BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0095.p (289 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_05065171.1| branched-chain amino acid ABC-type transport ... 296 3e-78 ref|ZP_01880192.1| Branched-chain amino acid ABC-type transport ... 293 2e-77 ref|ZP_01739767.1| Branched-chain amino acid ABC-type transport ... 275 6e-72 ref|ZP_01440633.1| hypothetical protein FP2506_17319 [Fulvimarin... 272 4e-71 ref|ZP_02165284.1| branched-chain amino acid ABC transporter, pe... 260 2e-67 >ref|ZP_05065171.1| branched-chain amino acid ABC-type transport system, permease component [Octadecabacter antarcticus 238] gb|EDY90410.1| branched-chain amino acid ABC-type transport system, permease component [Octadecabacter antarcticus 238] Length = 289 Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust. Identities = 153/288 (53%), Positives = 212/288 (73%) Query: 1 VDQFIEQIVTGLSIGSILLLVALGLSIIYGSMGIINLAHGEFVMLGAYAAWVFHTYLGLG 60 +D Q+ GLS+ SILL++ALGL+IIYG+MG+INLAHGEFVMLGAY W YLG G Sbjct: 1 MDVVFNQLFAGLSMASILLIIALGLAIIYGAMGVINLAHGEFVMLGAYTTWACQHYLGFG 60 Query: 61 LLASLVPIFLVVATFGWVIERYVLSLLNNRPLDTILATWGVGIMLQQAVRLMVGSELRYV 120 +L SL +F+VV GW+IER ++ L +RPLDTILATWG+GIMLQQ VR+++G E R+V Sbjct: 61 ILLSLPFVFVVVGAIGWLIERTIVQRLYDRPLDTILATWGIGIMLQQLVRIVIGPESRFV 120 Query: 121 QLPPALSDSMDVFGIPVSSYRVFLFVVSIALFVATWLLMNRTTVGMKLRAIIQDRSVAAS 180 P L ++++ + +S+YR+F+ SIA+ +ATW L+ +T G KLRA+IQ+RS++ Sbjct: 121 SGPDFLRGNLEIGNVVMSNYRIFVIFFSIAVLLATWALLTKTEFGTKLRAVIQNRSISEC 180 Query: 181 FGINAKRVYALTFAYGAGLAGLAGALVSPLKSVSPDMGTGYVVDAFMVVVLGGVQSLAGT 240 +GI +KR+Y+LTFAYGAGLAG+AG L++PL S P MGT VVDAF+VV++GG+ S+ G Sbjct: 181 YGIESKRIYSLTFAYGAGLAGIAGTLITPLFSTIPTMGTSLVVDAFLVVIIGGLGSIIGA 240 Query: 241 VASAFILGELSGGIAFLQNDTVAKAIVLLAIVVLIRFRPEGLFTARVR 288 A+A ++GEL+ + + NDT+ + VL ++VLIR RP GLF R Sbjct: 241 AAAAVMIGELTAMFSLVINDTLGRIGVLACVIVLIRLRPRGLFPENTR 288 >ref|ZP_01880192.1| Branched-chain amino acid ABC-type transport system, permease component [Roseovarius sp. TM1035] gb|EDM31094.1| Branched-chain amino acid ABC-type transport system, permease component [Roseovarius sp. TM1035] Length = 289 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 154/288 (53%), Positives = 215/288 (74%) Query: 1 VDQFIEQIVTGLSIGSILLLVALGLSIIYGSMGIINLAHGEFVMLGAYAAWVFHTYLGLG 60 +D + Q+ GLS+ SILL++ALGL+IIYG+MG+INLAHGEFVMLGAYAAW +Y G Sbjct: 1 MDVILNQLFAGLSMASILLMIALGLAIIYGAMGVINLAHGEFVMLGAYAAWALQSYAGFS 60 Query: 61 LLASLVPIFLVVATFGWVIERYVLSLLNNRPLDTILATWGVGIMLQQAVRLMVGSELRYV 120 ++ +L +F+ VA GW+IE+ ++ L +RPLDTILATWG+GI+LQQ VRL VG+E R+V Sbjct: 61 IIVALPFVFIAVAAVGWIIEKVIVQRLYHRPLDTILATWGIGIILQQLVRLSVGAESRFV 120 Query: 121 QLPPALSDSMDVFGIPVSSYRVFLFVVSIALFVATWLLMNRTTVGMKLRAIIQDRSVAAS 180 + P LS + + G+ +S+YR+F+ V S+++ A+W LM +T GMKLRA+IQ+R ++ Sbjct: 121 KGPEILSGNTQIGGLIMSNYRLFVIVFSLSVLAASWALMTKTEFGMKLRAVIQNRKISEC 180 Query: 181 FGINAKRVYALTFAYGAGLAGLAGALVSPLKSVSPDMGTGYVVDAFMVVVLGGVQSLAGT 240 +GI AK +Y+ TFAYGAGLAG+AGAL++PL S P MGTG VVDAF+VV++GG+ SL G Sbjct: 181 YGIEAKNIYSFTFAYGAGLAGIAGALITPLFSTIPTMGTGLVVDAFLVVIVGGLGSLLGA 240 Query: 241 VASAFILGELSGGIAFLQNDTVAKAIVLLAIVVLIRFRPEGLFTARVR 288 ++ ++GE + + L NDT+ + VL I+VLIRFRP GLF + R Sbjct: 241 ATASVLIGEATALFSMLFNDTLGRIAVLAGIIVLIRFRPRGLFPSNTR 288 >ref|ZP_01739767.1| Branched-chain amino acid ABC-type transport system, permease component [Marinobacter sp. ELB17] gb|EAZ97355.1| Branched-chain amino acid ABC-type transport system, permease component [Marinobacter sp. ELB17] Length = 289 Score = 275 bits (703), Expect = 6e-72, Method: Compositional matrix adjust. Identities = 145/288 (50%), Positives = 213/288 (73%) Query: 1 VDQFIEQIVTGLSIGSILLLVALGLSIIYGSMGIINLAHGEFVMLGAYAAWVFHTYLGLG 60 + ++ +I GLS+ SILL+VALGL+IIYG+MG+INLAHG+FVM+GAY AW + G+G Sbjct: 1 MHSWLNEIFIGLSLTSILLMVALGLAIIYGTMGVINLAHGQFVMIGAYVAWFLQSQFGIG 60 Query: 61 LLASLVPIFLVVATFGWVIERYVLSLLNNRPLDTILATWGVGIMLQQAVRLMVGSELRYV 120 ++ L IF+ A G +ER ++ L RPLDTILATWG+GI+L+Q VR + GS+ RYV Sbjct: 61 IIVGLPLIFIAGALLGLAVERTIIQRLYTRPLDTILATWGIGIVLEQLVRGLFGSDSRYV 120 Query: 121 QLPPALSDSMDVFGIPVSSYRVFLFVVSIALFVATWLLMNRTTVGMKLRAIIQDRSVAAS 180 P L ++ + G+ +S YR+F+ ++ TW L+ RT G KLRA+IQ++ ++ Sbjct: 121 ARPEFLDGNLILAGVHMSYYRLFIIGFALLTLAVTWFLLFRTEFGTKLRAVIQNKEISEC 180 Query: 181 FGINAKRVYALTFAYGAGLAGLAGALVSPLKSVSPDMGTGYVVDAFMVVVLGGVQSLAGT 240 +G++A RVYA+TFAYGAGLA +AGAL++P+ SV+P MGTG VVDAF+VV++GGV S+ GT Sbjct: 181 YGVSANRVYAVTFAYGAGLAAIAGALITPMVSVTPTMGTGVVVDAFLVVIVGGVGSIVGT 240 Query: 241 VASAFILGELSGGIAFLQNDTVAKAIVLLAIVVLIRFRPEGLFTARVR 288 A+A ++GE + +++L ++T A+ ++LL ++VLIRFRP+GLF +VR Sbjct: 241 AAAALMIGEATAWLSYLLSETTARILILLGVIVLIRFRPQGLFPDKVR 288 >ref|ZP_01440633.1| hypothetical protein FP2506_17319 [Fulvimarina pelagi HTCC2506] gb|EAU39858.1| hypothetical protein FP2506_17319 [Fulvimarina pelagi HTCC2506] Length = 291 Score = 272 bits (696), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 155/286 (54%), Positives = 211/286 (73%) Query: 4 FIEQIVTGLSIGSILLLVALGLSIIYGSMGIINLAHGEFVMLGAYAAWVFHTYLGLGLLA 63 F Q+ GLS SILL++A GL+IIYGSMG+INLAHGEFVMLGAYA W T+ GLG+L Sbjct: 6 FFNQLFAGLSTASILLMIAAGLAIIYGSMGVINLAHGEFVMLGAYATWALQTFFGLGMLI 65 Query: 64 SLVPIFLVVATFGWVIERYVLSLLNNRPLDTILATWGVGIMLQQAVRLMVGSELRYVQLP 123 SL +F+ + GW+IE+ ++S L NRPLDTILATWGVGI+LQQA+ L +GS+ R+VQ P Sbjct: 66 SLPLVFVAIGAVGWLIEKGIVSRLYNRPLDTILATWGVGIVLQQAITLGIGSQSRFVQRP 125 Query: 124 PALSDSMDVFGIPVSSYRVFLFVVSIALFVATWLLMNRTTVGMKLRAIIQDRSVAASFGI 183 ++ + +S+YR+F+ VS+ + + T+LL+ RT G KLRA+IQ+R ++ +GI Sbjct: 126 EIFDGNLFFGDLVISNYRLFILGVSLGMLLVTYLLLTRTEFGTKLRAVIQNREISECYGI 185 Query: 184 NAKRVYALTFAYGAGLAGLAGALVSPLKSVSPDMGTGYVVDAFMVVVLGGVQSLAGTVAS 243 A+RVY LTFAYGA LAG+AGALV+PL S +P MGT VVDAF+VV++GGV SL GT + Sbjct: 186 RAERVYGLTFAYGAALAGIAGALVTPLISTTPTMGTTLVVDAFLVVIVGGVGSLVGTALA 245 Query: 244 AFILGELSGGIAFLQNDTVAKAIVLLAIVVLIRFRPEGLFTARVRA 289 + ++GE S ++ + NDT + ++L+AI++LIRFRP GL VR Sbjct: 246 SGLIGEASAMLSMIFNDTTGRILLLVAIILLIRFRPTGLIPQTVRG 291 >ref|ZP_02165284.1| branched-chain amino acid ABC transporter, permease component [Hoeflea phototrophica DFL-43] gb|EDQ34768.1| branched-chain amino acid ABC transporter, permease component [Hoeflea phototrophica DFL-43] Length = 291 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 132/275 (48%), Positives = 201/275 (73%), Gaps = 1/275 (0%) Query: 11 GLSIGSILLLVALGLSIIYGSMGIINLAHGEFVMLGAYAAWVFHTYLGLGLLASLVPIFL 70 GLSIGS+ L+ ALGL+IIYG+ G+IN+AHGE +MLGAY+ ++ T LGL + F+ Sbjct: 13 GLSIGSVFLVAALGLAIIYGTAGVINMAHGELIMLGAYSTFMMQTVLGLPFFICIPLSFV 72 Query: 71 VVATFGWVIERYVLSLLNNRPLDTILATWGVGIMLQQAVRLMVGSELRYVQLPPALSDSM 130 +V G++IE+ ++S L NRPLDT+LATWGV ++L Q VR++ GS+ +YV++P LS ++ Sbjct: 73 IVGFIGYLIEKVLISSLYNRPLDTLLATWGVSLVLMQGVRIIFGSDPKYVEVPSFLSTNI 132 Query: 131 DVFGIPVSSYRVFLFVVSIALFVATWLLMNRTTVGMKLRAIIQDRSVAASFGINAKRVYA 190 D+ + +S++R+F+ + + + +ATW L RTT G+K+RA+ Q++ +AASFGIN+ R+Y+ Sbjct: 133 DLGIVNLSTFRLFVMFICLIMVLATWYLFYRTTFGIKVRAVTQNKDMAASFGINSSRIYS 192 Query: 191 LTFAYGAGLAGLAGALVSPLKSVSPDMGTGYVVDAFMVVVLGGVQSLAGTVASAFILGEL 250 +TFA GAGLAG+AG+L + V P MGT YVV+AF++VV GG L +ASA + G++ Sbjct: 193 ITFAIGAGLAGVAGSLFGAMNIVLPTMGTSYVVEAFLMVVAGGGGLLGSILASA-LTGQI 251 Query: 251 SGGIAFLQNDTVAKAIVLLAIVVLIRFRPEGLFTA 285 AF+ NDT A+ +V + IV+ +RFRP+G+ +A Sbjct: 252 QSAFAFIYNDTYARFLVFVLIVIFLRFRPQGMISA 286