BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0052.p (321 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769898.1| cobalamin biosynthetic protein [Bradyrhizobium ... 477 e-133 ref|ZP_08413576.1| aminotransferase, class I and II [Rhodobacter... 385 e-105 ref|YP_002526512.1| Aminotransferase [Rhodobacter sphaeroides KD... 380 e-103 ref|YP_353867.1| aminotransferase [Rhodobacter sphaeroides 2.4.1... 380 e-103 ref|YP_004277006.1| putative threonine-phosphate decarboxylase/c... 376 e-102 >ref|NP_769898.1| cobalamin biosynthetic protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48523.1| cobalamin biosynthetic protein [Bradyrhizobium japonicum USDA 110] Length = 326 Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust. Identities = 245/319 (76%), Positives = 270/319 (84%) Query: 1 MREHGGNLDVAQQRFGGAADDWIDLSTGINRVPYPLVDVEPRHWSALPSRSDLESLHAAA 60 MREHGGNLD+AQQRFGG A+DWIDLSTGINR+PYP +V R WSALPSR+++++LH AA Sbjct: 6 MREHGGNLDLAQQRFGGRAEDWIDLSTGINRLPYPAGEVSMRAWSALPSRAEIDALHQAA 65 Query: 61 RQPYGTDAPMVAMGGAQAAIQLLPHLALKGRARILAPTYNEYAAVLSAAGWDVAEMSDLA 120 + Y T A +VAMGGAQAAIQLLP L +GRARILAPTYNEYA VLSAAGWDV E+ DL Sbjct: 66 QHAYRTSAALVAMGGAQAAIQLLPQLGPRGRARILAPTYNEYAGVLSAAGWDVLEVGDLD 125 Query: 121 ALAGADIAVVVNPNNPDGRRHDRQELLALLPRVGRLVIDESFVDAVPDLSLAPEAGRAGL 180 AL GAD+A+VVNPNNPDGR H Q+LLALLPRVGRLVIDESFVDAVP LSLAPEA GL Sbjct: 126 ALVGADLAIVVNPNNPDGRCHTPQDLLALLPRVGRLVIDESFVDAVPQLSLAPEADHPGL 185 Query: 181 LILRSFGKFYGLAGLRLGFAIGSEADIAALAAMAGPWPVSGAAIAIGRRALLDRDWAKAT 240 LILRSFGKFYGLAGLRLGFA+GS ADIA +AAM+GPWPVSGAAIAIG RAL D WA +T Sbjct: 186 LILRSFGKFYGLAGLRLGFALGSAADIARIAAMSGPWPVSGAAIAIGCRALRDDAWAGST 245 Query: 241 AARLADDCVRLDAAARSQGWTLLGGTLLFRLYETGDALAAQAKLARAQIWSRVFQQKPGW 300 +ARL DC RLD AR+QGW +GGT LFRLYET DALAAQ KLAR QIWSRVF QKP W Sbjct: 246 SARLVRDCARLDDMARAQGWRFVGGTPLFRLYETPDALAAQEKLARGQIWSRVFVQKPTW 305 Query: 301 LRLGLPGSEAEWSRLSAVL 319 LRLGLPGSE EW+RL+ VL Sbjct: 306 LRLGLPGSEPEWTRLAEVL 324 >ref|ZP_08413576.1| aminotransferase, class I and II [Rhodobacter sphaeroides WS8N] gb|EGJ22281.1| aminotransferase, class I and II [Rhodobacter sphaeroides WS8N] Length = 324 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 206/319 (64%), Positives = 240/319 (75%) Query: 1 MREHGGNLDVAQQRFGGAADDWIDLSTGINRVPYPLVDVEPRHWSALPSRSDLESLHAAA 60 MR+HGGNLD A FGGA +DW+DLSTGINRVPYP+ + R +ALP + L AAA Sbjct: 1 MRDHGGNLDSAAALFGGAVEDWLDLSTGINRVPYPMPPLPARALTALPDAAAETRLLAAA 60 Query: 61 RQPYGTDAPMVAMGGAQAAIQLLPHLALKGRARILAPTYNEYAAVLSAAGWDVAEMSDLA 120 R + T+APM+A+ GAQAAIQL+P L GRAR+L PTYNE+AA L AAGW V E+S+LA Sbjct: 61 RLAFRTEAPMLAVAGAQAAIQLVPRLTPPGRARVLGPTYNEHAASLRAAGWQVEEVSELA 120 Query: 121 ALAGADIAVVVNPNNPDGRRHDRQELLALLPRVGRLVIDESFVDAVPDLSLAPEAGRAGL 180 AL GAD+AV+VNPNNPDGRRH + L A LPRVGRL++DESF D +PDLSL PEAG GL Sbjct: 121 ALEGADLAVLVNPNNPDGRRHPPEALRAHLPRVGRLLVDESFGDPLPDLSLTPEAGVPGL 180 Query: 181 LILRSFGKFYGLAGLRLGFAIGSEADIAALAAMAGPWPVSGAAIAIGRRALLDRDWAKAT 240 L+LRSFGKFYGLAGLRLGF +G+ DIAALA MAGPW VSG AIA G AL DRDWA+ T Sbjct: 181 LVLRSFGKFYGLAGLRLGFVLGNAEDIAALARMAGPWAVSGPAIAAGTVALADRDWAQTT 240 Query: 241 AARLADDCVRLDAAARSQGWTLLGGTLLFRLYETGDALAAQAKLARAQIWSRVFQQKPGW 300 ARL + RLDA A +GW L GG LFRLY+T DA AAQ +LARA+IWSR+F Sbjct: 241 TARLEAEGPRLDALAARRGWRLAGGAHLFRLYDTPDARAAQDQLARARIWSRIFPWSDRL 300 Query: 301 LRLGLPGSEAEWSRLSAVL 319 +RLGLPG E EW+RL A Sbjct: 301 IRLGLPGGETEWARLDAAF 319 >ref|YP_002526512.1| Aminotransferase [Rhodobacter sphaeroides KD131] gb|ACM02011.1| Aminotransferase [Rhodobacter sphaeroides KD131] Length = 324 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 208/319 (65%), Positives = 241/319 (75%) Query: 1 MREHGGNLDVAQQRFGGAADDWIDLSTGINRVPYPLVDVEPRHWSALPSRSDLESLHAAA 60 MR+HGGNLD A FGGA +DW+DLSTGINRVPYP+ + R +ALP + L AAA Sbjct: 1 MRDHGGNLDSAAALFGGAVEDWLDLSTGINRVPYPMPRLPARALTALPDAAAEARLLAAA 60 Query: 61 RQPYGTDAPMVAMGGAQAAIQLLPHLALKGRARILAPTYNEYAAVLSAAGWDVAEMSDLA 120 R + T+APM+A+ GAQAAIQL+P L GRAR+L PTYNE+AA L AAGW V E+ +LA Sbjct: 61 RVAFRTEAPMLAVAGAQAAIQLVPRLTPPGRARVLGPTYNEHAASLRAAGWQVEEVGELA 120 Query: 121 ALAGADIAVVVNPNNPDGRRHDRQELLALLPRVGRLVIDESFVDAVPDLSLAPEAGRAGL 180 AL GAD+AV+VNPNNPDGRRH + L ALLPRVGRL++DESF D +PDLSLAPEAG GL Sbjct: 121 ALEGADLAVLVNPNNPDGRRHPPKALRALLPRVGRLLVDESFGDPLPDLSLAPEAGVPGL 180 Query: 181 LILRSFGKFYGLAGLRLGFAIGSEADIAALAAMAGPWPVSGAAIAIGRRALLDRDWAKAT 240 L+LRSFGKFYGLAGLRLGF +G+ D+AALA MAGPW VSG AIA G AL DRDWA+AT Sbjct: 181 LVLRSFGKFYGLAGLRLGFVLGNAEDVAALARMAGPWAVSGPAIAAGEVALADRDWAEAT 240 Query: 241 AARLADDCVRLDAAARSQGWTLLGGTLLFRLYETGDALAAQAKLARAQIWSRVFQQKPGW 300 ARL + RLDA A GW L GG LFRLY+T DA AAQ LARA+IWSR+F Sbjct: 241 TARLEAEGPRLDALADRMGWRLAGGAHLFRLYDTPDARAAQDHLARARIWSRIFPWSDRL 300 Query: 301 LRLGLPGSEAEWSRLSAVL 319 +RLGLPG EAEW+RL A Sbjct: 301 IRLGLPGGEAEWARLDAAF 319 >ref|YP_353867.1| aminotransferase [Rhodobacter sphaeroides 2.4.1] gb|ABA79966.1| aminotransferase [Rhodobacter sphaeroides 2.4.1] Length = 324 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 208/319 (65%), Positives = 240/319 (75%) Query: 1 MREHGGNLDVAQQRFGGAADDWIDLSTGINRVPYPLVDVEPRHWSALPSRSDLESLHAAA 60 MR+HGGNLD A FGGA +DW+DLSTGINRVPYP+ + R +ALP + L AAA Sbjct: 1 MRDHGGNLDSAAALFGGAVEDWLDLSTGINRVPYPMPRLPARALTALPDAAAEARLLAAA 60 Query: 61 RQPYGTDAPMVAMGGAQAAIQLLPHLALKGRARILAPTYNEYAAVLSAAGWDVAEMSDLA 120 R + T+APM+A+ GAQAAIQL+P L GRAR+L PTYNE+AA L AAGW V E+S+LA Sbjct: 61 RVAFRTEAPMLAVAGAQAAIQLVPRLTPPGRARVLGPTYNEHAASLRAAGWQVEEVSELA 120 Query: 121 ALAGADIAVVVNPNNPDGRRHDRQELLALLPRVGRLVIDESFVDAVPDLSLAPEAGRAGL 180 AL GAD+AV+VNPNNPDGRRH + L ALLPRVGRL++DESF D +PDLSLAPEAG G Sbjct: 121 ALEGADLAVLVNPNNPDGRRHPPETLRALLPRVGRLLVDESFGDPLPDLSLAPEAGVPGH 180 Query: 181 LILRSFGKFYGLAGLRLGFAIGSEADIAALAAMAGPWPVSGAAIAIGRRALLDRDWAKAT 240 L+LRSFGKFYGLAGLRLGF +GS D+AALA MAGPW VSG AIA G AL DRDWA+ T Sbjct: 181 LVLRSFGKFYGLAGLRLGFVLGSAEDVAALARMAGPWAVSGPAIAAGTVALADRDWAETT 240 Query: 241 AARLADDCVRLDAAARSQGWTLLGGTLLFRLYETGDALAAQAKLARAQIWSRVFQQKPGW 300 ARL + RLDA A GW L GG LFRLY+T DA AAQ LARA+IWSR+F Sbjct: 241 TARLEAEGPRLDALAARMGWRLAGGAHLFRLYDTPDARAAQDHLARARIWSRIFPWSDRL 300 Query: 301 LRLGLPGSEAEWSRLSAVL 319 +RLGLPG EAEW+RL A Sbjct: 301 IRLGLPGGEAEWARLDAAF 319 >ref|YP_004277006.1| putative threonine-phosphate decarboxylase/cob(II)yrinic acid a,c-diamide reductase [Acidiphilium multivorum AIU301] dbj|BAJ82864.1| putative threonine-phosphate decarboxylase/cob(II)yrinic acid a,c-diamide reductase [Acidiphilium multivorum AIU301] Length = 529 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 211/319 (66%), Positives = 248/319 (77%) Query: 1 MREHGGNLDVAQQRFGGAADDWIDLSTGINRVPYPLVDVEPRHWSALPSRSDLESLHAAA 60 MR+HGGNLD A FGG A DWIDLSTGINR P+P+ + P W+ALP++ L +L AA Sbjct: 1 MRDHGGNLDEAMAGFGGTAADWIDLSTGINRQPWPVPPLPPEAWTALPTKRALAALIEAA 60 Query: 61 RQPYGTDAPMVAMGGAQAAIQLLPHLALKGRARILAPTYNEYAAVLSAAGWDVAEMSDLA 120 R +GT+APMVA+ GAQAAIQL+PHLA GRAR+LAPTYNE+AA L AAGW V E+S L Sbjct: 61 RGVWGTEAPMVALAGAQAAIQLIPHLAPPGRARVLAPTYNEHAAALRAAGWAVKEVSRLE 120 Query: 121 ALAGADIAVVVNPNNPDGRRHDRQELLALLPRVGRLVIDESFVDAVPDLSLAPEAGRAGL 180 LAGAD+AV+VNPNNPDGRR + + LLALLP+VGRLV+DESF D P LSLA GR GL Sbjct: 121 ELAGADLAVLVNPNNPDGRRIEPEALLALLPQVGRLVVDESFGDPDPALSLAAGCGRPGL 180 Query: 181 LILRSFGKFYGLAGLRLGFAIGSEADIAALAAMAGPWPVSGAAIAIGRRALLDRDWAKAT 240 ++LRSFGKF+GLAG+RLGFAIG ADIAALA AGPW VSG A+ IGRRALLD WA+AT Sbjct: 181 IVLRSFGKFWGLAGVRLGFAIGPAADIAALAERAGPWAVSGPALEIGRRALLDTAWAEAT 240 Query: 241 AARLADDCVRLDAAARSQGWTLLGGTLLFRLYETGDALAAQAKLARAQIWSRVFQQKPGW 300 RLA++ +RLDA GW L+GGT LFRLY T + AAQA+LAR +IWSR+F +P W Sbjct: 241 RQRLAENALRLDALVARAGWELIGGTGLFRLYRTPEGTAAQARLARHRIWSRIFPARPDW 300 Query: 301 LRLGLPGSEAEWSRLSAVL 319 LRLGLPGSE EW R+ A L Sbjct: 301 LRLGLPGSEEEWKRMEAAL 319