BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0027.0004.p         (138 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_02190053.1| hypothetical protein BAL199_29972 [alpha prot...   103   7e-21
ref|YP_004125023.1| hypothetical protein Alide_0358 [Alicycliphi...    92   2e-17
ref|ZP_06689823.1| conserved hypothetical protein [Achromobacter...    86   1e-15
ref|ZP_01058074.1| hypothetical protein MED193_00120 [Roseobacte...    84   8e-15
ref|YP_003979223.1| hypothetical protein AXYL_03188 [Achromobact...    84   8e-15

>ref|ZP_02190053.1| hypothetical protein BAL199_29972 [alpha proteobacterium BAL199]
 gb|EDP63090.1| hypothetical protein BAL199_29972 [alpha proteobacterium BAL199]
          Length = 130

 Score =  103 bits (258), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 71/126 (56%)

Query: 10  DAVTRAFAGLPALLDEAPRLVARGRLLDCDCLIGPMARPFHAAIRAGRIVELAPSPALMR 69
           D V    A LP L++    LV RGR    + L+     P H  +  GRI  +   P  MR
Sbjct: 4   DQVAAVLARLPELVNRREPLVRRGRFFSGEFLVEADGVPVHVKVHEGRIETVEKGPFRMR 63

Query: 70  SWRFSYRATPQAWSAYWQAEPKPGWHDLLALTKRGEAVLEGDLHPFMAHLQYFKDLLALP 129
           +WRF+ RA   AW  +W+  P PG+HD++A+ + G A LEGDL P MA+L+Y K++LA P
Sbjct: 64  AWRFAIRAEADAWLRFWEPVPAPGYHDVIAMGRLGVARLEGDLQPLMANLRYIKEVLASP 123

Query: 130 RQHFAA 135
           R    A
Sbjct: 124 RGTVGA 129


>ref|YP_004125023.1| hypothetical protein Alide_0358 [Alicycliphilus denitrificans BC]
 ref|YP_004386247.1| hypothetical protein Alide2_0303 [Alicycliphilus denitrificans
           K601]
 gb|ADU98135.1| hypothetical protein Alide_0358 [Alicycliphilus denitrificans BC]
 gb|AEB82731.1| hypothetical protein Alide2_0303 [Alicycliphilus denitrificans
           K601]
          Length = 134

 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 64/128 (50%)

Query: 4   SPDATDDAVTRAFAGLPALLDEAPRLVARGRLLDCDCLIGPMARPFHAAIRAGRIVELAP 63
           S   T  ++   FA L   ++    LV RGR L  D +I      F   I  G +VE+  
Sbjct: 2   SSHTTHTSLAERFASLAPHVNANACLVHRGRALTADLVIVVGTARFLLRIHQGEVVEVTQ 61

Query: 64  SPALMRSWRFSYRATPQAWSAYWQAEPKPGWHDLLALTKRGEAVLEGDLHPFMAHLQYFK 123
             AL        + T +AW   W+  P PGWHDL AL KRGE V+EGD     +HLQY K
Sbjct: 62  RFALFHPCALFVQGTAKAWERLWEKVPPPGWHDLFALHKRGEMVIEGDTRLLFSHLQYLK 121

Query: 124 DLLALPRQ 131
           D+L +PR 
Sbjct: 122 DVLEMPRH 129


>ref|ZP_06689823.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gb|EFF73250.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 128

 Score = 86.3 bits (212), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 68/114 (59%)

Query: 23  LDEAPRLVARGRLLDCDCLIGPMARPFHAAIRAGRIVELAPSPALMRSWRFSYRATPQAW 82
           ++   RLV RGR L+   L+   A  +   + AGRI  +   P +M  W+F+ RA+ + W
Sbjct: 15  VNRQERLVWRGRHLNTVFLLERGADAYLITVAAGRIQPVRKGPFVMPRWQFALRASAEDW 74

Query: 83  SAYWQAEPKPGWHDLLALTKRGEAVLEGDLHPFMAHLQYFKDLLALPRQHFAAA 136
           + +W   P PG+HDL+AL K      EGDL+P M++L YFKD+LA PR   A++
Sbjct: 75  AQFWLPLPPPGFHDLMALVKFRRLRAEGDLYPLMSNLLYFKDVLACPRAEGASS 128


>ref|ZP_01058074.1| hypothetical protein MED193_00120 [Roseobacter sp. MED193]
 gb|EAQ43896.1| hypothetical protein MED193_00120 [Roseobacter sp. MED193]
          Length = 133

 Score = 84.0 bits (206), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 62/125 (49%)

Query: 6   DATDDAVTRAFAGLPALLDEAPRLVARGRLLDCDCLIGPMARPFHAAIRAGRIVELAPSP 65
           +A +  V   F  +   L+  P L   GRL     LI      ++     G IV +   P
Sbjct: 2   NAWETKVINTFKQIQTRLEATPHLQRLGRLFSETVLIEIDGNEYYLTFEKGHIVSVVEGP 61

Query: 66  ALMRSWRFSYRATPQAWSAYWQAEPKPGWHDLLALTKRGEAVLEGDLHPFMAHLQYFKDL 125
           +    WRF+ R   +A   +WQA P+PG+HD+  L K G   ++GD+   + +L++FK++
Sbjct: 62  SRKTPWRFALRTDAEALDKFWQARPEPGFHDIFGLVKIGRGRIDGDILSLVKNLRFFKEV 121

Query: 126 LALPR 130
           L L R
Sbjct: 122 LGLAR 126


>ref|YP_003979223.1| hypothetical protein AXYL_03188 [Achromobacter xylosoxidans A8]
 gb|ADP16508.1| hypothetical protein AXYL_03188 [Achromobacter xylosoxidans A8]
          Length = 128

 Score = 83.6 bits (205), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 3/122 (2%)

Query: 9   DDAVTRAFAGLPALLDEAPRLVARGRLLDCDCLIGPMARPFHAAIRAGRIVELAPSPALM 68
           DD +    AG    ++   RLV RGR L+   L+          +  GRI ++   P +M
Sbjct: 4   DDFILHRLAGA---VNARERLVWRGRHLNTVFLLESGDTAHLITVGRGRIEQVRRGPFVM 60

Query: 69  RSWRFSYRATPQAWSAYWQAEPKPGWHDLLALTKRGEAVLEGDLHPFMAHLQYFKDLLAL 128
             W F+ RA  + W+ YW   P PG+HDL+A+ K      EGDL+PFM++L YFK++LA 
Sbjct: 61  PRWDFALRAQAEDWARYWMPRPAPGFHDLMAMIKFRRLRAEGDLYPFMSNLLYFKEVLAC 120

Query: 129 PR 130
           PR
Sbjct: 121 PR 122