BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0039.p (523 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769849.1| sugar ABC transporter ATP-binding protein [Brad... 897 0.0 ref|YP_001238231.1| L-arabinose transport ATP-binding protein ar... 870 0.0 ref|YP_001203927.1| L-arabinose transport ATP-binding protein ar... 869 0.0 ref|YP_003692068.1| ABC transporter [Starkeya novella DSM 506] >... 801 0.0 ref|YP_001834123.1| ABC transporter-like protein [Beijerinckia i... 781 0.0 >ref|NP_769849.1| sugar ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48474.1| sugar ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 566 Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/523 (84%), Positives = 479/523 (91%), Gaps = 1/523 (0%) Query: 1 MLEMRGVSKSFAVVQALRDVSFTVEAGQIHALVGENGAGKSTLMKVLSGVYPAGSYDGSI 60 MLEMR VSKSFA VQALRDV+F+V AGQIHALVGENGAGKSTLMKVLSGVYP GSY+G+I Sbjct: 45 MLEMRNVSKSFAGVQALRDVNFSVHAGQIHALVGENGAGKSTLMKVLSGVYPHGSYEGTI 104 Query: 61 VFDGEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHPPSRFGVIDRNAVHRRT 120 +F+GEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHPPS+FGVIDR+ V+RRT Sbjct: 105 IFEGEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHPPSKFGVIDRDEVYRRT 164 Query: 121 AELLAQVGLREPPDTLVTDLGVGKQQLVEIAKALSKRVRLLILDEPTASLNEADSAALLE 180 ELLAQVGLRE PDTL+TDLGVGKQQLVEIAKALSKRVR+LILDEPTASLNEADSAALLE Sbjct: 165 RELLAQVGLRESPDTLITDLGVGKQQLVEIAKALSKRVRMLILDEPTASLNEADSAALLE 224 Query: 181 RLLAFREQGIASILISHKLNEVARVADRITVLRDGRTVDSIDCRTERIEEDRIIRSMVDR 240 RL+AFREQGI SILISHKLNEVA+VAD ITVLRDGRTVDSIDCR E I+EDRIIRSMV+R Sbjct: 225 RLMAFREQGIGSILISHKLNEVAKVADHITVLRDGRTVDSIDCRAEPIQEDRIIRSMVNR 284 Query: 241 DLAHRFPERKAEIGEPVMTVENWSVYHPLHPERQVIKSVDFTLRRGEVVGIAGLMGAGRT 300 DLAHRFPER +IGEPV+ +ENWSVYHP+HPERQVIK+V+F ++RGEVVGIAGLMGAGRT Sbjct: 285 DLAHRFPERSVKIGEPVLAIENWSVYHPIHPERQVIKNVNFGVKRGEVVGIAGLMGAGRT 344 Query: 301 EFAMSLFGRAWGTNVSGKVRLDGREADLSSVPAAIDAGIAYVTEDRKQLGLILAADVRKN 360 EFAMSLFGR+WGTN+SG +RL+GRE L SV AAIDAG+AYVTEDRKQLGLILA DVRKN Sbjct: 345 EFAMSLFGRSWGTNISGSIRLEGREIVLPSVAAAIDAGLAYVTEDRKQLGLILADDVRKN 404 Query: 361 VTVASLRQVSERGVIDDVAELKAASDYRTRMRIRCSDVYQATSDLSGGNQQKVVLSKWLM 420 +T+ASL QV+ VIDD+AELK ASDYR RMRIRCSDVYQ T LSGGNQQKVVLSKWLM Sbjct: 405 ITLASLDQVAPGRVIDDIAELKVASDYRNRMRIRCSDVYQETGQLSGGNQQKVVLSKWLM 464 Query: 421 TDPRVLLLDEPTRGIDVGAKYEIYSIINELAEAGRGVVVISSEMPELLGICDRICVMNDG 480 TDP+VL+LDEPTRGIDVGAKYEIY IINELAEAGRGVVVISSEMPELLGICDRICVMNDG Sbjct: 465 TDPKVLILDEPTRGIDVGAKYEIYCIINELAEAGRGVVVISSEMPELLGICDRICVMNDG 524 Query: 481 AFVGEFARHDATQEKIMRAIMRNVRMSERGADEGAARAGGGAP 523 AFVGEF+ +ATQEKIMRAIMRN R + G E AA GG P Sbjct: 525 AFVGEFSGTEATQEKIMRAIMRNQRSNGNGVPE-AAEMGGLQP 566 >ref|YP_001238231.1| L-arabinose transport ATP-binding protein araG [Bradyrhizobium sp. BTAi1] gb|ABQ34325.1| multiple monosaccharide ABC transporter ATP-binding protein [Bradyrhizobium sp. BTAi1] Length = 516 Score = 870 bits (2248), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/503 (83%), Positives = 465/503 (92%) Query: 1 MLEMRGVSKSFAVVQALRDVSFTVEAGQIHALVGENGAGKSTLMKVLSGVYPAGSYDGSI 60 +LEMR VSKSF VQALRDVSF V G+IHALVGENGAGKSTLMKVLSGVYP G Y+G I Sbjct: 4 ILEMRNVSKSFGNVQALRDVSFAVAPGEIHALVGENGAGKSTLMKVLSGVYPHGRYEGQI 63 Query: 61 VFDGEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHPPSRFGVIDRNAVHRRT 120 +F+GEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSH PSRFGVIDR+ V+RRT Sbjct: 64 IFEGEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHAPSRFGVIDRDEVYRRT 123 Query: 121 AELLAQVGLREPPDTLVTDLGVGKQQLVEIAKALSKRVRLLILDEPTASLNEADSAALLE 180 +LLAQVGL+E PDTL+TDLGVGKQQLVEIAKALSKRV+LLILDEPTASLNEADS ALL+ Sbjct: 124 QQLLAQVGLKESPDTLITDLGVGKQQLVEIAKALSKRVKLLILDEPTASLNEADSQALLD 183 Query: 181 RLLAFREQGIASILISHKLNEVARVADRITVLRDGRTVDSIDCRTERIEEDRIIRSMVDR 240 RL+AFREQGI+SILI+HKLNEVARVADRITVLRDGR+VD IDCR E + EDRII+SMV+R Sbjct: 184 RLVAFREQGISSILITHKLNEVARVADRITVLRDGRSVDGIDCRAEPVLEDRIIKSMVNR 243 Query: 241 DLAHRFPERKAEIGEPVMTVENWSVYHPLHPERQVIKSVDFTLRRGEVVGIAGLMGAGRT 300 D+AHRFPER+ +IGEPV TVENWSV+HP HP+R+VIK+VDF +RRGE+VGIAGLMGAGRT Sbjct: 244 DMAHRFPERQPKIGEPVFTVENWSVFHPQHPDRRVIKNVDFQVRRGEIVGIAGLMGAGRT 303 Query: 301 EFAMSLFGRAWGTNVSGKVRLDGREADLSSVPAAIDAGIAYVTEDRKQLGLILAADVRKN 360 EFAMSLFGR+WG N+SG+ RL+G++ +L+SVPAAIDAG+AYVTEDRKQLGLILA DVRKN Sbjct: 304 EFAMSLFGRSWGVNISGRARLEGKDVNLTSVPAAIDAGLAYVTEDRKQLGLILADDVRKN 363 Query: 361 VTVASLRQVSERGVIDDVAELKAASDYRTRMRIRCSDVYQATSDLSGGNQQKVVLSKWLM 420 +T+ASL QV+ +GVIDD+AELKAAS YR RMRIRCSDVYQ LSGGNQQKVVLSKWLM Sbjct: 364 ITLASLSQVAPKGVIDDIAELKAASGYRGRMRIRCSDVYQEAGQLSGGNQQKVVLSKWLM 423 Query: 421 TDPRVLLLDEPTRGIDVGAKYEIYSIINELAEAGRGVVVISSEMPELLGICDRICVMNDG 480 TDP+VL+LDEPTRGIDVGAKYEIY II ELA+AGRGVVVISSEMPELLGICDRICVMNDG Sbjct: 424 TDPKVLILDEPTRGIDVGAKYEIYCIIQELADAGRGVVVISSEMPELLGICDRICVMNDG 483 Query: 481 AFVGEFARHDATQEKIMRAIMRN 503 AFVGEFA +ATQEKIMRAIMRN Sbjct: 484 AFVGEFAAQEATQEKIMRAIMRN 506 >ref|YP_001203927.1| L-arabinose transport ATP-binding protein araG [Bradyrhizobium sp. ORS 278] emb|CAL75690.1| L-arabinose transport ATP-binding protein araG [Bradyrhizobium sp. ORS 278] Length = 525 Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust. Identities = 419/503 (83%), Positives = 465/503 (92%) Query: 1 MLEMRGVSKSFAVVQALRDVSFTVEAGQIHALVGENGAGKSTLMKVLSGVYPAGSYDGSI 60 +LEMR VSKSF VQALRDVSFTVE G+IHALVGENGAGKSTLMKVLSGVYP G Y+G I Sbjct: 13 ILEMRNVSKSFGNVQALRDVSFTVEPGEIHALVGENGAGKSTLMKVLSGVYPHGRYEGQI 72 Query: 61 VFDGEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHPPSRFGVIDRNAVHRRT 120 +F+GEER+FRDINDSEALGIIIIHQELALIPLMSIAENIFLSH PSRFGVIDR+ V+RRT Sbjct: 73 IFEGEERKFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHAPSRFGVIDRDEVYRRT 132 Query: 121 AELLAQVGLREPPDTLVTDLGVGKQQLVEIAKALSKRVRLLILDEPTASLNEADSAALLE 180 +LLAQVGL+E PDTL+TDLGVGKQQLVEIAKALSKRV+LLILDEPTASLNEADS ALL+ Sbjct: 133 QQLLAQVGLKESPDTLITDLGVGKQQLVEIAKALSKRVKLLILDEPTASLNEADSQALLD 192 Query: 181 RLLAFREQGIASILISHKLNEVARVADRITVLRDGRTVDSIDCRTERIEEDRIIRSMVDR 240 RL+ FREQGI+SILI+HKLNEVARVADRITVLRDGR+VD IDCR E + EDRII+SMV+R Sbjct: 193 RLVKFREQGISSILITHKLNEVARVADRITVLRDGRSVDGIDCRAEPVLEDRIIKSMVNR 252 Query: 241 DLAHRFPERKAEIGEPVMTVENWSVYHPLHPERQVIKSVDFTLRRGEVVGIAGLMGAGRT 300 D+AHRFPER+ +IGEPV TVENW+V+HP HP+R+VIK+VDF +RRGE+VGIAGLMGAGRT Sbjct: 253 DMAHRFPERQPKIGEPVFTVENWTVFHPQHPDRRVIKNVDFEVRRGEIVGIAGLMGAGRT 312 Query: 301 EFAMSLFGRAWGTNVSGKVRLDGREADLSSVPAAIDAGIAYVTEDRKQLGLILAADVRKN 360 EFAMSLFGR+WG N+SG+ RL+G + +L+SVPAAIDAG+AYVTEDRKQLGLILA DVRKN Sbjct: 313 EFAMSLFGRSWGVNISGRARLEGHDVNLTSVPAAIDAGLAYVTEDRKQLGLILADDVRKN 372 Query: 361 VTVASLRQVSERGVIDDVAELKAASDYRTRMRIRCSDVYQATSDLSGGNQQKVVLSKWLM 420 +T+ASL QV+ +GVIDD+AELKAAS YR RMRIRCSDVYQ LSGGNQQKVVLSKWLM Sbjct: 373 ITLASLDQVAPKGVIDDIAELKAASGYRGRMRIRCSDVYQEAGQLSGGNQQKVVLSKWLM 432 Query: 421 TDPRVLLLDEPTRGIDVGAKYEIYSIINELAEAGRGVVVISSEMPELLGICDRICVMNDG 480 TDP+VL+LDEPTRGIDVGAKYEIY II ELA+AGRGVVVISSEMPELLGICDRICVMNDG Sbjct: 433 TDPKVLILDEPTRGIDVGAKYEIYCIIQELADAGRGVVVISSEMPELLGICDRICVMNDG 492 Query: 481 AFVGEFARHDATQEKIMRAIMRN 503 AFVGEFA DATQEKIMRAIMRN Sbjct: 493 AFVGEFAGPDATQEKIMRAIMRN 515 >ref|YP_003692068.1| ABC transporter [Starkeya novella DSM 506] gb|ADH87449.1| ABC transporter related protein [Starkeya novella DSM 506] Length = 510 Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 394/503 (78%), Positives = 441/503 (87%) Query: 1 MLEMRGVSKSFAVVQALRDVSFTVEAGQIHALVGENGAGKSTLMKVLSGVYPAGSYDGSI 60 +LEMRG+SK F V+AL DVSF VE G+IHALVGENGAGKSTLMKVLSGVYP GSYDGSI Sbjct: 4 LLEMRGISKHFTGVKALNDVSFEVEPGEIHALVGENGAGKSTLMKVLSGVYPHGSYDGSI 63 Query: 61 VFDGEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHPPSRFGVIDRNAVHRRT 120 +FDGEERRFRDI DSEALGIIIIHQELALIPLMSIAENIF+++PP+RFGVIDR AVHRRT Sbjct: 64 MFDGEERRFRDIIDSEALGIIIIHQELALIPLMSIAENIFIANPPARFGVIDRGAVHRRT 123 Query: 121 AELLAQVGLREPPDTLVTDLGVGKQQLVEIAKALSKRVRLLILDEPTASLNEADSAALLE 180 ELLA+VGL E PDTLVTD+GVGKQQLVEIAKALSK+VRLLILDEPTASL+E DSAALL+ Sbjct: 124 RELLAKVGLNEEPDTLVTDIGVGKQQLVEIAKALSKKVRLLILDEPTASLSEKDSAALLD 183 Query: 181 RLLAFREQGIASILISHKLNEVARVADRITVLRDGRTVDSIDCRTERIEEDRIIRSMVDR 240 L FR QGI+SILISHKLNEV++VADRITVLRDGRTVD++DC +EEDRIIR MVDR Sbjct: 184 LLREFRAQGISSILISHKLNEVSKVADRITVLRDGRTVDTMDCHEGAVEEDRIIRKMVDR 243 Query: 241 DLAHRFPERKAEIGEPVMTVENWSVYHPLHPERQVIKSVDFTLRRGEVVGIAGLMGAGRT 300 DL HRFP+R+ +IGE + V +WSV+HPLH +RQVIK VDF +RRGE+VGIAGLMGAGRT Sbjct: 244 DLEHRFPKREPKIGETIFRVADWSVHHPLHADRQVIKDVDFEVRRGEIVGIAGLMGAGRT 303 Query: 301 EFAMSLFGRAWGTNVSGKVRLDGREADLSSVPAAIDAGIAYVTEDRKQLGLILAADVRKN 360 EFAMS+FGR+WG + G+ ++GREADLS+V AIDAG+AYVTEDRK+LGL+L DVRKN Sbjct: 304 EFAMSIFGRSWGQKIGGRAEIEGREADLSTVRRAIDAGLAYVTEDRKELGLLLNEDVRKN 363 Query: 361 VTVASLRQVSERGVIDDVAELKAASDYRTRMRIRCSDVYQATSDLSGGNQQKVVLSKWLM 420 VT+A+L VS VIDDV EL ASDYR RMRIR VYQ LSGGNQQKVVLSKWL Sbjct: 364 VTLANLAAVSSAQVIDDVRELAVASDYRGRMRIRSHSVYQEAGKLSGGNQQKVVLSKWLF 423 Query: 421 TDPRVLLLDEPTRGIDVGAKYEIYSIINELAEAGRGVVVISSEMPELLGICDRICVMNDG 480 TDP+VL+LDEPTRGIDVGAKYEIY IINELA+AG+GVVVISSEMPELLGICDRICVMN+G Sbjct: 424 TDPKVLILDEPTRGIDVGAKYEIYCIINELADAGKGVVVISSEMPELLGICDRICVMNEG 483 Query: 481 AFVGEFARHDATQEKIMRAIMRN 503 AFVGEF +ATQEKIMRAIMR Sbjct: 484 AFVGEFPAAEATQEKIMRAIMRK 506 >ref|YP_001834123.1| ABC transporter-like protein [Beijerinckia indica subsp. indica ATCC 9039] gb|ACB96634.1| ABC transporter related [Beijerinckia indica subsp. indica ATCC 9039] Length = 511 Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/502 (74%), Positives = 439/502 (87%) Query: 1 MLEMRGVSKSFAVVQALRDVSFTVEAGQIHALVGENGAGKSTLMKVLSGVYPAGSYDGSI 60 +LEMRG+SKSF V+AL DV+ TV+AG+IHALVGENGAGKSTLMKVLSGVYP GSY+G+I Sbjct: 4 ILEMRGISKSFTGVKALNDVNLTVKAGEIHALVGENGAGKSTLMKVLSGVYPHGSYEGAI 63 Query: 61 VFDGEERRFRDINDSEALGIIIIHQELALIPLMSIAENIFLSHPPSRFGVIDRNAVHRRT 120 +DGEER F DIND+EALGIIIIHQELALIPLMSIAENIF+++PPSRFGVIDR+ V+ R Sbjct: 64 FYDGEERHFHDINDTEALGIIIIHQELALIPLMSIAENIFIANPPSRFGVIDRDTVYTRA 123 Query: 121 AELLAQVGLREPPDTLVTDLGVGKQQLVEIAKALSKRVRLLILDEPTASLNEADSAALLE 180 ELLA+VGL E PDTL+T++GVGKQQLVEIAKALSK+VRLLILDEPTASLNE DS ALL+ Sbjct: 124 KELLAKVGLNEAPDTLITNIGVGKQQLVEIAKALSKKVRLLILDEPTASLNENDSEALLD 183 Query: 181 RLLAFREQGIASILISHKLNEVARVADRITVLRDGRTVDSIDCRTERIEEDRIIRSMVDR 240 L+ FR QGI SILISHKLNEV+RVAD+ITVLRDGRTVD++DC E IEEDRIIR MVDR Sbjct: 184 LLIEFRAQGITSILISHKLNEVSRVADQITVLRDGRTVDTMDCHAEAIEEDRIIRKMVDR 243 Query: 241 DLAHRFPERKAEIGEPVMTVENWSVYHPLHPERQVIKSVDFTLRRGEVVGIAGLMGAGRT 300 DL HR+P+R+ +IG + ++ENWSVYHP HP+RQ+IK+V+F ++RGE+VGIAGLMGAGRT Sbjct: 244 DLEHRYPKREPKIGAAIFSIENWSVYHPQHPDRQLIKNVNFHVKRGEIVGIAGLMGAGRT 303 Query: 301 EFAMSLFGRAWGTNVSGKVRLDGREADLSSVPAAIDAGIAYVTEDRKQLGLILAADVRKN 360 EFAMS+FGR+WG ++G+ L+GRE DLS+V AI+AG+AYVTEDRK+LGL+L+ D+RKN Sbjct: 304 EFAMSVFGRSWGQKITGRAVLNGREVDLSTVSRAINAGLAYVTEDRKELGLLLSDDIRKN 363 Query: 361 VTVASLRQVSERGVIDDVAELKAASDYRTRMRIRCSDVYQATSDLSGGNQQKVVLSKWLM 420 VT+A+L V+ + VIDD+ E K ASDYR+RMRIR S VYQ LSGGNQQKVVLSKWL Sbjct: 364 VTLANLEGVANQRVIDDMKEFKVASDYRSRMRIRSSGVYQEVGKLSGGNQQKVVLSKWLF 423 Query: 421 TDPRVLLLDEPTRGIDVGAKYEIYSIINELAEAGRGVVVISSEMPELLGICDRICVMNDG 480 P +L+LDEPTRGID+GAKYEIY IIN+LA AG+GVVVISSEMPELLGI DRI VMN+G Sbjct: 424 AGPEILILDEPTRGIDIGAKYEIYCIINDLANAGKGVVVISSEMPELLGISDRIYVMNEG 483 Query: 481 AFVGEFARHDATQEKIMRAIMR 502 AFVGEF +ATQEKIMR+IMR Sbjct: 484 AFVGEFPTAEATQEKIMRSIMR 505