BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0027.0006.p (305 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bra... 538 e-151 ref|YP_001208013.1| glutamate/aspartate ABC transporter substrat... 508 e-142 ref|YP_002499648.1| family 3 extracellular solute-binding protei... 461 e-128 ref|YP_427174.1| extracellular solute-binding protein [Rhodospir... 455 e-126 ref|YP_001771318.1| extracellular solute-binding protein [Methyl... 452 e-125 >ref|NP_774240.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52865.1| ABC transporter amino-acid-binding protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 259/296 (87%), Positives = 278/296 (93%) Query: 7 IGLALAAAVGASQAQAQELTGTLKNIKDTGAITLGYRDSSIPFSYLDDNQKPVGYAMEIC 66 IGLALAA SQA AQELTGTLKNIKDTGAITLG+RDSSIPFSYLDDNQKP+G+AM+IC Sbjct: 7 IGLALAATFVVSQAGAQELTGTLKNIKDTGAITLGFRDSSIPFSYLDDNQKPIGFAMDIC 66 Query: 67 YKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTVDLECGSTTNNAERQKQVSFTNSH 126 YKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGT+DLECGSTTNNA+RQKQV+FTN+H Sbjct: 67 YKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTIDLECGSTTNNADRQKQVAFTNTH 126 Query: 127 FLTASRYVTKKASKINSIDDLKGKTVVSTAGTTNIKQLTEANLARGLSVNIIPAKDHAEA 186 FLTASRYV KK+S + SIDDLKGKTVVSTAGTTNIKQLTEAN+A+GL NIIPAKDHAE+ Sbjct: 127 FLTASRYVFKKSSGLKSIDDLKGKTVVSTAGTTNIKQLTEANVAKGLGANIIPAKDHAES 186 Query: 187 FLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDAPFKKVV 246 FLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDAPFKKVV Sbjct: 187 FLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDAPFKKVV 246 Query: 247 DAATAALYTSAEGQKIYDKWFTQKIPPKGLNLNVPLGPEMKKQLAKPSDSPDPDAY 302 DAATAALYTS EGQKIY+KWFT KIPPKGLNLN P+ E+K + AKP+DSP+PD Y Sbjct: 247 DAATAALYTSGEGQKIYEKWFTAKIPPKGLNLNTPISAELKNEFAKPTDSPNPDDY 302 >ref|YP_001208013.1| glutamate/aspartate ABC transporter substrate binding protein [Bradyrhizobium sp. ORS 278] emb|CAL79798.1| glutamate/aspartate ABC transporter (substrate binding protein) [Bradyrhizobium sp. ORS 278] Length = 304 Score = 508 bits (1308), Expect = e-142, Method: Compositional matrix adjust. Identities = 246/302 (81%), Positives = 268/302 (88%) Query: 1 MTRKYLIGLALAAAVGASQAQAQELTGTLKNIKDTGAITLGYRDSSIPFSYLDDNQKPVG 60 M + L GLA AAA+ A Q QA++LTGTLK IK+TGAITLG RDSSIPFSYLDDNQKPVG Sbjct: 1 MKQLRLFGLAFAAALCAGQVQAEDLTGTLKTIKETGAITLGVRDSSIPFSYLDDNQKPVG 60 Query: 61 YAMEICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTVDLECGSTTNNAERQKQV 120 +A++IC IVDAVKKELKLDKLEVKLNPVTS+TRIPL+ANGT+DLECGSTTNNAERQKQ+ Sbjct: 61 FAIDICMGIVDAVKKELKLDKLEVKLNPVTSSTRIPLLANGTIDLECGSTTNNAERQKQI 120 Query: 121 SFTNSHFLTASRYVTKKASKINSIDDLKGKTVVSTAGTTNIKQLTEANLARGLSVNIIPA 180 SFTN+HFLTASRYV+KKAS I IDDLKGK VVSTAGTTNIKQLTEAN ARGL +NIIPA Sbjct: 121 SFTNTHFLTASRYVSKKASNITKIDDLKGKPVVSTAGTTNIKQLTEANAARGLGINIIPA 180 Query: 181 KDHAEAFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDA 240 KDHAEAFLMVETDRAVAFVMDDILLASLVA SK P YVIS DAFSKPEPYGIMLRKDD Sbjct: 181 KDHAEAFLMVETDRAVAFVMDDILLASLVASSKDPAAYVISSDAFSKPEPYGIMLRKDDP 240 Query: 241 PFKKVVDAATAALYTSAEGQKIYDKWFTQKIPPKGLNLNVPLGPEMKKQLAKPSDSPDPD 300 FKKVVDAATA +YTS EG K+YDKWF QKIPPKGLNLN P+ E+K + AKPSDSPDP+ Sbjct: 241 QFKKVVDAATAKIYTSGEGAKLYDKWFMQKIPPKGLNLNTPISAELKAEFAKPSDSPDPE 300 Query: 301 AY 302 +Y Sbjct: 301 SY 302 >ref|YP_002499648.1| family 3 extracellular solute-binding protein [Methylobacterium nodulans ORS 2060] gb|ACL59345.1| extracellular solute-binding protein family 3 [Methylobacterium nodulans ORS 2060] Length = 301 Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/302 (73%), Positives = 251/302 (83%), Gaps = 1/302 (0%) Query: 1 MTRKYLIGLALAAAVGASQAQAQELTGTLKNIKDTGAITLGYRDSSIPFSYLDDNQKPVG 60 M K L+ L L A + A A A+ELTGTLK IK+TGAITLGYRDSS+PFSYLD NQKPVG Sbjct: 1 MPLKRLLPL-LVAGLAAMPASAEELTGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVG 59 Query: 61 YAMEICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTVDLECGSTTNNAERQKQV 120 YAM+ICYKIV+AVK +L + LEVKLNPVTSATRIPLMANGT+DLECGSTTNNAERQKQV Sbjct: 60 YAMDICYKIVEAVKAKLAMPNLEVKLNPVTSATRIPLMANGTIDLECGSTTNNAERQKQV 119 Query: 121 SFTNSHFLTASRYVTKKASKINSIDDLKGKTVVSTAGTTNIKQLTEANLARGLSVNIIPA 180 +FTN+HFLTA+R+V KKAS +N +DLKGKTVVST+GTTNIKQ+ E N A + I+PA Sbjct: 120 AFTNTHFLTANRFVAKKASNVNKFEDLKGKTVVSTSGTTNIKQINEYNAAHKFGMTILPA 179 Query: 181 KDHAEAFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDA 240 KDHAEAFLMVET RAVAFVMDD+LLASL AGSK PD Y+ISKDA SKPEPYGIMLRKDDA Sbjct: 180 KDHAEAFLMVETGRAVAFVMDDVLLASLAAGSKEPDAYMISKDAISKPEPYGIMLRKDDA 239 Query: 241 PFKKVVDAATAALYTSAEGQKIYDKWFTQKIPPKGLNLNVPLGPEMKKQLAKPSDSPDPD 300 PFKKV D ATAA Y S EG YDKWFT+ IPP+ +NLN+P+ MKK A+PSDSPDP Sbjct: 240 PFKKVADEATAAFYRSPEGPATYDKWFTKPIPPRNINLNLPMDAAMKKAFAQPSDSPDPA 299 Query: 301 AY 302 Y Sbjct: 300 MY 301 >ref|YP_427174.1| extracellular solute-binding protein [Rhodospirillum rubrum ATCC 11170] gb|ABC22887.1| extracellular solute-binding protein, family 3 [Rhodospirillum rubrum ATCC 11170] gb|AEO48610.1| extracellular solute-binding protein [Rhodospirillum rubrum F11] Length = 305 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 224/303 (73%), Positives = 252/303 (83%) Query: 1 MTRKYLIGLALAAAVGASQAQAQELTGTLKNIKDTGAITLGYRDSSIPFSYLDDNQKPVG 60 M+ K+++ LA A + A A A+ELTGTLK IK+TG I +G+RDSSIPFSYLDDNQKP+G Sbjct: 1 MSFKHVVALAAAFGLLAGSASAEELTGTLKKIKETGEIAIGHRDSSIPFSYLDDNQKPIG 60 Query: 61 YAMEICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTVDLECGSTTNNAERQKQV 120 YAM+IC +V+AVK ELKLD L VKL PVTSATRIPL+ANGTVDLECGSTTNN +RQ+Q Sbjct: 61 YAMDICAHVVEAVKAELKLDTLAVKLTPVTSATRIPLIANGTVDLECGSTTNNLDRQQQA 120 Query: 121 SFTNSHFLTASRYVTKKASKINSIDDLKGKTVVSTAGTTNIKQLTEANLARGLSVNIIPA 180 SFTNSHFLTASR+V+KK S + SIDDLKGKTVVSTAGTTNIKQ+ E N ARGL + IIPA Sbjct: 121 SFTNSHFLTASRFVSKKTSNLKSIDDLKGKTVVSTAGTTNIKQVNELNTARGLGIKIIPA 180 Query: 181 KDHAEAFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDA 240 KDHAE FLMVETDRAVAF MDDILLA+LVAGSK+P YVIS+DAFS PEPYGIMLRKDD Sbjct: 181 KDHAEGFLMVETDRAVAFAMDDILLATLVAGSKTPSAYVISEDAFSLPEPYGIMLRKDDP 240 Query: 241 PFKKVVDAATAALYTSAEGQKIYDKWFTQKIPPKGLNLNVPLGPEMKKQLAKPSDSPDPD 300 FK VVD ATAALYTS EG K++ KWF IPPKGLN+N+PL MK LA PSDS DP Sbjct: 241 AFKAVVDRATAALYTSPEGPKLFAKWFENPIPPKGLNVNLPLAGAMKNALAHPSDSADPK 300 Query: 301 AYL 303 AYL Sbjct: 301 AYL 303 >ref|YP_001771318.1| extracellular solute-binding protein [Methylobacterium sp. 4-46] gb|ACA18884.1| extracellular solute-binding protein family 3 [Methylobacterium sp. 4-46] Length = 301 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 221/302 (73%), Positives = 249/302 (82%), Gaps = 1/302 (0%) Query: 1 MTRKYLIGLALAAAVGASQAQAQELTGTLKNIKDTGAITLGYRDSSIPFSYLDDNQKPVG 60 M K L+ L L A A A A+EL+GTLK IK+TGAITLGYRDSS+PFSYLD NQKPVG Sbjct: 1 MAPKRLLIL-LVAGFAALPASAEELSGTLKKIKETGAITLGYRDSSVPFSYLDGNQKPVG 59 Query: 61 YAMEICYKIVDAVKKELKLDKLEVKLNPVTSATRIPLMANGTVDLECGSTTNNAERQKQV 120 YAM+ICYK+VDAVK +L L LEVKLNPVTSATRIPL+ANGTVDLECGSTTNN +RQKQV Sbjct: 60 YAMDICYKVVDAVKAKLGLPNLEVKLNPVTSATRIPLIANGTVDLECGSTTNNVDRQKQV 119 Query: 121 SFTNSHFLTASRYVTKKASKINSIDDLKGKTVVSTAGTTNIKQLTEANLARGLSVNIIPA 180 SFTN+HFLTASR+V KK+S ++ DDLKGKTVVST+GTTNI+Q+ E N A L + I+PA Sbjct: 120 SFTNTHFLTASRFVAKKSSNVSKFDDLKGKTVVSTSGTTNIRQINEYNAANKLGITILPA 179 Query: 181 KDHAEAFLMVETDRAVAFVMDDILLASLVAGSKSPDDYVISKDAFSKPEPYGIMLRKDDA 240 KDHAEAFLMVET RAVAFVMDD+LLASL A SK PD Y+IS DA SKPEPYGIMLRKDDA Sbjct: 180 KDHAEAFLMVETGRAVAFVMDDVLLASLAASSKEPDAYLISTDAISKPEPYGIMLRKDDA 239 Query: 241 PFKKVVDAATAALYTSAEGQKIYDKWFTQKIPPKGLNLNVPLGPEMKKQLAKPSDSPDPD 300 PFKKVVD ATAA Y S EG YDKWFT+ IPP+ +NLN+P+ +KK AKPSDSPDP Sbjct: 240 PFKKVVDDATAAFYQSPEGPATYDKWFTKPIPPRNINLNLPMDAALKKAFAKPSDSPDPA 299 Query: 301 AY 302 Y Sbjct: 300 MY 301