BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0064.p         (122 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769910.1| precorrin methylase [Bradyrhizobium japonicum U...   130   1e-28
ref|ZP_08643868.1| precorrin methylase [Acetobacter tropicalis N...   108   3e-22
ref|ZP_02152309.1| precorrin methylase [Oceanibulbus indolifex H...    83   2e-14
ref|ZP_08698865.1| hypothetical protein AaceN1_13779 [Acetobacte...    82   4e-14
ref|ZP_08663961.1| precorrin methylase [Paracoccus sp. TRP]            78   5e-13

>ref|NP_769910.1| precorrin methylase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48535.1| precorrin methylase [Bradyrhizobium japonicum USDA 110]
          Length = 127

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 96/121 (79%)

Query: 1   MKVAGLGFRRDAGVASLRDALDAAGGSDGLAAIATVSDKADAAALRDLARELGLPVRSIP 60
           MKVAGLGFR+D  +ASLR+AL AAGG++ LAA+ATVSDKAD  AL+ LARE G+P+R++ 
Sbjct: 6   MKVAGLGFRQDVTLASLREALLAAGGAEDLAAVATVSDKADVEALQQLARECGVPIRAVS 65

Query: 61  AGILAEIKTATQSGFIKARFGTGSVAEAAAIAAAGRGARLISARAASQDRMAIAAIAEGD 120
             +LA I T TQS  I  +FGTGSVAEAAA+AAAG  ARLI+ R  SQDR A AAIAEGD
Sbjct: 66  PEVLAGIDTPTQSRLIAEKFGTGSVAEAAALAAAGPRARLIATRVISQDRTATAAIAEGD 125

Query: 121 G 121
           G
Sbjct: 126 G 126


>ref|ZP_08643868.1| precorrin methylase [Acetobacter tropicalis NBRC 101654]
 dbj|GAA07172.1| precorrin methylase [Acetobacter tropicalis NBRC 101654]
          Length = 120

 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/118 (54%), Positives = 77/118 (65%)

Query: 1   MKVAGLGFRRDAGVASLRDALDAAGGSDGLAAIATVSDKADAAALRDLARELGLPVRSIP 60
           MKVAG GFR  A + SLR+ALDAA G + + A+AT++ KA       LA ELG+PVR+I 
Sbjct: 1   MKVAGFGFREAATLTSLRNALDAARGHESVGAVATLAHKACTPVFIALAEELGVPVRAIA 60

Query: 61  AGILAEIKTATQSGFIKARFGTGSVAEAAAIAAAGRGARLISARAASQDRMAIAAIAE 118
              LA I T T+S  I  RFGTG +AEA A+A AG GARL+  R  S D M  AAIAE
Sbjct: 61  METLAGISTPTRSERIMLRFGTGCIAEATALAGAGFGARLMVRRTVSTDGMTTAAIAE 118


>ref|ZP_02152309.1| precorrin methylase [Oceanibulbus indolifex HEL-45]
 gb|EDQ06176.1| precorrin methylase [Oceanibulbus indolifex HEL-45]
          Length = 125

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/124 (54%), Positives = 82/124 (66%), Gaps = 3/124 (2%)

Query: 1   MKVAGLGFRRDAGVASLRDALDAAGGSDGLAAIATVSD--KADAAALRDLARELGLPVRS 58
           M++AG+GFR  A VASLRDAL A    DGL   A V++  KA A   RD A+ELG+P   
Sbjct: 1   MRMAGIGFRGAASVASLRDAL-ARANPDGLKIDALVTEAAKARATVFRDFAQELGVPGLG 59

Query: 59  IPAGILAEIKTATQSGFIKARFGTGSVAEAAAIAAAGRGARLISARAASQDRMAIAAIAE 118
           I    LA + T TQS  I+ RFGTGS++EAAA+AAAG GA L++ R  S D MA AAIAE
Sbjct: 60  ITTEDLARMITPTQSARIEDRFGTGSLSEAAALAAAGPGAVLVAERVVSGDAMATAAIAE 119

Query: 119 GDGE 122
             G+
Sbjct: 120 TKGK 123


>ref|ZP_08698865.1| hypothetical protein AaceN1_13779 [Acetobacter aceti NBRC 14818]
          Length = 122

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/118 (57%), Positives = 89/118 (75%)

Query: 1   MKVAGLGFRRDAGVASLRDALDAAGGSDGLAAIATVSDKADAAALRDLARELGLPVRSIP 60
           M+VAG GFR+ A +ASLRDAL AAGG+ G+ A+ATV+ KA + AL  LA+E+ LP+ ++ 
Sbjct: 1   MRVAGFGFRQAASLASLRDALAAAGGAKGIDALATVAQKAASPALLALAKEMKLPIHALN 60

Query: 61  AGILAEIKTATQSGFIKARFGTGSVAEAAAIAAAGRGARLISARAASQDRMAIAAIAE 118
           A  LA I T T+S    AR+GTGSVAEA+A+AAAG GA L++ RA S D +A+AAIAE
Sbjct: 61  ADTLAHISTPTRSDRAMARYGTGSVAEASALAAAGTGAYLLTPRATSADGLAMAAIAE 118


>ref|ZP_08663961.1| precorrin methylase [Paracoccus sp. TRP]
          Length = 120

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 66/120 (55%), Positives = 84/120 (70%), Gaps = 6/120 (5%)

Query: 1   MKVAGLGFRRDAGVASLRDALDAAGGSDGLAAIATVSDKADAAALRDLARELGLPVRSIP 60
           M+VAG+GFR+ A +A+LR+AL  AG ++   A+AT   KA AA +R LA E GLP+ ++ 
Sbjct: 5   MRVAGIGFRKAATLAALREALTRAGPAE---ALATTPAKAQAAPIRALAAETGLPLIAVE 61

Query: 61  AGILAEIKTATQSGFIKARFGTGSVAEAAAIAAAGRGARLISARAASQDRMAIAAIAEGD 120
              +A I T TQS  I AR GTGS+AEAAA+AA G GAR+I+ R  SQD  A AAIAEGD
Sbjct: 62  ---VAGIATPTQSPRILARHGTGSLAEAAALAALGPGARIIAPRVISQDGTATAAIAEGD 118