BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0085.p (351 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772886.1| ABC transporter substrate-binding protein [Brad... 599 e-169 ref|YP_001242271.1| ABC transporter substrate-binding protein [B... 568 e-160 ref|YP_001203716.1| ABC transporter substrate-binding protein [B... 559 e-157 ref|YP_001769171.1| NMT1/THI5-like domain-containing protein [Me... 481 e-134 gb|EGP58508.1| ABC transporter, substrate binding protein [Agrob... 479 e-133 >ref|NP_772886.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51511.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 314 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 292/314 (92%), Positives = 305/314 (97%) Query: 38 MRSFKLFSAIAVLLASTAASADDVKVGVGISGWTGFAPLTLAKEAGIFKKNGLDVTLKKI 97 MRS K+F+ I L AST ADDVKVGVGISGWTGFAPLTLAKEAGIFKKNGLDVT+KKI Sbjct: 1 MRSSKVFATIIALAASTPVLADDVKVGVGISGWTGFAPLTLAKEAGIFKKNGLDVTIKKI 60 Query: 98 PQKDRHLAIASGDIQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRNDVAAIKD 157 PQKDRHLAIASGDIQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRND+AAIKD Sbjct: 61 PQKDRHLAIASGDIQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRNDIAAIKD 120 Query: 158 LKGKTVAASAPGTSPYFALAWMLKKNGLSVKDVTVVNLEPAAAAQAFVSGQNDAAMTYEP 217 LKGKTVAASAPGTSPYFALAWMLKKNGL+ KDVTVVNLEPAAAAQAFVSGQNDAAMTYEP Sbjct: 121 LKGKTVAASAPGTSPYFALAWMLKKNGLTTKDVTVVNLEPAAAAQAFVSGQNDAAMTYEP 180 Query: 218 YLSTVRAAPDKGKIIATTLDYPIVMDTFGCTPKFLTDNPKAAQALADSYFEALDMIAKDQ 277 YLSTVRAAPDKGKIIATTLDYPIVMDTFGCTPKFL++NPKAAQALA+SYFEALD+IAKDQ Sbjct: 181 YLSTVRAAPDKGKIIATTLDYPIVMDTFGCTPKFLSENPKAAQALANSYFEALDLIAKDQ 240 Query: 278 AKSYEIMGADVKQSGEQFGNSAKYLRWQDKAANQKFFAGDFLTFNKDAAELLLEVGIIKA 337 AK+YEIMGADVKQ+GEQFGNSAKYLRWQDKAANQKFFAGDFLTFNKDAAELLLE+GIIKA Sbjct: 241 AKAYEIMGADVKQTGEQFGNSAKYLRWQDKAANQKFFAGDFLTFNKDAAELLLEIGIIKA 300 Query: 338 APKVEDIYDASFIK 351 APKVED+YDASFIK Sbjct: 301 APKVEDLYDASFIK 314 >ref|YP_001242271.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ38365.1| Putative ABC transporter (substrate-binding protein) [Bradyrhizobium sp. BTAi1] Length = 314 Score = 568 bits (1463), Expect = e-160, Method: Compositional matrix adjust. Identities = 279/314 (88%), Positives = 299/314 (95%) Query: 38 MRSFKLFSAIAVLLASTAASADDVKVGVGISGWTGFAPLTLAKEAGIFKKNGLDVTLKKI 97 MR FKL + A LLAST A ADDVKVG+GISGWTGFAPLTLAKEAGIFKKNGLDVT+KKI Sbjct: 1 MRRFKLLAVTAALLASTTAFADDVKVGIGISGWTGFAPLTLAKEAGIFKKNGLDVTIKKI 60 Query: 98 PQKDRHLAIASGDIQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRNDVAAIKD 157 PQKDRHLAIA+GD+QCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRND+A+IKD Sbjct: 61 PQKDRHLAIAAGDVQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRNDIASIKD 120 Query: 158 LKGKTVAASAPGTSPYFALAWMLKKNGLSVKDVTVVNLEPAAAAQAFVSGQNDAAMTYEP 217 LKGKTVAASAPGTSPYF LAWMLKKNGL+VKDVT+VNLEPAAAAQAFVSGQNDAAMTYEP Sbjct: 121 LKGKTVAASAPGTSPYFGLAWMLKKNGLTVKDVTIVNLEPAAAAQAFVSGQNDAAMTYEP 180 Query: 218 YLSTVRAAPDKGKIIATTLDYPIVMDTFGCTPKFLTDNPKAAQALADSYFEALDMIAKDQ 277 YLSTVRAAPDKGKIIATTLDYP+VMDTFGCTPKFL++NPKAA+ALADSY+EALD+IAKDQ Sbjct: 181 YLSTVRAAPDKGKIIATTLDYPMVMDTFGCTPKFLSENPKAAKALADSYYEALDLIAKDQ 240 Query: 278 AKSYEIMGADVKQSGEQFGNSAKYLRWQDKAANQKFFAGDFLTFNKDAAELLLEVGIIKA 337 AK+YEIMGADVKQ+ EQFGNSAKYLRWQDKAA+QKFF +F TFNKDAAELLLEVGIIK Sbjct: 241 AKAYEIMGADVKQTAEQFGNSAKYLRWQDKAASQKFFETEFKTFNKDAAELLLEVGIIKQ 300 Query: 338 APKVEDIYDASFIK 351 P VED+YDASFIK Sbjct: 301 IPNVEDLYDASFIK 314 >ref|YP_001203716.1| ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL75479.1| Putative ABC transporter (substrate-binding protein) [Bradyrhizobium sp. ORS 278] Length = 314 Score = 559 bits (1440), Expect = e-157, Method: Compositional matrix adjust. Identities = 278/314 (88%), Positives = 299/314 (95%) Query: 38 MRSFKLFSAIAVLLASTAASADDVKVGVGISGWTGFAPLTLAKEAGIFKKNGLDVTLKKI 97 MR F L + A LLAST+A ADDVKVG+GISGWTGFAPLTLAKEAGIFKKNGLDVT+KKI Sbjct: 1 MRKFGLLALTAALLASTSAFADDVKVGIGISGWTGFAPLTLAKEAGIFKKNGLDVTIKKI 60 Query: 98 PQKDRHLAIASGDIQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRNDVAAIKD 157 PQKDRHLAIA+GD+QCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRND+A+IKD Sbjct: 61 PQKDRHLAIAAGDVQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRNDIASIKD 120 Query: 158 LKGKTVAASAPGTSPYFALAWMLKKNGLSVKDVTVVNLEPAAAAQAFVSGQNDAAMTYEP 217 LKGKTVAASAPGTSPYF LAWMLKKNGL+VKDVT+VNLEPAAAAQAFVSGQNDAAMTYEP Sbjct: 121 LKGKTVAASAPGTSPYFGLAWMLKKNGLTVKDVTIVNLEPAAAAQAFVSGQNDAAMTYEP 180 Query: 218 YLSTVRAAPDKGKIIATTLDYPIVMDTFGCTPKFLTDNPKAAQALADSYFEALDMIAKDQ 277 YLSTVRAAPDKGKIIATTLDYP+VMDTFGCTPKFLT+NPKAA+ALADSY+EALD+I KDQ Sbjct: 181 YLSTVRAAPDKGKIIATTLDYPMVMDTFGCTPKFLTENPKAAKALADSYYEALDLIGKDQ 240 Query: 278 AKSYEIMGADVKQSGEQFGNSAKYLRWQDKAANQKFFAGDFLTFNKDAAELLLEVGIIKA 337 AK+YEIMGADVKQ+GEQFGNSAKYLRWQDKAA+QKFF +F TFNKDAA+LLLEVGIIK Sbjct: 241 AKAYEIMGADVKQTGEQFGNSAKYLRWQDKAASQKFFETEFKTFNKDAADLLLEVGIIKQ 300 Query: 338 APKVEDIYDASFIK 351 P VED+YDASFIK Sbjct: 301 IPNVEDLYDASFIK 314 >ref|YP_001769171.1| NMT1/THI5-like domain-containing protein [Methylobacterium sp. 4-46] gb|ACA16737.1| NMT1/THI5 like domain protein [Methylobacterium sp. 4-46] Length = 313 Score = 481 bits (1239), Expect = e-134, Method: Compositional matrix adjust. Identities = 227/292 (77%), Positives = 259/292 (88%) Query: 60 DVKVGVGISGWTGFAPLTLAKEAGIFKKNGLDVTLKKIPQKDRHLAIASGDIQCAATTVE 119 + KV +GISGWTGFAPLTLAKEAG+F+KNGLDVT+KKIPQ RHLAI SGD+QCAATTVE Sbjct: 22 ETKVTIGISGWTGFAPLTLAKEAGLFRKNGLDVTIKKIPQGSRHLAIRSGDVQCAATTVE 81 Query: 120 TWISWNANGVATKQIFQLDKSYGADGMAVRNDVAAIKDLKGKTVAASAPGTSPYFALAWM 179 TW++WNANGV TKQIFQLDKSYGADGMAVR ++ +IKDLKGKTVAAS PGTSPYFALAWM Sbjct: 82 TWVAWNANGVPTKQIFQLDKSYGADGMAVRGEIGSIKDLKGKTVAASVPGTSPYFALAWM 141 Query: 180 LKKNGLSVKDVTVVNLEPAAAAQAFVSGQNDAAMTYEPYLSTVRAAPDKGKIIATTLDYP 239 LK NGLS+KDV VVNLEP AAQAF++GQNDAAMTYEPYLS+VRAAP GKIIATTLDYP Sbjct: 142 LKANGLSLKDVKVVNLEPGPAAQAFIAGQNDAAMTYEPYLSSVRAAPQAGKIIATTLDYP 201 Query: 240 IVMDTFGCTPKFLTDNPKAAQALADSYFEALDMIAKDQAKSYEIMGADVKQSGEQFGNSA 299 IVMDTFGCTP FL NPKAA+ALA+SYFEALD+IAKD AK+YEIMGADVKQ+GE F SA Sbjct: 202 IVMDTFGCTPDFLAQNPKAAKALAESYFEALDLIAKDPAKAYEIMGADVKQTGEAFAASA 261 Query: 300 KYLRWQDKAANQKFFAGDFLTFNKDAAELLLEVGIIKAAPKVEDIYDASFIK 351 K+LRWQD+ AN+ FAG F+ +AA+LLLEVGIIK P+++ ++DASF+K Sbjct: 262 KFLRWQDREANRAAFAGPLQAFSAEAADLLLEVGIIKQKPEIDGLFDASFVK 313 >gb|EGP58508.1| ABC transporter, substrate binding protein [Agrobacterium tumefaciens F2] Length = 325 Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust. Identities = 231/319 (72%), Positives = 273/319 (85%), Gaps = 1/319 (0%) Query: 33 KGSTIMRSFKLFSAIAVLLASTAASADDVKVGVGISGWTGFAPLTLAKEAGIFKKNGLDV 92 KG IM+ + + IAVL AS+A++ + V +G+SGWTGFAPLTLAK+AGIF+KNGL V Sbjct: 8 KGVPIMKKTWVLATIAVL-ASSASAYAETSVTIGMSGWTGFAPLTLAKQAGIFEKNGLKV 66 Query: 93 TLKKIPQKDRHLAIASGDIQCAATTVETWISWNANGVATKQIFQLDKSYGADGMAVRNDV 152 +KKIPQ RHLA+ASGDIQCAATTVETWI+WNANGV + QIFQ+DKS+GADG+AVR+DV Sbjct: 67 DIKKIPQASRHLALASGDIQCAATTVETWIAWNANGVKSTQIFQMDKSHGADGIAVRSDV 126 Query: 153 AAIKDLKGKTVAASAPGTSPYFALAWMLKKNGLSVKDVTVVNLEPAAAAQAFVSGQNDAA 212 + + DLKGKTVAASAPGTSPYF LAW+LK+NGL++KDV VVNLEP AAQAFV+GQNDAA Sbjct: 127 SKVADLKGKTVAASAPGTSPYFFLAWILKENGLTLKDVKVVNLEPGPAAQAFVAGQNDAA 186 Query: 213 MTYEPYLSTVRAAPDKGKIIATTLDYPIVMDTFGCTPKFLTDNPKAAQALADSYFEALDM 272 MTYEPYLSTVRAAPDKGKI+ATTLDYP VMDTFGCTP FL DNP+AA+ALADSYF+ALD+ Sbjct: 187 MTYEPYLSTVRAAPDKGKILATTLDYPAVMDTFGCTPDFLKDNPQAAKALADSYFQALDL 246 Query: 273 IAKDQAKSYEIMGADVKQSGEQFGNSAKYLRWQDKAANQKFFAGDFLTFNKDAAELLLEV 332 I D KSYE MGADVKQ+GE F SAK+L WQDKAANQKFF G+F TF++ +A+LLLE+ Sbjct: 247 IKSDPEKSYETMGADVKQAGEAFAASAKFLEWQDKAANQKFFEGEFKTFSEKSADLLLEI 306 Query: 333 GIIKAAPKVEDIYDASFIK 351 G+IKA P + + D SFIK Sbjct: 307 GVIKAKPDLSTLADTSFIK 325