BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0090.p (519 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772882.1| histidine ammonia-lyase [Bradyrhizobium japonic... 829 0.0 ref|YP_001242267.1| histidine ammonia-lyase [Bradyrhizobium sp. ... 803 0.0 ref|YP_001203720.1| histidine ammonia-lyase [Bradyrhizobium sp. ... 775 0.0 ref|ZP_08861078.1| histidine ammonia-lyase [Ruegeria sp. TW15] 635 e-180 ref|YP_167417.1| histidine ammonia-lyase [Ruegeria pomeroyi DSS-... 635 e-180 >ref|NP_772882.1| histidine ammonia-lyase [Bradyrhizobium japonicum USDA 110] sp|Q89GV3.1|HUTH_BRAJA RecName: Full=Histidine ammonia-lyase; Short=Histidase dbj|BAC51507.1| histidine ammonia-lyase [Bradyrhizobium japonicum USDA 110] Length = 519 Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust. Identities = 449/519 (86%), Positives = 472/519 (90%) Query: 1 MSDWDAPVVVTPGTVGLDVLARVLAGAPIVLDPSCWPRVEATAEIVAKAARIDVPVYGIN 60 M++ DA +VV PGTV LD LARVLAG P+VLDPS WPRVEA A IVAKAA+ D PVYGIN Sbjct: 1 MTEQDAAIVVKPGTVSLDDLARVLAGQPVVLDPSFWPRVEAAAAIVAKAAQADTPVYGIN 60 Query: 61 TGFGKLASTRIAPDQTALLQRNLILSHCCGVGAATPEPIVRLMMALKVISLGRGASGVRR 120 TGFGKLAS RI PDQTALLQRNLI+SHCCGVG ATPEPIVRLMMALK+ISLGRGASGVRR Sbjct: 61 TGFGKLASKRIPPDQTALLQRNLIVSHCCGVGPATPEPIVRLMMALKIISLGRGASGVRR 120 Query: 121 DVIEQLQGMLARGVSPLVPQQGSVGASGDLAPLAHMTAVMIGEGQAFLDGKIVPGREALA 180 +VIEQLQGMLAR V PLVPQQGSVGASGDLAPLAHMTAVMIGEGQA +DGK V G EALA Sbjct: 121 EVIEQLQGMLARRVCPLVPQQGSVGASGDLAPLAHMTAVMIGEGQAIVDGKTVSGGEALA 180 Query: 181 AAGLTPLTLGPKEGLALINGTQFSTAYAISGLLRAHRLACAALVTGALSVDAAMASTVPF 240 AAGL PLTLGPKEGLALINGTQFSTAYAISG+LR LA AALVTGALSVDAAMAST PF Sbjct: 181 AAGLAPLTLGPKEGLALINGTQFSTAYAISGVLRGFHLARAALVTGALSVDAAMASTAPF 240 Query: 241 RPEIQSLRGHGGQIAAAAALTALLDGSDIRQSHLEGDERVQDPYCLRCQPQVAGAVLDLL 300 RPEIQ+LRGH GQIAAAA LTALLDGSDIR SHLEGDERVQDPYCLRCQPQVAGA LDL+ Sbjct: 241 RPEIQALRGHAGQIAAAATLTALLDGSDIRLSHLEGDERVQDPYCLRCQPQVAGAALDLI 300 Query: 301 AQAARSLTIEANAVTDNPLVLVDTGEIVSGGNFHAEPVAFAADQIALALSEIGATSERRI 360 Q AR+L +EANAVTDNPLVLV+TGEIVSGGNFHAEPVAFAAD IALALSEIGA SERRI Sbjct: 301 TQTARALIVEANAVTDNPLVLVETGEIVSGGNFHAEPVAFAADTIALALSEIGAISERRI 360 Query: 361 ATLVDPALNFGLPPFLTPEPGINSGFMIAEVTAAALYAENKQRAMPCSIDSTPTSANQED 420 ATLVDPALNFGLPPFLTP+PG+NSGFMIAEVTAAALYAENKQRA CSIDSTPTSANQED Sbjct: 361 ATLVDPALNFGLPPFLTPDPGVNSGFMIAEVTAAALYAENKQRAAACSIDSTPTSANQED 420 Query: 421 HVSMAAHAARRLSDMADNLASILGIELLVAAQGITLRAPHATSAPLAAAIATLRAHVPAL 480 HVSMAAHAARRL+DMADNLA+ILGIELLVAAQGITLRAPHATSAPL A IA LR VPAL Sbjct: 421 HVSMAAHAARRLADMADNLAAILGIELLVAAQGITLRAPHATSAPLVAVIAALREQVPAL 480 Query: 481 AADRYMADDLARAASLIRADALPAAAIAVLPIDPFPKLA 519 ADRYMA DLA+AA+L+ ADALPAAAI VLP DPFP+LA Sbjct: 481 GADRYMAGDLAKAAALVEADALPAAAIGVLPSDPFPRLA 519 >ref|YP_001242267.1| histidine ammonia-lyase [Bradyrhizobium sp. BTAi1] sp|A5EQB7.1|HUTH_BRASB RecName: Full=Histidine ammonia-lyase; Short=Histidase gb|ABQ38361.1| histidine ammonia-lyase [Bradyrhizobium sp. BTAi1] Length = 515 Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust. Identities = 416/511 (81%), Positives = 444/511 (86%) Query: 8 VVVTPGTVGLDVLARVLAGAPIVLDPSCWPRVEATAEIVAKAARIDVPVYGINTGFGKLA 67 ++ PG V LD LARV AGA + LDPS WP VEA A IVAKAA+ PVYGINTGFGKLA Sbjct: 4 IIAAPGRVSLDDLARVYAGATLELDPSYWPDVEAAAAIVAKAAQGAEPVYGINTGFGKLA 63 Query: 68 STRIAPDQTALLQRNLILSHCCGVGAATPEPIVRLMMALKVISLGRGASGVRRDVIEQLQ 127 S RI PDQTA LQRNLILSHCCGVG TPE +VRLMMALK+ISLGRGASGVRR++IEQLQ Sbjct: 64 SKRIPPDQTAQLQRNLILSHCCGVGPVTPEAVVRLMMALKIISLGRGASGVRREIIEQLQ 123 Query: 128 GMLARGVSPLVPQQGSVGASGDLAPLAHMTAVMIGEGQAFLDGKIVPGREALAAAGLTPL 187 MLARGV P VPQQGSVGASGDLAPLAHMTAVMIGEGQAF+DG++VPGREALA AGL P+ Sbjct: 124 AMLARGVCPFVPQQGSVGASGDLAPLAHMTAVMIGEGQAFVDGRLVPGREALAHAGLAPV 183 Query: 188 TLGPKEGLALINGTQFSTAYAISGLLRAHRLACAALVTGALSVDAAMASTVPFRPEIQSL 247 TLGPKEGLALINGTQFSTAYA++GLLRAH L AALVTGALSVDAAMAST PFRPEIQ+L Sbjct: 184 TLGPKEGLALINGTQFSTAYALAGLLRAHDLLKAALVTGALSVDAAMASTAPFRPEIQAL 243 Query: 248 RGHGGQIAAAAALTALLDGSDIRQSHLEGDERVQDPYCLRCQPQVAGAVLDLLAQAARSL 307 RGH GQIAA LT LLDGS IR SHLEGDERVQDPYCLRCQPQVAGA LDLL Q AR+L Sbjct: 244 RGHPGQIAAGRVLTELLDGSAIRLSHLEGDERVQDPYCLRCQPQVAGAALDLLTQTARTL 303 Query: 308 TIEANAVTDNPLVLVDTGEIVSGGNFHAEPVAFAADQIALALSEIGATSERRIATLVDPA 367 EANAVTDNPLVLV TGEI+SGGNFHAEPVAFAADQIALALSE+GA SERRIATLVDPA Sbjct: 304 VTEANAVTDNPLVLVVTGEIISGGNFHAEPVAFAADQIALALSELGAISERRIATLVDPA 363 Query: 368 LNFGLPPFLTPEPGINSGFMIAEVTAAALYAENKQRAMPCSIDSTPTSANQEDHVSMAAH 427 LNFGLPPFLTP+PG+NSGFMIAEVTAAAL+AENKQRA+PCSIDSTPTSANQEDHVSMAAH Sbjct: 364 LNFGLPPFLTPQPGLNSGFMIAEVTAAALFAENKQRALPCSIDSTPTSANQEDHVSMAAH 423 Query: 428 AARRLSDMADNLASILGIELLVAAQGITLRAPHATSAPLAAAIATLRAHVPALAADRYMA 487 AARRL DMADNLA I+GIELLVAAQGI LR PH TSA L+A I LR HVPAL DRYMA Sbjct: 424 AARRLHDMADNLAHIIGIELLVAAQGIELRVPHGTSAALSAVIGALRVHVPALENDRYMA 483 Query: 488 DDLARAASLIRADALPAAAIAVLPIDPFPKL 518 DDLA+AA+++ L AA L DPFPKL Sbjct: 484 DDLAKAAAIVAGGVLADAARDALGRDPFPKL 514 >ref|YP_001203720.1| histidine ammonia-lyase [Bradyrhizobium sp. ORS 278] sp|A4YNK7.1|HUTH_BRASO RecName: Full=Histidine ammonia-lyase; Short=Histidase emb|CAL75483.1| Histidine ammonia-lyase (Histidase) [Bradyrhizobium sp. ORS 278] Length = 515 Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/511 (80%), Positives = 446/511 (87%) Query: 8 VVVTPGTVGLDVLARVLAGAPIVLDPSCWPRVEATAEIVAKAARIDVPVYGINTGFGKLA 67 ++ PG V D LARV AGA I L P+ WPRVEA A IVAKAA+ PVYGINTGFGKLA Sbjct: 4 IIAEPGHVSFDDLARVYAGAAIALGPAYWPRVEAAAAIVAKAAQGAEPVYGINTGFGKLA 63 Query: 68 STRIAPDQTALLQRNLILSHCCGVGAATPEPIVRLMMALKVISLGRGASGVRRDVIEQLQ 127 S RI PDQTALLQRNLILSHCCGVG ATPEPIVRLM+ALK+ISLGRGASGVRR +++QLQ Sbjct: 64 SKRIPPDQTALLQRNLILSHCCGVGPATPEPIVRLMIALKIISLGRGASGVRRQIVDQLQ 123 Query: 128 GMLARGVSPLVPQQGSVGASGDLAPLAHMTAVMIGEGQAFLDGKIVPGREALAAAGLTPL 187 MLA+GV P VPQQGSVGASGDLAPLAHMTAVMIGEGQAF++G++VPGREALA GL P+ Sbjct: 124 AMLAQGVCPFVPQQGSVGASGDLAPLAHMTAVMIGEGQAFVEGRLVPGREALAHVGLDPV 183 Query: 188 TLGPKEGLALINGTQFSTAYAISGLLRAHRLACAALVTGALSVDAAMASTVPFRPEIQSL 247 TLGPKEGLALINGTQFSTAYA++GL RA L AALVTGALSVDAAMAST PFRPEIQ+L Sbjct: 184 TLGPKEGLALINGTQFSTAYALAGLFRARDLLNAALVTGALSVDAAMASTAPFRPEIQAL 243 Query: 248 RGHGGQIAAAAALTALLDGSDIRQSHLEGDERVQDPYCLRCQPQVAGAVLDLLAQAARSL 307 RGH GQIAA LT L+DGS IR SHLEGDERVQDPYCLRCQPQVAGA LDLL QAAR+L Sbjct: 244 RGHPGQIAAGRVLTELVDGSAIRLSHLEGDERVQDPYCLRCQPQVAGAALDLLTQAARTL 303 Query: 308 TIEANAVTDNPLVLVDTGEIVSGGNFHAEPVAFAADQIALALSEIGATSERRIATLVDPA 367 EANAVTDNPLVLV+TGEI+SGGNFHAEPVAFAADQIALALSE+GA SERRIATLVDPA Sbjct: 304 VNEANAVTDNPLVLVETGEIISGGNFHAEPVAFAADQIALALSELGAISERRIATLVDPA 363 Query: 368 LNFGLPPFLTPEPGINSGFMIAEVTAAALYAENKQRAMPCSIDSTPTSANQEDHVSMAAH 427 LNFGLPPFLTP+PG+NSGFMIAEVTAAAL+AENKQRA+PCSIDSTPTSANQEDHVSMAAH Sbjct: 364 LNFGLPPFLTPQPGLNSGFMIAEVTAAALFAENKQRALPCSIDSTPTSANQEDHVSMAAH 423 Query: 428 AARRLSDMADNLASILGIELLVAAQGITLRAPHATSAPLAAAIATLRAHVPALAADRYMA 487 AARRL DMADNLA I+GIELLVAAQGI LR PH TSA L+A I LR+HVPAL +DRYMA Sbjct: 424 AARRLHDMADNLAHIIGIELLVAAQGIELRVPHGTSAALSAVIGALRSHVPALESDRYMA 483 Query: 488 DDLARAASLIRADALPAAAIAVLPIDPFPKL 518 DDLA+AA+L+ AL AA L D FP+L Sbjct: 484 DDLAKAAALVAGGALARAANVALGRDSFPRL 514 >ref|ZP_08861078.1| histidine ammonia-lyase [Ruegeria sp. TW15] Length = 511 Score = 635 bits (1639), Expect = e-180, Method: Compositional matrix adjust. Identities = 330/506 (65%), Positives = 388/506 (76%), Gaps = 1/506 (0%) Query: 7 PVVVTPGTVGLDVLARVL-AGAPIVLDPSCWPRVEATAEIVAKAARIDVPVYGINTGFGK 65 P+ +TPG V LD LA + A I LD +C P+V+A A +A+AA PVYG+NTGFGK Sbjct: 3 PLPLTPGQVSLDQLAEIYWTEAAISLDDACRPKVDAAAARIAQAAEGTEPVYGVNTGFGK 62 Query: 66 LASTRIAPDQTALLQRNLILSHCCGVGAATPEPIVRLMMALKVISLGRGASGVRRDVIEQ 125 LAS +IA T+ LQRNLILSHCCGVG A P + RLMM+LK++S GRGASGVR +++E Sbjct: 63 LASHKIAAKDTSTLQRNLILSHCCGVGPAVPRRLARLMMSLKLLSFGRGASGVRWELVEL 122 Query: 126 LQGMLARGVSPLVPQQGSVGASGDLAPLAHMTAVMIGEGQAFLDGKIVPGREALAAAGLT 185 LQ MLARGV+P++P QGSVGASGDLAPLAHMTAV+IGEG+A ++G ++PG EAL AAGL Sbjct: 123 LQQMLARGVTPVIPAQGSVGASGDLAPLAHMTAVVIGEGEAEVNGSVMPGAEALRAAGLE 182 Query: 186 PLTLGPKEGLALINGTQFSTAYAISGLLRAHRLACAALVTGALSVDAAMASTVPFRPEIQ 245 P+ LGPKEGLA INGTQFSTA+A++GL R A ALV A S DA M ST P +PEI Sbjct: 183 PIQLGPKEGLAFINGTQFSTAFALAGLFEGWRSAQNALVISAASTDAIMGSTAPLQPEIH 242 Query: 246 SLRGHGGQIAAAAALTALLDGSDIRQSHLEGDERVQDPYCLRCQPQVAGAVLDLLAQAAR 305 +LRGH GQI AAAA+ A LDGS+IR+SH +GD RVQDPYC+RCQPQV GA +D++ QAA Sbjct: 243 ALRGHRGQIEAAAAMRATLDGSEIRESHRDGDTRVQDPYCIRCQPQVTGAAMDVIRQAAA 302 Query: 306 SLTIEANAVTDNPLVLVDTGEIVSGGNFHAEPVAFAADQIALALSEIGATSERRIATLVD 365 +L IEANA TDNPLVL D IVSGGNFHAEPV FAAD IALALSEIGA ++RRIA +VD Sbjct: 303 TLVIEANAATDNPLVLTDPDTIVSGGNFHAEPVGFAADMIALALSEIGAIAQRRIALMVD 362 Query: 366 PALNFGLPPFLTPEPGINSGFMIAEVTAAALYAENKQRAMPCSIDSTPTSANQEDHVSMA 425 PAL+F LPPFLTPEPG+NSG MIAEVT AAL +ENK A PC DSTPTSANQEDHVSMA Sbjct: 363 PALSFDLPPFLTPEPGLNSGLMIAEVTTAALMSENKHLANPCVTDSTPTSANQEDHVSMA 422 Query: 426 AHAARRLSDMADNLASILGIELLVAAQGITLRAPHATSAPLAAAIATLRAHVPALAADRY 485 AH ARRL M DNL ILGIELL AAQGI RAP ATS L + + LR +P+L DRY Sbjct: 423 AHGARRLGRMVDNLNYILGIELLCAAQGIEFRAPLATSKSLISVVGRLREDIPSLGDDRY 482 Query: 486 MADDLARAASLIRADALPAAAIAVLP 511 +A +L A SL+ + A+ AA +P Sbjct: 483 LAPELESAKSLVESGAVLQAAALTMP 508 >ref|YP_167417.1| histidine ammonia-lyase [Ruegeria pomeroyi DSS-3] sp|Q5LRD8.1|HUTH_SILPO RecName: Full=Histidine ammonia-lyase; Short=Histidase gb|AAV95458.1| histidine ammonia-lyase [Ruegeria pomeroyi DSS-3] Length = 512 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 331/496 (66%), Positives = 386/496 (77%), Gaps = 1/496 (0%) Query: 8 VVVTPGTVGLDVLARV-LAGAPIVLDPSCWPRVEATAEIVAKAARIDVPVYGINTGFGKL 66 + +TPG+ L+ LAR+ +P+ LDP+C P VEA A + AA DVPVYG+NTGFGKL Sbjct: 4 LTLTPGSATLEHLARIYFDESPVRLDPACRPAVEAAAARIRAAAAGDVPVYGVNTGFGKL 63 Query: 67 ASTRIAPDQTALLQRNLILSHCCGVGAATPEPIVRLMMALKVISLGRGASGVRRDVIEQL 126 AS ++AP TA LQRNLILSHCCGVGA P + RLMM LK++SLGRGASGVR ++I L Sbjct: 64 ASLKVAPQDTATLQRNLILSHCCGVGAPIPRRMARLMMVLKLLSLGRGASGVRWELITLL 123 Query: 127 QGMLARGVSPLVPQQGSVGASGDLAPLAHMTAVMIGEGQAFLDGKIVPGREALAAAGLTP 186 Q MLAR V+P++P QGSVGASGDLAPLAHMTAV+IG G+A G+ +PG EALA AGLTP Sbjct: 124 QEMLARDVTPVIPVQGSVGASGDLAPLAHMTAVIIGAGEAEYQGQRLPGAEALARAGLTP 183 Query: 187 LTLGPKEGLALINGTQFSTAYAISGLLRAHRLACAALVTGALSVDAAMASTVPFRPEIQS 246 + LGPKEGLA INGTQFSTA+A++GL A R A ++LVT ALS DA M ST P +PEI + Sbjct: 184 IALGPKEGLAFINGTQFSTAFALAGLFGAWRAATSSLVTAALSTDAIMGSTAPLQPEIHA 243 Query: 247 LRGHGGQIAAAAALTALLDGSDIRQSHLEGDERVQDPYCLRCQPQVAGAVLDLLAQAARS 306 LRGH GQI AAA + ALLDGS+IR+SH EGD RVQDPYC+RCQPQV GA +D+L QAA++ Sbjct: 244 LRGHRGQIDAAARMRALLDGSEIRESHREGDTRVQDPYCIRCQPQVTGAAMDVLRQAAQT 303 Query: 307 LTIEANAVTDNPLVLVDTGEIVSGGNFHAEPVAFAADQIALALSEIGATSERRIATLVDP 366 L IEANA TDNPLVL + IVSGGNFHAEPV FAAD IALALSEIGA ++RR+A +VDP Sbjct: 304 LEIEANAATDNPLVLAEADMIVSGGNFHAEPVGFAADLIALALSEIGAIAQRRVALMVDP 363 Query: 367 ALNFGLPPFLTPEPGINSGFMIAEVTAAALYAENKQRAMPCSIDSTPTSANQEDHVSMAA 426 L+F LPPFLTP+PG+NSG MIAEVT AAL +ENK A PC DSTPTSANQEDHVSMAA Sbjct: 364 TLSFDLPPFLTPKPGLNSGLMIAEVTTAALMSENKHLANPCVTDSTPTSANQEDHVSMAA 423 Query: 427 HAARRLSDMADNLASILGIELLVAAQGITLRAPHATSAPLAAAIATLRAHVPALAADRYM 486 H A RL M +NL ILG+ELL AAQGI RAP TS L AA+A LRA VP L DRYM Sbjct: 424 HGAVRLGRMVENLHYILGVELLCAAQGIEFRAPLQTSTALQAAVARLRAEVPRLEEDRYM 483 Query: 487 ADDLARAASLIRADAL 502 A ++ AA L+ A AL Sbjct: 484 APEIETAARLVGAGAL 499