BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0011.p         (152 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774235.1| hypothetical protein blr7595 [Bradyrhizobium ja...   274   3e-72
ref|YP_578471.1| alkylhydroperoxidase AhpD core [Nitrobacter ham...   244   4e-63
ref|YP_001990321.1| alkylhydroperoxidase like protein [Rhodopseu...   218   2e-55
ref|YP_485426.1| alkylhydroperoxidase [Rhodopseudomonas palustri...   216   6e-55
ref|ZP_08630793.1| alkylhydroperoxidase AhpD family core domain-...   216   8e-55

>ref|NP_774235.1| hypothetical protein blr7595 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52860.1| blr7595 [Bradyrhizobium japonicum USDA 110]
          Length = 153

 Score =  274 bits (701), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/151 (84%), Positives = 141/151 (93%)

Query: 1   MKPRMNFYQAAPETIKALVAVENQIAASGLEQSLIELVKTRASQINGCAYCINMHTEDAR 60
           MKPRMN+YQAAP+T+KAL+AV++QI ASGLEQSLIELVKTRASQINGCA+CINMHTEDAR
Sbjct: 1   MKPRMNYYQAAPDTLKALIAVDDQIKASGLEQSLIELVKTRASQINGCAFCINMHTEDAR 60

Query: 61  KHGETEQRLYLLNAWRESPLYSERERAALAWTEALTLVSETHAPDADYEAVRAQFSDSEL 120
           K GETEQRLYLLNAWRESPLY++RERAALAWTEA+TL+SETHAPD  YE VRAQFS+ E 
Sbjct: 61  KRGETEQRLYLLNAWRESPLYTDRERAALAWTEAVTLISETHAPDDIYEQVRAQFSEQET 120

Query: 121 VNLTTLIGAINAWNRIAIGFRALHPVKAKAA 151
           VNLTTLIG INAWNRIAI FRA+HPVK KA+
Sbjct: 121 VNLTTLIGTINAWNRIAISFRAVHPVKVKAS 151


>ref|YP_578471.1| alkylhydroperoxidase AhpD core [Nitrobacter hamburgensis X14]
 gb|ABE64011.1| Alkylhydroperoxidase AhpD core [Nitrobacter hamburgensis X14]
          Length = 152

 Score =  244 bits (622), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 115/152 (75%), Positives = 133/152 (87%)

Query: 1   MKPRMNFYQAAPETIKALVAVENQIAASGLEQSLIELVKTRASQINGCAYCINMHTEDAR 60
           MK R+N YQAAP+T+KAL A+E Q+ ASGLE+ LIELVKTRASQINGCA+CI+MHT+DAR
Sbjct: 1   MKARLNPYQAAPQTMKALQALETQLQASGLEKPLIELVKTRASQINGCAFCIDMHTQDAR 60

Query: 61  KHGETEQRLYLLNAWRESPLYSERERAALAWTEALTLVSETHAPDADYEAVRAQFSDSEL 120
           K GETEQRLYLLNAWRESPLY++RERAALAWTEA+TLVSETH PD  Y+ VR  FS++E 
Sbjct: 61  KQGETEQRLYLLNAWRESPLYTDRERAALAWTEAVTLVSETHVPDDVYDDVRRHFSEAET 120

Query: 121 VNLTTLIGAINAWNRIAIGFRALHPVKAKAAA 152
           VNLT L+ AINAWNRIAI FR++HPVKA  AA
Sbjct: 121 VNLTMLVAAINAWNRIAISFRSIHPVKAAHAA 152


>ref|YP_001990321.1| alkylhydroperoxidase like protein [Rhodopseudomonas palustris
           TIE-1]
 gb|ACE99845.1| alkylhydroperoxidase like protein, AhpD family [Rhodopseudomonas
           palustris TIE-1]
          Length = 155

 Score =  218 bits (556), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/152 (71%), Positives = 126/152 (82%)

Query: 1   MKPRMNFYQAAPETIKALVAVENQIAASGLEQSLIELVKTRASQINGCAYCINMHTEDAR 60
           M PR+N   AAP+  KA+VA+E  I  SGLE SLIELVK RASQINGCA+C++MH++DAR
Sbjct: 1   MTPRLNPAAAAPDAYKAMVALEKYIQGSGLEPSLIELVKMRASQINGCAFCLDMHSKDAR 60

Query: 61  KHGETEQRLYLLNAWRESPLYSERERAALAWTEALTLVSETHAPDADYEAVRAQFSDSEL 120
             GE+EQRLYLLNAWRESPLY++RERAAL WTEALTLV++T APD DY AV++ FSD+E 
Sbjct: 61  ARGESEQRLYLLNAWRESPLYTDRERAALGWTEALTLVAQTQAPDQDYAAVKSHFSDAEQ 120

Query: 121 VNLTTLIGAINAWNRIAIGFRALHPVKAKAAA 152
           VNLT LIGAIN WNRIAIGFR LHP+ A A A
Sbjct: 121 VNLTLLIGAINTWNRIAIGFRMLHPIPAVAHA 152


>ref|YP_485426.1| alkylhydroperoxidase [Rhodopseudomonas palustris HaA2]
 gb|ABD06515.1| Alkylhydroperoxidase [Rhodopseudomonas palustris HaA2]
          Length = 155

 Score =  216 bits (551), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 106/146 (72%), Positives = 123/146 (84%)

Query: 1   MKPRMNFYQAAPETIKALVAVENQIAASGLEQSLIELVKTRASQINGCAYCINMHTEDAR 60
           MKPR+N   AAP+  KA++A+E  I ASGLE SLIELVK RASQINGCA+C++MH++DAR
Sbjct: 1   MKPRLNPAAAAPDAYKAMIALETTIKASGLEPSLIELVKMRASQINGCAFCLDMHSKDAR 60

Query: 61  KHGETEQRLYLLNAWRESPLYSERERAALAWTEALTLVSETHAPDADYEAVRAQFSDSEL 120
            HGETEQRLYLLNAWRESP Y++RERAALAW EALTLV++THAPDADYE +   FS +E 
Sbjct: 61  AHGETEQRLYLLNAWRESPAYTDRERAALAWAEALTLVAQTHAPDADYELLTQHFSAAEQ 120

Query: 121 VNLTTLIGAINAWNRIAIGFRALHPV 146
            NLT LIGAIN WNRIAIGFR +HPV
Sbjct: 121 ANLTILIGAINTWNRIAIGFRLIHPV 146


>ref|ZP_08630793.1| alkylhydroperoxidase AhpD family core domain-containing protein
           [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06510.1| alkylhydroperoxidase AhpD family core domain-containing protein
           [Bradyrhizobiaceae bacterium SG-6C]
          Length = 154

 Score =  216 bits (550), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 104/146 (71%), Positives = 122/146 (83%), Gaps = 1/146 (0%)

Query: 1   MKPRMNF-YQAAPETIKALVAVENQIAASGLEQSLIELVKTRASQINGCAYCINMHTEDA 59
           M PR+   ++AAPE  KA+ A+E  I ASGLE SLIELVK RASQINGCAYCI+MH+ DA
Sbjct: 1   MTPRIAAPFKAAPEAYKAMAALEAAIKASGLEHSLIELVKMRASQINGCAYCIHMHSTDA 60

Query: 60  RKHGETEQRLYLLNAWRESPLYSERERAALAWTEALTLVSETHAPDADYEAVRAQFSDSE 119
           RK GETE RLY+LNAWRES LY+ RERAALAWTE+LTLV+ T APD+DY+ V+A+FS++E
Sbjct: 61  RKAGETEMRLYMLNAWRESTLYTPRERAALAWTESLTLVAATGAPDSDYDLVKAEFSEAE 120

Query: 120 LVNLTTLIGAINAWNRIAIGFRALHP 145
            VNLT LIGAINAWNR+AIGFR  HP
Sbjct: 121 QVNLTMLIGAINAWNRLAIGFRMAHP 146