BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0010.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774236.1| D-amino acid aminotransferase [Bradyrhizobium j... 459 e-127 ref|YP_001208009.1| D-amino acid aminotransferase [Bradyrhizobiu... 443 e-122 ref|YP_001237763.1| D-amino acid aminotransferase [Bradyrhizobiu... 440 e-121 ref|YP_001524879.1| D-amino acid aminotransferase [Azorhizobium ... 370 e-100 ref|YP_001758264.1| class IV aminotransferase [Methylobacterium ... 343 3e-92 >ref|NP_774236.1| D-amino acid aminotransferase [Bradyrhizobium japonicum USDA 110] dbj|BAC52861.1| D-alanine aminotransferase [Bradyrhizobium japonicum USDA 110] Length = 313 Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust. Identities = 233/286 (81%), Positives = 261/286 (91%) Query: 1 VEKIAYVNGSFVPHSEAKVSVFDRGFLFADGIYEVAAVLEGKLIDNASHLARLKRSVGEI 60 ++ IAYVNGSFVP S+AK+SV DRGFLFADGIYEV+AVL+GKL+DNASHLARL+RSVGEI Sbjct: 28 LDSIAYVNGSFVPLSDAKISVLDRGFLFADGIYEVSAVLDGKLVDNASHLARLERSVGEI 87 Query: 61 QLALPETLERIEEIQKELVARNDLVNGMVYLEVTRGADKGRDFAFPKADVKPTLVMFTSE 120 L LPET++RI E+QKEL+ARN L +G+VYL+VTRGADKGRDF FPKADV+ +LVMFTSE Sbjct: 88 SLRLPETVDRITELQKELIARNKLGSGLVYLQVTRGADKGRDFPFPKADVRSSLVMFTSE 147 Query: 121 KDIINAPSAKTGINVITVPDIRWERRDIKSVALLAQVLAKQAAAAAGAGEAWMIEDGKVT 180 KDIINA SAKTGINVITVPDIRWERRDIKSVALLAQVLAKQAAA AGAGEAWM++DG VT Sbjct: 148 KDIINAASAKTGINVITVPDIRWERRDIKSVALLAQVLAKQAAAEAGAGEAWMLQDGYVT 207 Query: 181 EGGSSSSFIVTHDDVIVTRQNGNEILPGCTRKAVVKLAEERQLRIEERTFTVEEALAAKE 240 EGGSSS+FI+T DDVIVTR+N N ILPGCTRKAV+ LAEERQLR+EER+FTV EALAAKE Sbjct: 208 EGGSSSAFILTKDDVIVTRKNSNAILPGCTRKAVIALAEERQLRVEERSFTVAEALAAKE 267 Query: 241 AFITSASVFVQGVVAIDGKKIGGGKVGPITDRLREIYIEFARATAV 286 AFITSAS FVQ VVAIDGK IG GK GP+ RLREIY+EFA+ATAV Sbjct: 268 AFITSASSFVQPVVAIDGKTIGDGKPGPMATRLREIYVEFAKATAV 313 >ref|YP_001208009.1| D-amino acid aminotransferase [Bradyrhizobium sp. ORS 278] emb|CAL79794.1| Putative D-alanine aminotransferase [Bradyrhizobium sp. ORS 278] Length = 286 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 234/286 (81%), Positives = 257/286 (89%) Query: 1 VEKIAYVNGSFVPHSEAKVSVFDRGFLFADGIYEVAAVLEGKLIDNASHLARLKRSVGEI 60 ++ IAYVNG+FVP SEAKVSV DRGFLFADGIYEVAAVL+GKL+D+ SHLARL+RSVGEI Sbjct: 1 MDPIAYVNGTFVPLSEAKVSVLDRGFLFADGIYEVAAVLDGKLVDSESHLARLERSVGEI 60 Query: 61 QLALPETLERIEEIQKELVARNDLVNGMVYLEVTRGADKGRDFAFPKADVKPTLVMFTSE 120 LALPE+L RIEE+QKELVARN L GMVYL+VTRGADKGRDF FPK DVKPTLVMF + Sbjct: 61 GLALPESLSRIEELQKELVARNQLDQGMVYLQVTRGADKGRDFPFPKGDVKPTLVMFVTA 120 Query: 121 KDIINAPSAKTGINVITVPDIRWERRDIKSVALLAQVLAKQAAAAAGAGEAWMIEDGKVT 180 K+I++APSAKTGI VITVPDIRW RRDIKSVALLAQVLAKQAAAAAGA EAWM+EDG VT Sbjct: 121 KNIVDAPSAKTGIGVITVPDIRWARRDIKSVALLAQVLAKQAAAAAGASEAWMVEDGHVT 180 Query: 181 EGGSSSSFIVTHDDVIVTRQNGNEILPGCTRKAVVKLAEERQLRIEERTFTVEEALAAKE 240 EGGSSS+FI+T DDVIVTR N N ILPGCTRKAVVKLAEERQL++EER FTVEEALAAKE Sbjct: 181 EGGSSSTFILTQDDVIVTRPNSNAILPGCTRKAVVKLAEERQLKVEERLFTVEEALAAKE 240 Query: 241 AFITSASVFVQGVVAIDGKKIGGGKVGPITDRLREIYIEFARATAV 286 AFITSAS FVQ VV IDGK +G GKVGP+ RLREIY++FARATAV Sbjct: 241 AFITSASSFVQPVVTIDGKPVGDGKVGPVATRLREIYVDFARATAV 286 >ref|YP_001237763.1| D-amino acid aminotransferase [Bradyrhizobium sp. BTAi1] gb|ABQ33857.1| D-alanine aminotransferase apoenzyme [Bradyrhizobium sp. BTAi1] Length = 286 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 232/286 (81%), Positives = 257/286 (89%) Query: 1 VEKIAYVNGSFVPHSEAKVSVFDRGFLFADGIYEVAAVLEGKLIDNASHLARLKRSVGEI 60 +E IAYVNG+FVP SEAKVS+ DRGFLFADGIYEVAAVL+GKL+D+ASHLARL+RSVGEI Sbjct: 1 MEPIAYVNGAFVPLSEAKVSILDRGFLFADGIYEVAAVLDGKLVDSASHLARLERSVGEI 60 Query: 61 QLALPETLERIEEIQKELVARNDLVNGMVYLEVTRGADKGRDFAFPKADVKPTLVMFTSE 120 LALPE+L RIEE+QKELVARN L GMVYL+VTRGADKGRDF FPK DV+PTLVMF + Sbjct: 61 GLALPESLARIEELQKELVARNQLDQGMVYLQVTRGADKGRDFPFPKGDVRPTLVMFVTA 120 Query: 121 KDIINAPSAKTGINVITVPDIRWERRDIKSVALLAQVLAKQAAAAAGAGEAWMIEDGKVT 180 K I++APSAK GI VITVPDIRWERRDIKSVALLAQVLAKQAAAAAGA EAWM+EDG VT Sbjct: 121 KTIVDAPSAKAGIAVITVPDIRWERRDIKSVALLAQVLAKQAAAAAGASEAWMVEDGHVT 180 Query: 181 EGGSSSSFIVTHDDVIVTRQNGNEILPGCTRKAVVKLAEERQLRIEERTFTVEEALAAKE 240 EGGSS++FI+T DDVIVTR N N ILPGCTRKAVVKLAEERQL++EER FTV EALAAKE Sbjct: 181 EGGSSTAFILTRDDVIVTRPNSNAILPGCTRKAVVKLAEERQLKVEERLFTVAEALAAKE 240 Query: 241 AFITSASVFVQGVVAIDGKKIGGGKVGPITDRLREIYIEFARATAV 286 AFITSAS FVQ VV+IDGK +G GKVGP+ RLREIY++FARATAV Sbjct: 241 AFITSASSFVQPVVSIDGKPVGDGKVGPVATRLREIYVDFARATAV 286 >ref|YP_001524879.1| D-amino acid aminotransferase [Azorhizobium caulinodans ORS 571] dbj|BAF87961.1| D-alanine aminotransferase [Azorhizobium caulinodans ORS 571] Length = 284 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 192/286 (67%), Positives = 232/286 (81%), Gaps = 2/286 (0%) Query: 1 VEKIAYVNGSFVPHSEAKVSVFDRGFLFADGIYEVAAVLEGKLIDNASHLARLKRSVGEI 60 +++IAYVNG FVP +EA++S DRGFLFADGIYEV+AVL+GKL+DN SHLARLKRSVGEI Sbjct: 1 MDRIAYVNGDFVPLAEARISPLDRGFLFADGIYEVSAVLDGKLVDNDSHLARLKRSVGEI 60 Query: 61 QLALPETLERIEEIQKELVARNDLVNGMVYLEVTRGADKGRDFAFPKADVKPTLVMFTSE 120 L LP TLE + E+++ELV RN L G+VY++VTRG RDF FPK D KPTL MFT E Sbjct: 61 ALDLPVTLEELVELERELVRRNSLTEGVVYMQVTRGV-ADRDFTFPK-DAKPTLFMFTQE 118 Query: 121 KDIINAPSAKTGINVITVPDIRWERRDIKSVALLAQVLAKQAAAAAGAGEAWMIEDGKVT 180 K+I+ + +A+TGI V +VPD+RW RRDIKSVALLAQVLAKQAAA AG EAWM++DG +T Sbjct: 119 KNILASKAAETGIRVKSVPDLRWARRDIKSVALLAQVLAKQAAAEAGCQEAWMVQDGFIT 178 Query: 181 EGGSSSSFIVTHDDVIVTRQNGNEILPGCTRKAVVKLAEERQLRIEERTFTVEEALAAKE 240 EGGSSS+FI+T +DV+VTR N +LPGCTR+A++ LA E + +EER FT++EALAAKE Sbjct: 179 EGGSSSAFIITANDVVVTRPNSTAVLPGCTRRALLALAAEGTITVEERLFTLDEALAAKE 238 Query: 241 AFITSASVFVQGVVAIDGKKIGGGKVGPITDRLREIYIEFARATAV 286 AFI SAS FVQ VVAID K IG G GP+T RLRE+YI FAR TAV Sbjct: 239 AFIASASSFVQAVVAIDDKPIGTGTPGPLTKRLRELYIAFARQTAV 284 >ref|YP_001758264.1| class IV aminotransferase [Methylobacterium radiotolerans JCM 2831] gb|ACB27581.1| aminotransferase class IV [Methylobacterium radiotolerans JCM 2831] Length = 285 Score = 343 bits (879), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 170/280 (60%), Positives = 213/280 (76%), Gaps = 1/280 (0%) Query: 3 KIAYVNGSFVPHSEAKVSVFDRGFLFADGIYEVAAVLEGKLIDNASHLARLKRSVGEIQL 62 +I Y+NG F+P+ EA+V + DRGFLFADGIYEV+A+++GKL+DNA+HLARL RS+GEI + Sbjct: 5 RIVYLNGQFLPYEEARVPIMDRGFLFADGIYEVSAIIDGKLVDNAAHLARLDRSLGEIGI 64 Query: 63 ALPETLERIEEIQKELVARNDLVNGMVYLEVTRGADKGRDFAFPKADVKPTLVMFTSEKD 122 P E +Q ELVARN + G+VY++VTRG + RDFAFPKA +PT+VMFT K Sbjct: 65 RNPHDAAGWERLQTELVARNGVAEGLVYMQVTRGVAE-RDFAFPKAGTEPTVVMFTQAKT 123 Query: 123 IINAPSAKTGINVITVPDIRWERRDIKSVALLAQVLAKQAAAAAGAGEAWMIEDGKVTEG 182 ++ P A+TG VITV D+RW+RRDIKSVALLAQVLAKQ AA AG EAWMIEDG VTEG Sbjct: 124 VLANPLAETGARVITVEDLRWKRRDIKSVALLAQVLAKQQAAEAGVAEAWMIEDGAVTEG 183 Query: 183 GSSSSFIVTHDDVIVTRQNGNEILPGCTRKAVVKLAEERQLRIEERTFTVEEALAAKEAF 242 SS++FI++ D V+VTR +LPG TR +V++LA+E LRIEER V+E AA+EAF Sbjct: 184 SSSTAFIISRDRVLVTRPLSTALLPGITRASVLRLAQEADLRIEERLIPVDEVYAAQEAF 243 Query: 243 ITSASVFVQGVVAIDGKKIGGGKVGPITDRLREIYIEFAR 282 TSAS FV VV IDG+ IG G+ G +T RLRE+YIE AR Sbjct: 244 YTSASAFVMPVVEIDGRAIGEGRPGALTRRLRELYIEAAR 283