BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0076.p (357 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004110484.1| urea ABC transporter urea-binding protein [R... 723 0.0 ref|NP_946601.1| amide-urea binding protein [Rhodopseudomonas pa... 720 0.0 ref|YP_001208703.1| branched chain amino-acid ABC transporter su... 719 0.0 ref|YP_484873.1| amide-urea binding protein [Rhodopseudomonas pa... 717 0.0 ref|YP_001236828.1| branched chain amino-acid ABC transporter su... 716 0.0 >ref|YP_004110484.1| urea ABC transporter urea-binding protein [Rhodopseudomonas palustris DX-1] gb|ADU45751.1| urea ABC transporter, urea binding protein [Rhodopseudomonas palustris DX-1] Length = 420 Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust. Identities = 346/357 (96%), Positives = 352/357 (98%) Query: 1 VTGTMAISETGSVEAEKLAIEQINAAGGVLGRKIKFIQEDGASDWPTFAEKAKKLLVNDK 60 VTGTMAISETGSV+AEKLAIEQINA+GGVLGRKIK+IQEDGASDWPTFAEKAKKLLVNDK Sbjct: 64 VTGTMAISETGSVQAEKLAIEQINASGGVLGRKIKYIQEDGASDWPTFAEKAKKLLVNDK 123 Query: 61 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 120 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV Sbjct: 124 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 183 Query: 121 NKTKGAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGSTQFNSVINKIK 180 NKTK AKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLG TQFNSVINKIK Sbjct: 184 NKTKNAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGHTQFNSVINKIK 243 Query: 181 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM 240 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM Sbjct: 244 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM 303 Query: 241 KYFQSLDNPNNKAFVPAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAQSFDIDKIAAA 300 KYFQSLDNPNNK FV AFKKMWG+KTVIGDVTQAAYLGPWLWKLTVEKA SFD+DK+AAA Sbjct: 304 KYFQSLDNPNNKEFVAAFKKMWGDKTVIGDVTQAAYLGPWLWKLTVEKAGSFDVDKVAAA 363 Query: 301 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 357 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ Sbjct: 364 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 420 >ref|NP_946601.1| amide-urea binding protein [Rhodopseudomonas palustris CGA009] ref|YP_001990458.1| urea ABC transporter substrate-binding protein [Rhodopseudomonas palustris TIE-1] emb|CAE26693.1| amide-urea binding protein [Rhodopseudomonas palustris CGA009] gb|ACE99982.1| urea ABC transporter, urea binding protein [Rhodopseudomonas palustris TIE-1] Length = 420 Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/357 (97%), Positives = 350/357 (98%) Query: 1 VTGTMAISETGSVEAEKLAIEQINAAGGVLGRKIKFIQEDGASDWPTFAEKAKKLLVNDK 60 VTGTMAISETGSV+AEKLAIEQINAAGGVLGRKIK+IQEDGASDWPTFAEKAKKLLVNDK Sbjct: 64 VTGTMAISETGSVQAEKLAIEQINAAGGVLGRKIKYIQEDGASDWPTFAEKAKKLLVNDK 123 Query: 61 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 120 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV Sbjct: 124 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 183 Query: 121 NKTKGAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGSTQFNSVINKIK 180 NKTKGAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLG TQFNSVINKIK Sbjct: 184 NKTKGAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGHTQFNSVINKIK 243 Query: 181 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM 240 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM Sbjct: 244 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM 303 Query: 241 KYFQSLDNPNNKAFVPAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAQSFDIDKIAAA 300 KYFQSLDNPNNK FV F KMWG KTVIGDVTQAAYLGPWLWKLTVEKA SFDIDK+AAA Sbjct: 304 KYFQSLDNPNNKKFVEEFHKMWGPKTVIGDVTQAAYLGPWLWKLTVEKAGSFDIDKVAAA 363 Query: 301 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 357 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ Sbjct: 364 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 420 >ref|YP_001208703.1| branched chain amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL80488.1| Putative branched-chain amino acid ABC transporter, substrate-binding protein [Bradyrhizobium sp. ORS 278] Length = 391 Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/357 (97%), Positives = 352/357 (98%) Query: 1 VTGTMAISETGSVEAEKLAIEQINAAGGVLGRKIKFIQEDGASDWPTFAEKAKKLLVNDK 60 VTGTMAISETGSV+AEKLAIEQINAAGGVLGRKIK+IQEDGASDWPTFAEKAKKLLVNDK Sbjct: 35 VTGTMAISETGSVQAEKLAIEQINAAGGVLGRKIKYIQEDGASDWPTFAEKAKKLLVNDK 94 Query: 61 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 120 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV Sbjct: 95 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 154 Query: 121 NKTKGAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGSTQFNSVINKIK 180 NKTKGAK+FYLLGSDYIWPRTSNKIARKHIE HLQGCKVVGEEYFPLG TQFNSVINKIK Sbjct: 155 NKTKGAKTFYLLGSDYIWPRTSNKIARKHIEGHLQGCKVVGEEYFPLGHTQFNSVINKIK 214 Query: 181 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM 240 LTKPDVIYAIIVGGSNVAFYKQLKAAGID+SKQTLLTISVTEDEIDGIGGENIAGAYACM Sbjct: 215 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDMSKQTLLTISVTEDEIDGIGGENIAGAYACM 274 Query: 241 KYFQSLDNPNNKAFVPAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAQSFDIDKIAAA 300 KYFQSLDN NNKAFV AFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKA SFDIDKIAAA Sbjct: 275 KYFQSLDNANNKAFVSAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAGSFDIDKIAAA 334 Query: 301 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 357 SPG+EFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ Sbjct: 335 SPGIEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 391 >ref|YP_484873.1| amide-urea binding protein [Rhodopseudomonas palustris HaA2] gb|ABD05962.1| amide-urea binding protein [Rhodopseudomonas palustris HaA2] Length = 392 Score = 717 bits (1852), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/357 (96%), Positives = 351/357 (98%) Query: 1 VTGTMAISETGSVEAEKLAIEQINAAGGVLGRKIKFIQEDGASDWPTFAEKAKKLLVNDK 60 VTGTMAISETGSV+AEKLAIEQINAAGGVLGRKIK+IQEDGASDWP FAEKAKKLLVNDK Sbjct: 36 VTGTMAISETGSVQAEKLAIEQINAAGGVLGRKIKYIQEDGASDWPNFAEKAKKLLVNDK 95 Query: 61 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 120 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV Sbjct: 96 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 155 Query: 121 NKTKGAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGSTQFNSVINKIK 180 NKTK AKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLG TQFNSVINKIK Sbjct: 156 NKTKNAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGHTQFNSVINKIK 215 Query: 181 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM 240 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGA+ACM Sbjct: 216 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAFACM 275 Query: 241 KYFQSLDNPNNKAFVPAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAQSFDIDKIAAA 300 KYFQSLDNPNNKAFV AFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKA SFDIDK+AAA Sbjct: 276 KYFQSLDNPNNKAFVAAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAGSFDIDKVAAA 335 Query: 301 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 357 SPGVEFKGAPEGYVR+HENHHLWSKTRVG+AK DGQYEL+YETADLVEPDPFPKGYQ Sbjct: 336 SPGVEFKGAPEGYVRVHENHHLWSKTRVGKAKLDGQYELVYETADLVEPDPFPKGYQ 392 >ref|YP_001236828.1| branched chain amino-acid ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ32922.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 391 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/357 (96%), Positives = 351/357 (98%) Query: 1 VTGTMAISETGSVEAEKLAIEQINAAGGVLGRKIKFIQEDGASDWPTFAEKAKKLLVNDK 60 VTGTMAISETGSV+AEKLAIEQINAAGGVLGRKIK+IQEDGASDWPTFAEKAKKLLVNDK Sbjct: 35 VTGTMAISETGSVQAEKLAIEQINAAGGVLGRKIKYIQEDGASDWPTFAEKAKKLLVNDK 94 Query: 61 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 120 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV Sbjct: 95 CAAVMGCWTSASRKAVLPVFEQYNGMLYYPTFYEGLEQSKNVIYTGQEATQQIIAGLDWV 154 Query: 121 NKTKGAKSFYLLGSDYIWPRTSNKIARKHIENHLQGCKVVGEEYFPLGSTQFNSVINKIK 180 NKTKGAK+FYLLGSDYIWPRTSNKIARKHIE HLQG KVVGEEYFPLG TQFNSVINKIK Sbjct: 155 NKTKGAKTFYLLGSDYIWPRTSNKIARKHIEGHLQGAKVVGEEYFPLGHTQFNSVINKIK 214 Query: 181 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDLSKQTLLTISVTEDEIDGIGGENIAGAYACM 240 LTKPDVIYAIIVGGSNVAFYKQLKAAGID+SKQTLLTISVTEDEIDGIGGENIAGAYACM Sbjct: 215 LTKPDVIYAIIVGGSNVAFYKQLKAAGIDMSKQTLLTISVTEDEIDGIGGENIAGAYACM 274 Query: 241 KYFQSLDNPNNKAFVPAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAQSFDIDKIAAA 300 KYFQSLDN NNKAFV AFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKA SFD+DK+AAA Sbjct: 275 KYFQSLDNANNKAFVSAFKKMWGEKTVIGDVTQAAYLGPWLWKLTVEKAGSFDVDKVAAA 334 Query: 301 SPGVEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 357 SPG+EFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ Sbjct: 335 SPGIEFKGAPEGYVRIHENHHLWSKTRVGRAKADGQYELIYETADLVEPDPFPKGYQ 391