BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0047.p (248 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002278705.1| cobalt transporter subunit CbtA [Rhizobium l... 239 4e-61 ref|YP_002984971.1| cobalt transporter, subunit CbtA [Rhizobium ... 231 8e-59 ref|YP_771155.1| hypothetical protein pRL110121 [Rhizobium legum... 224 1e-56 ref|ZP_03503093.1| cobalt transporter, subunit CbtA [Rhizobium e... 222 4e-56 ref|YP_004612337.1| cobalt transporter subunit CbtA [Mesorhizobi... 219 2e-55 >ref|YP_002278705.1| cobalt transporter subunit CbtA [Rhizobium leguminosarum bv. trifolii WSM2304] gb|ACI57965.1| cobalt transporter, subunit CbtA [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 241 Score = 239 bits (609), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 139/246 (56%), Positives = 160/246 (65%), Gaps = 12/246 (4%) Query: 1 MSTFRSIVFSSVIAGFIVGLIVTAVQQFGTVPLILRAEVYEKTAAHKHEAAAPPQAILVH 60 MS FRSIVF++V+AG IVG VTAVQ FGT LI RAEVYEK A A H Sbjct: 1 MSLFRSIVFTAVLAGSIVGTAVTAVQFFGTSQLIARAEVYEKAGETSQAADAEAVVAAGH 60 Query: 61 DHA---DHDHAAEAWEPRDGLERNVYTAGANILTAIGFALLLCGFLAVRSGATGEQISWH 117 DHA DHDH WEP DG+ER +T ANILTAIG+AL L G +++R G+ I W Sbjct: 61 DHAAMADHDHEEGGWEPADGVERTAFTLAANILTAIGYALALTGLISMR----GKAIGWR 116 Query: 118 EGLMWGLAGFAVFTIAPGLGLPPELPGVPTAPLLSRQIWWVTAVLATAAGLGLIVFRRSM 177 EGLMWGLAGFA IAP LGLPPELPG P+APL RQ+WW+ ATA GL LI F R Sbjct: 117 EGLMWGLAGFACVMIAPMLGLPPELPGTPSAPLADRQVWWIATATATACGLALIAFHRKP 176 Query: 178 PAAIAGVVLIMLPHLIG---APELQHVETNVPSSLSHQFVVAVTLTSLVFWSLLGSLTSA 234 A+A +VLI PH+IG APE QH P +L HQF+ A +TSLVFW+LLGSLT Sbjct: 177 WTAVAAIVLIAAPHVIGAPAAPEGQHA--LAPEALEHQFIAAAAMTSLVFWALLGSLTGT 234 Query: 235 AFAYFD 240 F F+ Sbjct: 235 FFRRFE 240 >ref|YP_002984971.1| cobalt transporter, subunit CbtA [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS60009.1| cobalt transporter, subunit CbtA [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 241 Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 129/247 (52%), Positives = 162/247 (65%), Gaps = 14/247 (5%) Query: 1 MSTFRSIVFSSVIAGFIVGLIVTAVQQFGTVPLILRAEVYEKTAAHKHEAAAPPQAI--- 57 MS FRSIVF++ + G IVG V+A Q GT LI +AEVYEK EA P+ + Sbjct: 1 MSLFRSIVFTAALTGVIVGGAVSAAQFAGTSQLIAKAEVYEKAG----EATETPEVVSPM 56 Query: 58 -LVHDH-ADHDHAAEAWEPRDGLERNVYTAGANILTAIGFALLLCGFLAVRSGATGEQIS 115 H H ADHDH WEP DGLER +T AN+LTAIG+AL+LCG +A+R G+ ++ Sbjct: 57 TTPHPHEADHDHNEAGWEPSDGLERMTFTVAANMLTAIGYALVLCGLIAMR----GKPVT 112 Query: 116 WHEGLMWGLAGFAVFTIAPGLGLPPELPGVPTAPLLSRQIWWVTAVLATAAGLGLIVFRR 175 W +GL+WGLAGFA +AP +GLPPELPG P+APL RQ+WW+ LATA G+GLI F+R Sbjct: 113 WRDGLLWGLAGFACVMLAPLIGLPPELPGTPSAPLADRQLWWIGTALATAVGIGLIAFQR 172 Query: 176 SMPAAIAGVVLIMLPHLIGAP-ELQHVETNVPSSLSHQFVVAVTLTSLVFWSLLGSLTSA 234 AA + I PHLIGAP + + P SL HQFV A +TSLVFW+LLGS++ A Sbjct: 173 KPWAAAVAIATIAAPHLIGAPVAPEGMHPLAPESLEHQFVAAAVMTSLVFWALLGSVSGA 232 Query: 235 AFAYFDR 241 F F+R Sbjct: 233 LFRRFER 239 >ref|YP_771155.1| hypothetical protein pRL110121 [Rhizobium leguminosarum bv. viciae 3841] emb|CAK03067.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 241 Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 125/243 (51%), Positives = 160/243 (65%), Gaps = 8/243 (3%) Query: 1 MSTFRSIVFSSVIAGFIVGLIVTAVQQFGTVPLILRAEVYEKT--AAHKHEAAAPPQAIL 58 MS FRSIVF++ + G IVG V+A Q GT LI +AEVYEK A E +P Sbjct: 1 MSLFRSIVFTAALTGVIVGGAVSAAQFAGTSQLIAKAEVYEKAGGATETPEVVSPMTTAH 60 Query: 59 VHDHADHDHAAEAWEPRDGLERNVYTAGANILTAIGFALLLCGFLAVRSGATGEQISWHE 118 V + A HDH WEP DGLER +T AN+LTAIG+AL+LCG +A+R G+ ++W + Sbjct: 61 VPE-AGHDHDEAGWEPSDGLERMAFTVAANMLTAIGYALVLCGLIAMR----GKPVTWRD 115 Query: 119 GLMWGLAGFAVFTIAPGLGLPPELPGVPTAPLLSRQIWWVTAVLATAAGLGLIVFRRSMP 178 GL+WGLAGFA +AP +GLPPELPG P+APL RQ+WW+ LATA G+GLI F+R Sbjct: 116 GLLWGLAGFACVMLAPLIGLPPELPGTPSAPLADRQLWWIGTALATAVGIGLIAFQRKPW 175 Query: 179 AAIAGVVLIMLPHLIGAP-ELQHVETNVPSSLSHQFVVAVTLTSLVFWSLLGSLTSAAFA 237 AA + +I PHLIGAP + + P SL HQFV A +TSLVFW+LLGS++ A + Sbjct: 176 AAAVAIAVIAAPHLIGAPVAPEGMHPLAPESLEHQFVAAAVMTSLVFWALLGSVSGALYR 235 Query: 238 YFD 240 F+ Sbjct: 236 RFE 238 >ref|ZP_03503093.1| cobalt transporter, subunit CbtA [Rhizobium etli Kim 5] Length = 241 Score = 222 bits (566), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 136/246 (55%), Positives = 160/246 (65%), Gaps = 12/246 (4%) Query: 1 MSTFRSIVFSSVIAGFIVGLIVTAVQQFGTVPLILRAEVYEKTAAHKHEAAAPPQAILVH 60 MS FRSIVF++V+AG IVG VTAVQ FGT LI +AEVYEK A A H Sbjct: 1 MSLFRSIVFTAVLAGSIVGAAVTAVQFFGTSQLIAKAEVYEKAGEALPAADAAAAVPPGH 60 Query: 61 DHA---DHDHAAEAWEPRDGLERNVYTAGANILTAIGFALLLCGFLAVRSGATGEQISWH 117 DHA DHDH E WEP DG+ER +T ANILTAIG+AL L G +++R G+ + W Sbjct: 61 DHAAMADHDHEEEGWEPADGVERTAFTLAANILTAIGYALALTGLISMR----GKALGWR 116 Query: 118 EGLMWGLAGFAVFTIAPGLGLPPELPGVPTAPLLSRQIWWVTAVLATAAGLGLIVFRRSM 177 EGLMWGLAGFA IAP LGLPPELPG P+APL RQ+WW+ ATA GL LI F R Sbjct: 117 EGLMWGLAGFACVMIAPMLGLPPELPGTPSAPLADRQVWWIATAAATAGGLALIAFHRKP 176 Query: 178 PAAIAGVVLIMLPHLIG---APELQHVETNVPSSLSHQFVVAVTLTSLVFWSLLGSLTSA 234 A+A +VLI PH+IG APE QH P +L HQF+ +TSL+FW+LLGSLT Sbjct: 177 WTAVAAIVLIAAPHVIGAPAAPEGQHA--LAPEALQHQFIGTAVMTSLIFWALLGSLTGT 234 Query: 235 AFAYFD 240 F F+ Sbjct: 235 FFRRFE 240 >ref|YP_004612337.1| cobalt transporter subunit CbtA [Mesorhizobium opportunistum WSM2075] gb|AEH88243.1| cobalt transporter, subunit CbtA [Mesorhizobium opportunistum WSM2075] Length = 266 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 128/270 (47%), Positives = 167/270 (61%), Gaps = 31/270 (11%) Query: 1 MSTFRSIVFSSVIAGFIVGLIVTAVQQFGTVPLILRAEVYEKTAA-HKHEAAAPPQAILV 59 M+ FR++VF + IAG + G+++ +Q + TVPLIL+AEVYE+ H H+ AAP A Sbjct: 1 MNLFRNVVFIAAIAGLVAGVVLACMQAYATVPLILKAEVYEQAGGGHHHDHAAPTAA--- 57 Query: 60 HDHADHDHAA----------------------EAWEPRDGLERNVYTAGANILTAIGFAL 97 D AA E W P DG ER ++ ANI+T IGFAL Sbjct: 58 -DTNAMSTAAPAGNAMSSAAPAPAEAAAPAEDEGWAPADGFERFGFSVLANIVTGIGFAL 116 Query: 98 LLCGFLAVRSGATGEQISWHEGLMWGLAGFAVFTIAPGLGLPPELPGVPTAPLLSRQIWW 157 +L ++ +G G +W +G+ WGLAGFAVFT+APGLGLPPELP +P A LL RQIWW Sbjct: 117 VLVA-VSEFAGGIG---NWRQGVFWGLAGFAVFTLAPGLGLPPELPAMPAAELLPRQIWW 172 Query: 158 VTAVLATAAGLGLIVFRRSMPAAIAGVVLIMLPHLIGAPELQHVETNVPSSLSHQFVVAV 217 V+ V ATA GLGLI FR+S+P AI GV LI+ PH++GAP+ ET +P L HQFVVAV Sbjct: 173 VSTVAATAIGLGLIAFRKSLPLAILGVALIVAPHIVGAPQPDSFETPIPEGLHHQFVVAV 232 Query: 218 TLTSLVFWSLLGSLTSAAFAYFDRPGSSAR 247 T+T+LVFW +LG++ F +S R Sbjct: 233 TVTNLVFWLVLGAVVGVVRGRFTGTATSLR 262