BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0077.p         (333 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001208702.1| branched chain amino acid ABC transporter pe...   559   e-157
ref|YP_001236829.1| branched chain amino acid ABC transporter pe...   558   e-157
ref|NP_946602.1| putative branched-chain amino acid transport sy...   553   e-155
ref|YP_484874.1| inner-membrane translocator [Rhodopseudomonas p...   546   e-153
ref|YP_570985.1| inner-membrane translocator [Rhodopseudomonas p...   542   e-152

>ref|YP_001208702.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. ORS 278]
 emb|CAL80487.1| Putative branched-chain amino acid ABC transporter, permease
           protein [Bradyrhizobium sp. ORS 278]
          Length = 308

 Score =  559 bits (1441), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 280/308 (90%), Positives = 292/308 (94%)

Query: 26  MFGDYSISDLGAILAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 85
           MFGDYSI DLGAI AMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT
Sbjct: 1   MFGDYSIGDLGAIFAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 60

Query: 86  WMTSNAVQHVAPWLFPGYFFIAMILAFIASGALGMLVEWAPIRHLYKRPLDTLLATWGLS 145
           WMTSNA Q+  P LFPGYFF+AM LAF+ASG+LGMLVEWA IR LYKRPLDTLLATWGLS
Sbjct: 61  WMTSNAFQNFLPSLFPGYFFVAMALAFVASGSLGMLVEWAMIRRLYKRPLDTLLATWGLS 120

Query: 146 LILQQAYRSIFGAREVGVELPEWMMGSWQATDSIQIPINGMFVMGLTILITIAVAYVLFW 205
           LILQQAYRS+FGAREVGVELPEWMMGSWQATDSIQIPINGMFVM LTILITI VAYVLF 
Sbjct: 121 LILQQAYRSVFGAREVGVELPEWMMGSWQATDSIQIPINGMFVMCLTILITIVVAYVLFL 180

Query: 206 SSWGKQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPTAGQLY 265
           S WG+QVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAG+AGSAFTMIGSTGPTAGQLY
Sbjct: 181 SRWGRQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGVAGSAFTMIGSTGPTAGQLY 240

Query: 266 IVDTFLVVVFGGAASLFGTIASAFSISQTQSTLEFFLSGSMAKVITLLTIVAILMVRPQG 325
           IVDTFLVVVFGGAASL GTIASAF+ISQ QST+EFF+SGSMAKV+TLL IVAILM+RPQG
Sbjct: 241 IVDTFLVVVFGGAASLLGTIASAFTISQAQSTMEFFMSGSMAKVLTLLAIVAILMLRPQG 300

Query: 326 LFALKVRK 333
           LFALKVRK
Sbjct: 301 LFALKVRK 308


>ref|YP_001236829.1| branched chain amino acid ABC transporter permease [Bradyrhizobium
           sp. BTAi1]
 gb|ABQ32923.1| amino acid/amide ABC transporter membrane protein 1, HAAT family
           [Bradyrhizobium sp. BTAi1]
          Length = 308

 Score =  558 bits (1437), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 280/308 (90%), Positives = 291/308 (94%)

Query: 26  MFGDYSISDLGAILAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 85
           MFGDYSI DLGAI AMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT
Sbjct: 1   MFGDYSIGDLGAIFAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 60

Query: 86  WMTSNAVQHVAPWLFPGYFFIAMILAFIASGALGMLVEWAPIRHLYKRPLDTLLATWGLS 145
           WMTSNA Q   P LFPGYFF+AM LAFIASG+LGMLVEWA IR LYKRPLDTLLATWGLS
Sbjct: 61  WMTSNAFQSFLPALFPGYFFVAMALAFIASGSLGMLVEWAMIRRLYKRPLDTLLATWGLS 120

Query: 146 LILQQAYRSIFGAREVGVELPEWMMGSWQATDSIQIPINGMFVMGLTILITIAVAYVLFW 205
           LILQQAYRS+FGAREVGVELPEWMMGSWQATD+IQIPINGMFVM LTILITI VAYVLF 
Sbjct: 121 LILQQAYRSVFGAREVGVELPEWMMGSWQATDAIQIPINGMFVMCLTILITIVVAYVLFL 180

Query: 206 SSWGKQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPTAGQLY 265
           S WG+QVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAG+AGSAFTMIGSTGPTAGQLY
Sbjct: 181 SRWGRQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGVAGSAFTMIGSTGPTAGQLY 240

Query: 266 IVDTFLVVVFGGAASLFGTIASAFSISQTQSTLEFFLSGSMAKVITLLTIVAILMVRPQG 325
           IVDTFLVVVFGGAASL GTIASAF+ISQ QST+EFF+SGSMAKV+TLL IVAILM+RPQG
Sbjct: 241 IVDTFLVVVFGGAASLLGTIASAFTISQAQSTMEFFMSGSMAKVLTLLAIVAILMMRPQG 300

Query: 326 LFALKVRK 333
           LFALKVRK
Sbjct: 301 LFALKVRK 308


>ref|NP_946602.1| putative branched-chain amino acid transport system permease
           [Rhodopseudomonas palustris CGA009]
 ref|YP_001990459.1| urea ABC transporter permease [Rhodopseudomonas palustris TIE-1]
 emb|CAE26694.1| putative branched-chain amino acid transport system permease
           protein [Rhodopseudomonas palustris CGA009]
 gb|ACE99983.1| urea ABC transporter, permease protein UrtB [Rhodopseudomonas
           palustris TIE-1]
          Length = 308

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 278/308 (90%), Positives = 290/308 (94%)

Query: 26  MFGDYSISDLGAILAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 85
           MFG+YSI DLGAI AMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT
Sbjct: 1   MFGEYSIGDLGAIFAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 60

Query: 86  WMTSNAVQHVAPWLFPGYFFIAMILAFIASGALGMLVEWAPIRHLYKRPLDTLLATWGLS 145
           WMTSN  Q   P LF GYFFIAMILAFIASGALGMLVEW  IRHLYKRPLDTLLATWGLS
Sbjct: 61  WMTSNFFQSYLPSLFAGYFFIAMILAFIASGALGMLVEWGLIRHLYKRPLDTLLATWGLS 120

Query: 146 LILQQAYRSIFGAREVGVELPEWMMGSWQATDSIQIPINGMFVMGLTILITIAVAYVLFW 205
           LILQQAYRSIFGAREVGVELP+WM+GS Q TD+I+IPINGMFVM LT+LIT AV+YVLFW
Sbjct: 121 LILQQAYRSIFGAREVGVELPQWMLGSKQVTDTIEIPINGMFVMALTVLITAAVSYVLFW 180

Query: 206 SSWGKQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPTAGQLY 265
           S WG+QVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPT+GQLY
Sbjct: 181 SRWGRQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPTSGQLY 240

Query: 266 IVDTFLVVVFGGAASLFGTIASAFSISQTQSTLEFFLSGSMAKVITLLTIVAILMVRPQG 325
           IVDTFLVVVFGGAASLFGTIASAFSISQ QST+EFF+SGSMAKV+TLL IVAILMVRPQG
Sbjct: 241 IVDTFLVVVFGGAASLFGTIASAFSISQAQSTMEFFMSGSMAKVLTLLAIVAILMVRPQG 300

Query: 326 LFALKVRK 333
           LFALKVRK
Sbjct: 301 LFALKVRK 308


>ref|YP_484874.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
 gb|ABD05963.1| inner-membrane translocator [Rhodopseudomonas palustris HaA2]
          Length = 308

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 274/308 (88%), Positives = 290/308 (94%)

Query: 26  MFGDYSISDLGAILAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 85
           MFGDYSI DLGAI AMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT
Sbjct: 1   MFGDYSIGDLGAIFAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 60

Query: 86  WMTSNAVQHVAPWLFPGYFFIAMILAFIASGALGMLVEWAPIRHLYKRPLDTLLATWGLS 145
           WMTS+A Q   P LFPGYFF+AMILAFIA+GALGMLVEW  IRHLYKRPLDTLLATWGLS
Sbjct: 61  WMTSSAFQAYLPSLFPGYFFVAMILAFIAAGALGMLVEWGLIRHLYKRPLDTLLATWGLS 120

Query: 146 LILQQAYRSIFGAREVGVELPEWMMGSWQATDSIQIPINGMFVMGLTILITIAVAYVLFW 205
           LILQQAYRSIFGAREVGVELP+WM+GS Q TD+I++PING+FVM LT LIT AVAYV++ 
Sbjct: 121 LILQQAYRSIFGAREVGVELPQWMLGSKQITDTIEVPINGIFVMCLTFLITAAVAYVMYK 180

Query: 206 SSWGKQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPTAGQLY 265
           S WG+QVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPT+GQLY
Sbjct: 181 SRWGRQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPTSGQLY 240

Query: 266 IVDTFLVVVFGGAASLFGTIASAFSISQTQSTLEFFLSGSMAKVITLLTIVAILMVRPQG 325
           IVDTFLVVVFGGAASLFGTIASAFSISQ QST+EFF+SGSMAKV+TLL IVAILMVRPQG
Sbjct: 241 IVDTFLVVVFGGAASLFGTIASAFSISQAQSTMEFFMSGSMAKVLTLLAIVAILMVRPQG 300

Query: 326 LFALKVRK 333
           LFALKVRK
Sbjct: 301 LFALKVRK 308


>ref|YP_570985.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
 gb|ABE41084.1| inner-membrane translocator [Rhodopseudomonas palustris BisB5]
          Length = 308

 Score =  542 bits (1396), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 271/308 (87%), Positives = 289/308 (93%)

Query: 26  MFGDYSISDLGAILAMQGFAGLILFSVYVLMALGLAIIFGQMGVINMAHGEFMILGAYVT 85
           MFGDYSI DLGAI AMQGFAGLILFSVY+LMALGLAIIFGQMGVINMAHGEFMILGAYVT
Sbjct: 1   MFGDYSIGDLGAIFAMQGFAGLILFSVYLLMALGLAIIFGQMGVINMAHGEFMILGAYVT 60

Query: 86  WMTSNAVQHVAPWLFPGYFFIAMILAFIASGALGMLVEWAPIRHLYKRPLDTLLATWGLS 145
           WMTSNA Q   P LFPGYFF+AMILAFIASGALGMLVEW  IRHLY+RPLDTLLATWGLS
Sbjct: 61  WMTSNAFQAYLPSLFPGYFFVAMILAFIASGALGMLVEWGLIRHLYRRPLDTLLATWGLS 120

Query: 146 LILQQAYRSIFGAREVGVELPEWMMGSWQATDSIQIPINGMFVMGLTILITIAVAYVLFW 205
           LILQQAYRSIFGAREVGVELP+WM+GS Q TD+I++PING+FVM LT+LIT  VAYV++ 
Sbjct: 121 LILQQAYRSIFGAREVGVELPQWMLGSKQITDTIEVPINGIFVMCLTVLITATVAYVMYK 180

Query: 206 SSWGKQVRAVVQNRVMAGAVGINTEKVDRYTFGLGCGIAGIAGSAFTMIGSTGPTAGQLY 265
           S WG+QVRAVVQNRVMAGAVGINTEKVDR TFGLGCGIAGIAGSAFTMIGSTGPT+GQLY
Sbjct: 181 SRWGRQVRAVVQNRVMAGAVGINTEKVDRTTFGLGCGIAGIAGSAFTMIGSTGPTSGQLY 240

Query: 266 IVDTFLVVVFGGAASLFGTIASAFSISQTQSTLEFFLSGSMAKVITLLTIVAILMVRPQG 325
           IVDTFLVVVFGGAASLFGTIASAFSISQ QST+EFF+SGSMAKV+TLL IVAILM+RPQG
Sbjct: 241 IVDTFLVVVFGGAASLFGTIASAFSISQAQSTMEFFMSGSMAKVLTLLAIVAILMMRPQG 300

Query: 326 LFALKVRK 333
           LFALKVRK
Sbjct: 301 LFALKVRK 308