BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0014.p (394 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774598.1| multidrug resistance efflux pump [Bradyrhizobiu... 508 e-142 ref|YP_001984972.1| multidrug efflux transporter protein [Rhizob... 459 e-127 gb|EGE59224.1| multidrug efflux transporter protein [Rhizobium e... 455 e-126 ref|YP_765352.1| putative type I HlyD transporter [Rhizobium leg... 454 e-125 ref|YP_002978510.1| secretion protein HlyD family protein [Rhizo... 454 e-125 >ref|NP_774598.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA 110] dbj|BAC53223.1| multidrug resistance efflux pump [Bradyrhizobium japonicum USDA 110] Length = 446 Score = 508 bits (1309), Expect = e-142, Method: Compositional matrix adjust. Identities = 258/323 (79%), Positives = 287/323 (88%), Gaps = 3/323 (0%) Query: 55 AWYGWDYWTVGRFQVSTDDAYVKADNTTIAPKVSGYLSAVLVGDNEHVRAGQMLARIDDR 114 +WYG+DYWTVG++ VSTDDAYVKADNTTIAPKVSGYL+ VLV DNEHV+AGQ+LARIDDR Sbjct: 86 SWYGYDYWTVGQYLVSTDDAYVKADNTTIAPKVSGYLNRVLVADNEHVKAGQVLARIDDR 145 Query: 115 DFRVALDQAKADVAAAEAAIASKHAQLDVQQSVIEAARATLAVDTATQTFAEQENKRYTD 174 DFRVALDQA+ADV AA A IASK AQL+VQQ+VI+AARATL VD A TFA Q+NKRYTD Sbjct: 146 DFRVALDQARADVQAANATIASKEAQLEVQQAVIKAARATLDVDQAALTFAAQDNKRYTD 205 Query: 175 LAGTGFGSVQNAQQAQSRYASAQAAVARDTANLASALRQVELLKADIAQAVAAQARATAL 234 LA TG GSVQNAQQAQSR ASAQA + RDTANLASAL+QV+LLKA+I QA AA ARA A+ Sbjct: 206 LAATGSGSVQNAQQAQSRIASAQATLERDTANLASALKQVDLLKAEIVQAKAAAARAEAV 265 Query: 235 QHQAELNLGYTTITAPIDGVVGNRTLRTGQFVQAGTQLMSLVPATGAYVIANYKETQLTN 294 QHQAELNLGYTT+ +PIDGVVGNR+LR GQFVQAGTQLMS+VP GAYV+AN+KETQLT+ Sbjct: 266 QHQAELNLGYTTVISPIDGVVGNRSLRVGQFVQAGTQLMSIVPTDGAYVVANFKETQLTH 325 Query: 295 VRKGQPVEIAVDMFPGQVVRGHVDSLAPASGQEFALLPPDNATGNFTKVVQRIPVKIALD 354 V+ GQ V+I VDMFPGQ+V G VDS+APASGQEFALLPPDNATGNFTKVVQRIPVKIALD Sbjct: 326 VQAGQAVDIEVDMFPGQIVHGRVDSIAPASGQEFALLPPDNATGNFTKVVQRIPVKIALD 385 Query: 355 AT---AVELRPGMSVIPTIATLS 374 A A+ LRPGMSVIPTIAT S Sbjct: 386 AAHGPAIALRPGMSVIPTIATRS 408 >ref|YP_001984972.1| multidrug efflux transporter protein [Rhizobium etli CIAT 652] gb|ACE94422.1| multidrug efflux transporter protein [Rhizobium etli CIAT 652] Length = 394 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 237/346 (68%), Positives = 277/346 (80%), Gaps = 2/346 (0%) Query: 29 AKPPAAKGRLRRLLLAGAALAVLAGGAWYGWDYWTVGRFQVSTDDAYVKADNTTIAPKVS 88 ++PPA + R LLL A+ ++A A+YG +YWTVGRF+++TDDAYVKADNTT+APKVS Sbjct: 42 SEPPARRRTGRGLLLGATAVVLIAATAYYGHNYWTVGRFEIATDDAYVKADNTTVAPKVS 101 Query: 89 GYLSAVLVGDNEHVRAGQMLARIDDRDFRVALDQAKADVAAAEAAIASKHAQLDVQQSVI 148 GY++ VLV DN V+AGQ LARIDDRDFR ALDQ KADVAAAEA + +K A LD+QQS I Sbjct: 102 GYIAEVLVSDNAVVKAGQPLARIDDRDFRAALDQTKADVAAAEATLNAKQASLDIQQSTI 161 Query: 149 EAARATLAVDTATQTFAEQENKRYTDLAGTGFGSVQNAQQAQSRYASAQAAVARDTANLA 208 AARAT+ VD A +TFAEQ NKRY +LA G+ VQ AQQA S A+AQA + RDTA L Sbjct: 162 AAARATVEVDKANETFAEQNNKRYANLATNGYAPVQTAQQAASTIAAAQATITRDTAALD 221 Query: 209 SALRQVELLKADIAQAVAAQARATALQHQAELNLGYTTITAPIDGVVGNRTLRTGQFVQA 268 +A++QVELL A++AQA A A A+QHQAELNL Y TITAP+DG +GNRTLR GQ+VQA Sbjct: 222 AAVKQVELLNAELAQARATLAHDQAVQHQAELNLSYATITAPVDGTIGNRTLRIGQYVQA 281 Query: 269 GTQLMSLVPATGAYVIANYKETQLTNVRKGQPVEIAVDMFPGQVVRGHVDSLAPASGQEF 328 GTQLMS+VP + YVIANYKETQLT+VR GQPV+I VD FPG+ GHVDSLAPASGQEF Sbjct: 282 GTQLMSVVPTSAVYVIANYKETQLTDVRAGQPVDIEVDTFPGRTYHGHVDSLAPASGQEF 341 Query: 329 ALLPPDNATGNFTKVVQRIPVKIALDATAV--ELRPGMSVIPTIAT 372 ALLPPDNATGNFTKVVQRIPVKI LDA A +LRPGMSV P+I T Sbjct: 342 ALLPPDNATGNFTKVVQRIPVKIVLDAEAANGDLRPGMSVQPSIDT 387 >gb|EGE59224.1| multidrug efflux transporter protein [Rhizobium etli CNPAF512] Length = 394 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 237/346 (68%), Positives = 277/346 (80%), Gaps = 2/346 (0%) Query: 29 AKPPAAKGRLRRLLLAGAALAVLAGGAWYGWDYWTVGRFQVSTDDAYVKADNTTIAPKVS 88 ++PPA + R LLL A+ ++A A+YG +YWTVGRF+++TDDAYVKADNTT+APKVS Sbjct: 42 SEPPARRRTGRGLLLGATAVVLIAATAYYGHNYWTVGRFEIATDDAYVKADNTTVAPKVS 101 Query: 89 GYLSAVLVGDNEHVRAGQMLARIDDRDFRVALDQAKADVAAAEAAIASKHAQLDVQQSVI 148 GY++ VLV DN V+AGQ LARIDDRDFR ALDQ KADVAAAEA + +K A LD+QQS I Sbjct: 102 GYIAEVLVSDNAVVKAGQPLARIDDRDFRAALDQTKADVAAAEATLNAKQASLDIQQSTI 161 Query: 149 EAARATLAVDTATQTFAEQENKRYTDLAGTGFGSVQNAQQAQSRYASAQAAVARDTANLA 208 AARAT+ VD A +TFAEQ NKRY +LA G+ VQ AQQA S A+AQA + RDTA L Sbjct: 162 AAARATVEVDKANETFAEQNNKRYANLATNGYAPVQTAQQAASAIAAAQATITRDTAALD 221 Query: 209 SALRQVELLKADIAQAVAAQARATALQHQAELNLGYTTITAPIDGVVGNRTLRTGQFVQA 268 +A++QVELL A++AQA A A A+QHQAELNL Y TITAP+DG +GNRTLR GQ+VQA Sbjct: 222 AAVKQVELLNAELAQARATLAHDQAVQHQAELNLSYATITAPVDGTIGNRTLRIGQYVQA 281 Query: 269 GTQLMSLVPATGAYVIANYKETQLTNVRKGQPVEIAVDMFPGQVVRGHVDSLAPASGQEF 328 GTQLMS+VP + YVIANYKETQLT+VR GQPV+I VD FPG+ GHVDSLAPASGQEF Sbjct: 282 GTQLMSVVPTSAVYVIANYKETQLTDVRAGQPVDIEVDTFPGRTYHGHVDSLAPASGQEF 341 Query: 329 ALLPPDNATGNFTKVVQRIPVKIALDATAV--ELRPGMSVIPTIAT 372 ALLPPDNATGNFTKVVQRIPVKI LDA A +LRPGMSV P+I T Sbjct: 342 ALLPPDNATGNFTKVVQRIPVKIVLDAEAANGDLRPGMSVQPSIDT 387 >ref|YP_765352.1| putative type I HlyD transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK03770.1| putative type I HlyD transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 394 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 244/344 (70%), Positives = 284/344 (82%), Gaps = 3/344 (0%) Query: 32 PAAKGRLRRLLLAGAALAVLAGGAWYGWDYWTVGRFQVSTDDAYVKADNTTIAPKVSGYL 91 PA K R LLL AL ++A GA+YG DYWTVGRF +STDDAYVKADN+TIAPKVSGYL Sbjct: 46 PARKRGGRSLLLGATALVLIAAGAYYGHDYWTVGRFHISTDDAYVKADNSTIAPKVSGYL 105 Query: 92 SAVLVGDNEHVRAGQMLARIDDRDFRVALDQAKADVAAAEAAIASKHAQLDVQQSVIEAA 151 + VLV DNE V+AGQ LARIDDRDF+ ALDQA ADVAAAEA + +K A LD+QQS I AA Sbjct: 106 AEVLVMDNETVKAGQPLARIDDRDFKAALDQASADVAAAEATVNAKQASLDIQQSTIAAA 165 Query: 152 RATLAVDTATQTFAEQENKRYTDLAGTGFGSVQNAQQAQSRYASAQAAVARDTANLASAL 211 RAT+ VD A +TFAEQ NKRY++LA +G+ VQ AQQA S+ A+AQA++ RD+A+L +A+ Sbjct: 166 RATVDVDRANETFAEQNNKRYSNLATSGYAPVQTAQQAASQIAAAQASIVRDSASLDAAV 225 Query: 212 RQVELLKADIAQAVAAQARATALQHQAELNLGYTTITAPIDGVVGNRTLRTGQFVQAGTQ 271 +QV+LL A++AQA AA AR+ A+QHQAELNL Y TITAP+DG VGNRTLR GQ+VQAGTQ Sbjct: 226 KQVDLLNAELAQAKAALARSQAVQHQAELNLSYATITAPVDGTVGNRTLRVGQYVQAGTQ 285 Query: 272 LMSLVPATGAYVIANYKETQLTNVRKGQPVEIAVDMFPGQVVRGHVDSLAPASGQEFALL 331 LMS+VP T AYVIANYKETQLT+V+ GQPV+I VDMFPG+ GHVDSLAPASGQEFALL Sbjct: 286 LMSVVPTTAAYVIANYKETQLTDVKAGQPVDIEVDMFPGRTYHGHVDSLAPASGQEFALL 345 Query: 332 PPDNATGNFTKVVQRIPVKIALDATAV---ELRPGMSVIPTIAT 372 PPDNATGNFTKVVQRIPVKI LD A +LRPGMSV P+I T Sbjct: 346 PPDNATGNFTKVVQRIPVKIVLDGDAAANGDLRPGMSVQPSIDT 389 >ref|YP_002978510.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS60759.1| secretion protein HlyD family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 394 Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust. Identities = 244/344 (70%), Positives = 283/344 (82%), Gaps = 3/344 (0%) Query: 32 PAAKGRLRRLLLAGAALAVLAGGAWYGWDYWTVGRFQVSTDDAYVKADNTTIAPKVSGYL 91 PA + R LLL AL ++A GA+YG DYWTVGRF +STDDAYVKADN+TIAPKVSGYL Sbjct: 46 PAGRRGGRSLLLGATALVLIAAGAYYGHDYWTVGRFHISTDDAYVKADNSTIAPKVSGYL 105 Query: 92 SAVLVGDNEHVRAGQMLARIDDRDFRVALDQAKADVAAAEAAIASKHAQLDVQQSVIEAA 151 + VLV DNE V+AGQ LARIDDRDF+ ALDQA ADVAAAEA + +K A LD+QQS I AA Sbjct: 106 AEVLVMDNETVKAGQPLARIDDRDFKAALDQASADVAAAEATVNAKQASLDIQQSTIAAA 165 Query: 152 RATLAVDTATQTFAEQENKRYTDLAGTGFGSVQNAQQAQSRYASAQAAVARDTANLASAL 211 RAT+ VD A +TFAEQ NKRY++LA +G+ VQ AQQA S+ A+AQA++ RDTA+L +A+ Sbjct: 166 RATVDVDRANETFAEQNNKRYSNLATSGYAPVQTAQQAASQIAAAQASIVRDTASLDAAV 225 Query: 212 RQVELLKADIAQAVAAQARATALQHQAELNLGYTTITAPIDGVVGNRTLRTGQFVQAGTQ 271 +QV+LL A++AQA AA AR+ A+QHQAELNL Y TITAP+DG VGNRTLR GQ+VQAGTQ Sbjct: 226 KQVDLLNAELAQAKAALARSQAVQHQAELNLSYATITAPVDGTVGNRTLRVGQYVQAGTQ 285 Query: 272 LMSLVPATGAYVIANYKETQLTNVRKGQPVEIAVDMFPGQVVRGHVDSLAPASGQEFALL 331 LMS+VP T AYVIANYKETQLT+V+ GQPV+I VDMFPG+ GHVDSLAPASGQEFALL Sbjct: 286 LMSVVPTTAAYVIANYKETQLTDVKAGQPVDIEVDMFPGRTYHGHVDSLAPASGQEFALL 345 Query: 332 PPDNATGNFTKVVQRIPVKIALDATAV---ELRPGMSVIPTIAT 372 PPDNATGNFTKVVQRIPVKI LD A +LRPGMSV P I T Sbjct: 346 PPDNATGNFTKVVQRIPVKIVLDGDAAANGDLRPGMSVQPDINT 389