BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0019.p (291 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01045340.1| Phosphoribulokinase/uridine kinase [Nitrobact... 546 e-153 ref|YP_319298.1| phosphoribulokinase/uridine kinase [Nitrobacter... 541 e-152 ref|YP_001203771.1| phosphoribulokinase [Bradyrhizobium sp. ORS ... 538 e-151 ref|YP_001242216.1| phosphoribulokinase [Bradyrhizobium sp. BTAi... 538 e-151 ref|YP_571543.1| phosphoribulokinase/uridine kinase [Nitrobacter... 538 e-151 >ref|ZP_01045340.1| Phosphoribulokinase/uridine kinase [Nitrobacter sp. Nb-311A] gb|EAQ36668.1| Phosphoribulokinase/uridine kinase [Nitrobacter sp. Nb-311A] Length = 290 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 259/289 (89%), Positives = 273/289 (94%) Query: 1 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVVAAYIEGDAFHRYDRAEMRSLMAERA 60 MSR+HPIISITGSSGAGTTSVK+TFE IFRRENVVAAYIEGDAFHRY+RAEMR+ MAE + Sbjct: 1 MSRKHPIISITGSSGAGTTSVKRTFEQIFRRENVVAAYIEGDAFHRYNRAEMRTRMAEES 60 Query: 61 ERGNKHFSHFSPETNLFEELEKLFSDYAETGTGTTRHYVHDEEESRLYGAKPGTFTAWEA 120 +RGNKHFSHFSPETNLF ELE +F Y ETGTGTTR+YVHD+ ES L+G PGTFT W+ Sbjct: 61 DRGNKHFSHFSPETNLFTELEAVFRSYGETGTGTTRYYVHDDTESALHGVPPGTFTDWQP 120 Query: 121 LPENSDLLFYEGLHGAVVTDKVNVAQHADLKIGVVPVINLEWIQKLHRDRSHRGYSTEAV 180 LPENSDLLFYEGLHGAVVTDKVNVAQ+ADLKIGVVPVINLEWIQKLHRDRS RGYSTEAV Sbjct: 121 LPENSDLLFYEGLHGAVVTDKVNVAQYADLKIGVVPVINLEWIQKLHRDRSARGYSTEAV 180 Query: 181 TDTILRRMPDYVNYICPQFTETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 TDTILRRMPDYVNYICPQF ETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG Sbjct: 181 TDTILRRMPDYVNYICPQFAETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 Query: 241 IDFPYLLSMIPNSFMSRANSIVVHGAKLDLAMQLILTPLILQLIERKRR 289 IDFPYLLSMIPNSFMSRANSIV+HG+KLDLAMQLILTPLILQLIERKRR Sbjct: 241 IDFPYLLSMIPNSFMSRANSIVIHGSKLDLAMQLILTPLILQLIERKRR 289 >ref|YP_319298.1| phosphoribulokinase/uridine kinase [Nitrobacter winogradskyi Nb-255] gb|ABA05946.1| Phosphoribulokinase/uridine kinase [Nitrobacter winogradskyi Nb-255] Length = 290 Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust. Identities = 255/289 (88%), Positives = 272/289 (94%) Query: 1 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVVAAYIEGDAFHRYDRAEMRSLMAERA 60 MSR+HPIISITGSSGAGTTSVK+TFE IFRRE VVAAYIEGDAFHRY+RAEMR+ MAE + Sbjct: 1 MSRKHPIISITGSSGAGTTSVKRTFEQIFRREKVVAAYIEGDAFHRYNRAEMRTRMAEES 60 Query: 61 ERGNKHFSHFSPETNLFEELEKLFSDYAETGTGTTRHYVHDEEESRLYGAKPGTFTAWEA 120 ++GN+HFSHFSPETNLF ELE +F Y ETGTGTTR+YVHD+ ES L+G PGTFT W+ Sbjct: 61 DKGNRHFSHFSPETNLFAELESVFRSYGETGTGTTRYYVHDDTESALHGVPPGTFTDWQP 120 Query: 121 LPENSDLLFYEGLHGAVVTDKVNVAQHADLKIGVVPVINLEWIQKLHRDRSHRGYSTEAV 180 LPENSDLLFYEGLHGAVVTDKVNVAQ+ADLKIGVVPVINLEWIQKLHRDRS RGYSTEAV Sbjct: 121 LPENSDLLFYEGLHGAVVTDKVNVAQYADLKIGVVPVINLEWIQKLHRDRSARGYSTEAV 180 Query: 181 TDTILRRMPDYVNYICPQFTETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 TDTILRRMPDYVNYICPQF ETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNP+G Sbjct: 181 TDTILRRMPDYVNYICPQFAETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPKG 240 Query: 241 IDFPYLLSMIPNSFMSRANSIVVHGAKLDLAMQLILTPLILQLIERKRR 289 IDFPYLLSMIPNSFMSRANSIV+HG+KLDLAMQLILTPLILQLIERKRR Sbjct: 241 IDFPYLLSMIPNSFMSRANSIVIHGSKLDLAMQLILTPLILQLIERKRR 289 >ref|YP_001203771.1| phosphoribulokinase [Bradyrhizobium sp. ORS 278] emb|CAL75534.1| Phosphoribulokinase (Phosphopentokinase) (PRKase) (PRK) [Bradyrhizobium sp. ORS 278] Length = 291 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 254/291 (87%), Positives = 273/291 (93%) Query: 1 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVVAAYIEGDAFHRYDRAEMRSLMAERA 60 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENV AAYIEGDAFHRY+R EMR M E A Sbjct: 1 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVKAAYIEGDAFHRYNREEMRRKMVEEA 60 Query: 61 ERGNKHFSHFSPETNLFEELEKLFSDYAETGTGTTRHYVHDEEESRLYGAKPGTFTAWEA 120 ERGNKHFSHFSP+TNLFEELEK F DY+ETGTGTTRHYVHD+EE+RLY A+PGTFT W Sbjct: 61 ERGNKHFSHFSPDTNLFEELEKTFRDYSETGTGTTRHYVHDDEEARLYDARPGTFTEWTQ 120 Query: 121 LPENSDLLFYEGLHGAVVTDKVNVAQHADLKIGVVPVINLEWIQKLHRDRSHRGYSTEAV 180 LP +SDLLFYEGLHGAVVT+ VN+AQHADLKIGVVPVINLEWIQKLHRDR+ RGY+TEAV Sbjct: 121 LPADSDLLFYEGLHGAVVTEMVNIAQHADLKIGVVPVINLEWIQKLHRDRASRGYTTEAV 180 Query: 181 TDTILRRMPDYVNYICPQFTETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 TDTILRRMPDYVNYI PQF+ETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG Sbjct: 181 TDTILRRMPDYVNYIIPQFSETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 Query: 241 IDFPYLLSMIPNSFMSRANSIVVHGAKLDLAMQLILTPLILQLIERKRRTI 291 IDFPYLLSMI SFMSRANSIV+HG+KLDLAMQLILTP+I+QL++RKRRT+ Sbjct: 241 IDFPYLLSMIHGSFMSRANSIVIHGSKLDLAMQLILTPMIMQLMDRKRRTL 291 >ref|YP_001242216.1| phosphoribulokinase [Bradyrhizobium sp. BTAi1] gb|ABQ38310.1| Phosphoribulokinase [Bradyrhizobium sp. BTAi1] Length = 291 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 253/291 (86%), Positives = 272/291 (93%) Query: 1 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVVAAYIEGDAFHRYDRAEMRSLMAERA 60 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENV AAYIEGDAFHRY+R EMR M E A Sbjct: 1 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVKAAYIEGDAFHRYNREEMRRKMVEEA 60 Query: 61 ERGNKHFSHFSPETNLFEELEKLFSDYAETGTGTTRHYVHDEEESRLYGAKPGTFTAWEA 120 ERGNKHFSHFSP+TNLFEELEK F DY+ETGTG TRHYVHDEEE+RLY +PG FT W Sbjct: 61 ERGNKHFSHFSPDTNLFEELEKTFRDYSETGTGMTRHYVHDEEEARLYDTRPGNFTEWSR 120 Query: 121 LPENSDLLFYEGLHGAVVTDKVNVAQHADLKIGVVPVINLEWIQKLHRDRSHRGYSTEAV 180 LP++SDLLFYEGLHGAVVT+KVN+AQHADLKIGVVPVINLEWIQKLHRDR+ RGY+TEAV Sbjct: 121 LPDDSDLLFYEGLHGAVVTEKVNIAQHADLKIGVVPVINLEWIQKLHRDRASRGYTTEAV 180 Query: 181 TDTILRRMPDYVNYICPQFTETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 TDTILRRMPDYVNYI PQF+ETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG Sbjct: 181 TDTILRRMPDYVNYIIPQFSETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 Query: 241 IDFPYLLSMIPNSFMSRANSIVVHGAKLDLAMQLILTPLILQLIERKRRTI 291 IDFPYLLSMI SFMSRANSIV+HG+KLDLAMQLILTP+I+QL++RKRRT+ Sbjct: 241 IDFPYLLSMIQGSFMSRANSIVIHGSKLDLAMQLILTPMIMQLMDRKRRTL 291 >ref|YP_571543.1| phosphoribulokinase/uridine kinase [Nitrobacter hamburgensis X14] ref|YP_578937.1| phosphoribulokinase [Nitrobacter hamburgensis X14] gb|ABE64477.1| Phosphoribulokinase [Nitrobacter hamburgensis X14] gb|ABE64711.1| phosphoribulokinase/uridine kinase [Nitrobacter hamburgensis X14] Length = 290 Score = 538 bits (1386), Expect = e-151, Method: Compositional matrix adjust. Identities = 253/289 (87%), Positives = 274/289 (94%) Query: 1 MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVVAAYIEGDAFHRYDRAEMRSLMAERA 60 MSR++PIISITGSSGAGTTSVK+TFE IFRRENVVAAYIEGDAFHRY+RA+MR+ MAE + Sbjct: 1 MSRKYPIISITGSSGAGTTSVKRTFEQIFRRENVVAAYIEGDAFHRYNRADMRTRMAEES 60 Query: 61 ERGNKHFSHFSPETNLFEELEKLFSDYAETGTGTTRHYVHDEEESRLYGAKPGTFTAWEA 120 +RGNKHFSHFSPETNLF+ELE +F Y+E+GTG TR+YVHD+ ES +G PGTFT W+A Sbjct: 61 DRGNKHFSHFSPETNLFDELEAVFRSYSESGTGNTRYYVHDDVESAKHGVPPGTFTDWQA 120 Query: 121 LPENSDLLFYEGLHGAVVTDKVNVAQHADLKIGVVPVINLEWIQKLHRDRSHRGYSTEAV 180 LPENSDLLFYEGLHGAVVTDKVNVAQ+ADLKIGVVPVINLEWIQKLHRDRS RGYSTEAV Sbjct: 121 LPENSDLLFYEGLHGAVVTDKVNVAQYADLKIGVVPVINLEWIQKLHRDRSARGYSTEAV 180 Query: 181 TDTILRRMPDYVNYICPQFTETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 TDTILRRMPDYVNYICPQF ETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG Sbjct: 181 TDTILRRMPDYVNYICPQFAETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG 240 Query: 241 IDFPYLLSMIPNSFMSRANSIVVHGAKLDLAMQLILTPLILQLIERKRR 289 IDFPYLLSMIPNSFMSRANSIV+HG+K+DLAMQLILTPLILQLI+RKRR Sbjct: 241 IDFPYLLSMIPNSFMSRANSIVIHGSKMDLAMQLILTPLILQLIDRKRR 289