICYLDEIVEARQDTTVVIHPLTD Sbjct: 67 AAHEDMTAADLAGRFLLTPEGTIWHDGPLTQAVRYGAICYLDEIVEARQDTTVVIHPLTD 126 Query: 128 DRRVLPLEKRGELIHAHSDFQLVISYNPGYQSAIKDLKESTKQRFAALDFGYPDRPVETE 187 RR+LPLEKR EL+ AH+DFQLVISYNPGYQSA+KDLKESTKQRF A+DF YP +E E Sbjct: 127 ARRMLPLEKRNELVPAHADFQLVISYNPGYQSAVKDLKESTKQRFVAIDFDYPAPALEAE 186 Query: 188 VVSREAGIEPNLADLLVKIAQHSRNLKGQGLDEGASTRMLVNAGRLIGCGISLEKACETT 247 +V REAG + LA LV IA SRNLKGQGLDEGASTRML++AGRL G+ L A Sbjct: 187 IVMREAGADLALARTLVAIAACSRNLKGQGLDEGASTRMLIHAGRLAAGGVPLATAVTAG 246 Query: 248 IVVPLTDDADTRNTLRDVISAC 269 IV+P+TDDAD R L + ISAC Sbjct: 247 IVLPMTDDADVRRALGEAISAC 268 >gb|ADI18224.1| moxr-like ATPases [uncultured gamma proteobacterium HF0200_40H22] Length = 277 Score = 392 bits (1007), Expect = e-107, Method: Compositional matrix adjust. Identities = 183/262 (69%), Positives = 219/262 (83%) Query: 8 LDQYRIREEPYYRPLKDEVELFGAAYANRMPVMLKGPTGCGKTRFIEYMAWRLGRPLITV 67 +DQY I EPYY+PL +EV F AA+A R+P+MLKGPTGCGKTRFIEYMA+RL +PLITV Sbjct: 15 IDQYFIESEPYYQPLANEVGFFEAAFAERLPMMLKGPTGCGKTRFIEYMAYRLKKPLITV 74 Query: 68 ACHEDMTAADLVGRWLLDAEGTVWSDGPLTTAVRLGAICYLDEIVEARQDTTVVIHPLTD 127 +CHEDMTA+DLVGR+LLD +GT+W DGPLT AVR GAICYLDEIVEARQDTTVVIH LTD Sbjct: 75 SCHEDMTASDLVGRYLLDGDGTIWHDGPLTLAVRHGAICYLDEIVEARQDTTVVIHSLTD 134 Query: 128 DRRVLPLEKRGELIHAHSDFQLVISYNPGYQSAIKDLKESTKQRFAALDFGYPDRPVETE 187 DRRVLPLEKR EL+ AH DFQ+VISYNPGYQS +KDLKESTKQRF+ALDF YPD +E + Sbjct: 135 DRRVLPLEKRNELVTAHPDFQMVISYNPGYQSVLKDLKESTKQRFSALDFQYPDTSLEAD 194 Query: 188 VVSREAGIEPNLADLLVKIAQHSRNLKGQGLDEGASTRMLVNAGRLIGCGISLEKACETT 247 +V+ E+GI+ +A LV IA+ SRNLKG GLDEGASTR L+ AG+L+ G+SL+ AC+ Sbjct: 195 IVAHESGIDLEVALKLVNIAERSRNLKGFGLDEGASTRTLIYAGKLVKRGLSLQDACQMA 254 Query: 248 IVVPLTDDADTRNTLRDVISAC 269 +V+P+TDD R++L ISAC Sbjct: 255 LVLPITDDPQLRDSLSTAISAC 276 >gb|AAL40973.1|AF447860_2 CbbQ [Methylococcus capsulatus] Length = 266 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 186/254 (73%), Positives = 211/254 (83%) Query: 9 DQYRIREEPYYRPLKDEVELFGAAYANRMPVMLKGPTGCGKTRFIEYMAWRLGRPLITVA 68 +QY I+E PYYR DEVELF A YA RMPVMLKGPTGCGKTRF+EYMAW+L RPLITVA Sbjct: 5 EQYLIQERPYYRATADEVELFEADYAARMPVMLKGPTGCGKTRFVEYMAWKLKRPLITVA 64 Query: 69 CHEDMTAADLVGRWLLDAEGTVWSDGPLTTAVRLGAICYLDEIVEARQDTTVVIHPLTDD 128 C+EDMTA+DLVGR+LLDA GT W DGPLT A R+GAICYLDE+VEARQDTTVVIHPLTD Sbjct: 65 CNEDMTASDLVGRFLLDASGTRWQDGPLTLAARIGAICYLDEVVEARQDTTVVIHPLTDH 124 Query: 129 RRVLPLEKRGELIHAHSDFQLVISYNPGYQSAIKDLKESTKQRFAALDFGYPDRPVETEV 188 RR LPL+K+GEL+HAH DFQLVISYNPGYQ+ +KDLK+STKQRF ALDFGYP+ VE +V Sbjct: 125 RRTLPLDKKGELVHAHPDFQLVISYNPGYQNLLKDLKQSTKQRFGALDFGYPETAVEVDV 184 Query: 189 VSREAGIEPNLADLLVKIAQHSRNLKGQGLDEGASTRMLVNAGRLIGCGISLEKACETTI 248 VS E GI+P +A+ LV+IA +RNLKG GLDEG STR+LV AG LI GI AC T+ Sbjct: 185 VSHETGIDPKIAEKLVQIAHRARNLKGHGLDEGISTRLLVYAGHLIAKGIEPRAACMMTL 244 Query: 249 VVPLTDDADTRNTL 262 V PLTDD D R+TL Sbjct: 245 VRPLTDDPDMRDTL 258