BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0035.p (394 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772419.1| hypothetical protein blr5779 [Bradyrhizobium ja... 493 e-137 ref|YP_001241336.1| hypothetical protein BBta_5467 [Bradyrhizobi... 459 e-127 ref|YP_317886.1| hypothetical protein Nwi_1273 [Nitrobacter wino... 455 e-126 ref|YP_576803.1| hypothetical protein Nham_1521 [Nitrobacter ham... 454 e-126 ref|YP_001206914.1| putative Acyl-CoA N-acyltransferase [Bradyrh... 454 e-125 >ref|NP_772419.1| hypothetical protein blr5779 [Bradyrhizobium japonicum USDA 110] dbj|BAC51044.1| blr5779 [Bradyrhizobium japonicum USDA 110] Length = 389 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 250/389 (64%), Positives = 300/389 (77%), Gaps = 1/389 (0%) Query: 1 VADIADQAMIHRASRRDATDDRTLPPLSAAPLNAWRALAARAIEANGYYQADWELAVDAS 60 + DIA QA I+ AS + AT R L PL A WRALA RA+E NGYY WELAV A+ Sbjct: 1 MVDIAHQAAINPASAKHATTTRALVPLDAIEAGQWRALAQRAVEPNGYYLPAWELAVSAT 60 Query: 61 ARGRTGASLLSAA-GDGGQLIGLLPVVPMRRIYRIPLPALVGAEPYGTLCTPLLDRAAAE 119 ARGRTGAS L A G +LIGL+PV+ + R ++IPLPALV A PYGTLC+PL+DR A Sbjct: 61 ARGRTGASALPALDGYSTRLIGLMPVISLWRAWKIPLPALVSAHPYGTLCSPLIDRDAPI 120 Query: 120 EAAGKMLRQARNAGAHALILRNMSLEGPAMAAIRAVLARDGLQPQILSAYQRAQLDATRD 179 EAA ++L+QAR GAHA +L +++L+G AMA+++ L RDGL+P++LS+Y RA LDAT+D Sbjct: 121 EAATRLLQQARETGAHAFVLNDVALDGAAMASLKQALNRDGLKPRVLSSYIRASLDATQD 180 Query: 180 ADELLRDALGPKKLKELRRQHHRLSDHGTVRFDVARTPHEVATALETFLVLEAGGWKGER 239 + LLR+ALG +KLKELRRQ HRL +HG V F+VAR P E+ ALETFL LEA GWKG+R Sbjct: 181 GETLLREALGARKLKELRRQRHRLEEHGPVVFEVARRPDEIGPALETFLQLEASGWKGKR 240 Query: 240 GTALSQHAGDAAFIRRATSTMAEAGRCEIITLHAGDTPVAGGIVVRHQDRAFFFKIGVDE 299 GTAL QHAGDA FIRRA +AE +CEI+TL AG PVA GIV+RHQDRAFFFK+G+DE Sbjct: 241 GTALIQHAGDATFIRRAVPALAETAQCEIVTLRAGTIPVAAGIVLRHQDRAFFFKLGIDE 300 Query: 300 RFAKYSPGTQLTLELTRHLCADPAIKSADSTAAPGHPMIDPIWRGRFAIGDVLIPLRRRD 359 RFA+YSPG QLTL+LTR LCADPAI SADSTA+ HPMI+PIWRGRFAIGDVLIPLRR D Sbjct: 301 RFARYSPGVQLTLDLTRRLCADPAIASADSTASADHPMINPIWRGRFAIGDVLIPLRRND 360 Query: 360 PLVPAIHAALTLNKFAYEAARGAVRFIRS 388 P+VP +HAAL A+EA R VR +R Sbjct: 361 PVVPLVHAALVGLNAAHEATRRVVRRLRK 389 >ref|YP_001241336.1| hypothetical protein BBta_5467 [Bradyrhizobium sp. BTAi1] gb|ABQ37430.1| hypothetical protein BBta_5467 [Bradyrhizobium sp. BTAi1] Length = 411 Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust. Identities = 238/371 (64%), Positives = 279/371 (75%), Gaps = 3/371 (0%) Query: 22 RTLPPLSAAPLNAWRALAARAIEANGYYQADWELAVDASARGRTGASLLSAAGDG--GQL 79 R LP S AP AWR LAARA+E NGYY WELAV+ASARGRTG S L A+ + L Sbjct: 31 RPLPLDSVAP-QAWRDLAARALEPNGYYLPGWELAVNASARGRTGTSALCASDEAQPSSL 89 Query: 80 IGLLPVVPMRRIYRIPLPALVGAEPYGTLCTPLLDRAAAEEAAGKMLRQARNAGAHALIL 139 GL+PV + + ++PLPAL PYGTLCTPLLDR AE AA ++L +AR GA A++L Sbjct: 90 AGLMPVTSLWKACKLPLPALASGHPYGTLCTPLLDREHAEPAAARLLDEARRTGARAILL 149 Query: 140 RNMSLEGPAMAAIRAVLARDGLQPQILSAYQRAQLDATRDADELLRDALGPKKLKELRRQ 199 R+MS+ GP M A L RDGL P+IL +Y+RA LDAT + +++L+DALGPKKLKELRRQ Sbjct: 150 RDMSIAGPVMQAFTTALRRDGLSPRILQSYERACLDATGNGEKVLQDALGPKKLKELRRQ 209 Query: 200 HHRLSDHGTVRFDVARTPHEVATALETFLVLEAGGWKGERGTALSQHAGDAAFIRRATST 259 HRL++HG VRF+VAR+ E+A ALETFL LEA GWKG RGTAL QH GDAAFIRRA S Sbjct: 210 RHRLAEHGPVRFEVARSAGEIAPALETFLRLEASGWKGRRGTALVQHDGDAAFIRRAASA 269 Query: 260 MAEAGRCEIITLHAGDTPVAGGIVVRHQDRAFFFKIGVDERFAKYSPGTQLTLELTRHLC 319 +A+ G CEII+L AGDT VA GIV+RH RAFFFK+GVDE FA+YSPG QLTL+LTRHLC Sbjct: 270 LAQDGDCEIISLVAGDTTVAAGIVLRHAHRAFFFKLGVDEHFARYSPGVQLTLDLTRHLC 329 Query: 320 ADPAIKSADSTAAPGHPMIDPIWRGRFAIGDVLIPLRRRDPLVPAIHAALTLNKFAYEAA 379 +DPAI SADSTA P HPMI+PIWRGR AIGDVLIPL RRDP+ IHAAL L + AA Sbjct: 330 SDPAINSADSTAGPDHPMINPIWRGRLAIGDVLIPLYRRDPVAEIIHAALVLRRGGLAAA 389 Query: 380 RGAVRFIRSRR 390 R V +R R Sbjct: 390 RRTVHALRGSR 400 >ref|YP_317886.1| hypothetical protein Nwi_1273 [Nitrobacter winogradskyi Nb-255] gb|ABA04534.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 406 Score = 455 bits (1170), Expect = e-126, Method: Compositional matrix adjust. Identities = 241/367 (65%), Positives = 277/367 (75%), Gaps = 7/367 (1%) Query: 33 NAWRALAARAIEANGYYQADWELAVDASARGRTGASLLSAAGDGGQ-------LIGLLPV 85 + WR+LA RA+E NGYY ADWELA+DA+ARGRT AS L+A D LIGL+P Sbjct: 38 DQWRSLADRAVEPNGYYLADWELALDATARGRTHASALTARSDFSSGETGAETLIGLIPA 97 Query: 86 VPMRRIYRIPLPALVGAEPYGTLCTPLLDRAAAEEAAGKMLRQARNAGAHALILRNMSLE 145 + R YRIPLP LV A+PYGTLCTPLLDR ++AA +LR+AR G ALILRN++L+ Sbjct: 98 ISAWRAYRIPLPLLVSADPYGTLCTPLLDRDRTDQAAATLLREARALGQRALILRNVTLD 157 Query: 146 GPAMAAIRAVLARDGLQPQILSAYQRAQLDATRDADELLRDALGPKKLKELRRQHHRLSD 205 G A+ A A L DGLQP L + RA LDATRD +ELLR+ALG KKLKELRRQ +RL++ Sbjct: 158 GAAVKAFTAALEPDGLQPHRLHGHARACLDATRDPEELLREALGAKKLKELRRQRNRLAE 217 Query: 206 HGTVRFDVARTPHEVATALETFLVLEAGGWKGERGTALSQHAGDAAFIRRATSTMAEAGR 265 HG V F VAR EVATALETFL LEA GWK +RGTAL QH GDAAFIRRA +AE G+ Sbjct: 218 HGEVSFQVARAAAEVATALETFLALEASGWKAQRGTALIQHDGDAAFIRRAAPALAERGQ 277 Query: 266 CEIITLHAGDTPVAGGIVVRHQDRAFFFKIGVDERFAKYSPGTQLTLELTRHLCADPAIK 325 CEI+TL AG TPVA IV+RHQDRAF+FK+GVDERFAK+SPG QLTL+LTRHLCADPAI Sbjct: 278 CEIVTLRAGPTPVAAAIVLRHQDRAFYFKLGVDERFAKFSPGVQLTLDLTRHLCADPAIT 337 Query: 326 SADSTAAPGHPMIDPIWRGRFAIGDVLIPLRRRDPLVPAIHAALTLNKFAYEAARGAVRF 385 ADSTA PGHPMIDPIWRGR IGDVLIPLRRRDP+V AA+TL K E R AV Sbjct: 338 MADSTADPGHPMIDPIWRGRLVIGDVLIPLRRRDPVVSLARAAITLRKLVREPMRRAVHI 397 Query: 386 IRSRRGK 392 +R R+ K Sbjct: 398 LRERQEK 404 >ref|YP_576803.1| hypothetical protein Nham_1521 [Nitrobacter hamburgensis X14] gb|ABE62343.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 407 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 238/372 (63%), Positives = 276/372 (74%), Gaps = 6/372 (1%) Query: 27 LSAAPLNAWRALAARAIEANGYYQADWELAVDASARGRTGASLLSA------AGDGGQLI 80 L++ ++ WR LA RA+E N Y+ ADW+L +DASAR RT AS L+A A G LI Sbjct: 34 LASIDIDQWRTLADRAVEPNAYHLADWQLPLDASARDRTDASALTAHDGSSAASGAGALI 93 Query: 81 GLLPVVPMRRIYRIPLPALVGAEPYGTLCTPLLDRAAAEEAAGKMLRQARNAGAHALILR 140 GL+PV+ R YR+PLP LV A+PYGTLCTPLLDR A EAA +LR+AR G ALILR Sbjct: 94 GLIPVISAWRAYRLPLPVLVSADPYGTLCTPLLDRGLANEAATTLLREARAIGQRALILR 153 Query: 141 NMSLEGPAMAAIRAVLARDGLQPQILSAYQRAQLDATRDADELLRDALGPKKLKELRRQH 200 N++L+G AM A+ A L DG++P L + RA LDATR+ DELLRDALG KKLKELRRQ Sbjct: 154 NVALDGAAMKALTAALEHDGIRPHTLHGHVRACLDATREPDELLRDALGVKKLKELRRQR 213 Query: 201 HRLSDHGTVRFDVARTPHEVATALETFLVLEAGGWKGERGTALSQHAGDAAFIRRATSTM 260 +RL+DHG V F VAR P +VA ALETFL LEA GWK GTAL QH GDAAFIRRA + Sbjct: 214 NRLADHGEVSFQVARAPGDVAQALETFLALEASGWKARCGTALLQHGGDAAFIRRAAPAL 273 Query: 261 AEAGRCEIITLHAGDTPVAGGIVVRHQDRAFFFKIGVDERFAKYSPGTQLTLELTRHLCA 320 AE +CEI+TL AG TPVA IV+RHQDRAF+FK+GVDE FAK+SPG QLTL+LTRHLCA Sbjct: 274 AERDQCEIVTLRAGPTPVAAAIVLRHQDRAFYFKLGVDENFAKFSPGVQLTLDLTRHLCA 333 Query: 321 DPAIKSADSTAAPGHPMIDPIWRGRFAIGDVLIPLRRRDPLVPAIHAALTLNKFAYEAAR 380 DPAI ADSTA PGHPMIDPIWRGR AIGDVLIPLRRRDP +P AA+ L + A A Sbjct: 334 DPAITLADSTANPGHPMIDPIWRGRLAIGDVLIPLRRRDPAIPLARAAVALRRLARVAVH 393 Query: 381 GAVRFIRSRRGK 392 AV IR RR + Sbjct: 394 RAVHVIRKRRER 405 >ref|YP_001206914.1| putative Acyl-CoA N-acyltransferase [Bradyrhizobium sp. ORS 278] emb|CAL78697.1| conserved hypothetical protein; putative Acyl-CoA N-acyltransferase [Bradyrhizobium sp. ORS 278] Length = 420 Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust. Identities = 244/398 (61%), Positives = 279/398 (70%), Gaps = 6/398 (1%) Query: 1 VADIADQAMIHR---ASRRD-ATDDRTLPPLSAAPLNAWRALAARAIEANGYYQADWELA 56 VADI D + H A RR + L PL A AWR LA R +E NGYY DWE A Sbjct: 14 VADIVDHTIAHASPAAGRRGLSASSPALVPLDAVTETAWRQLAGRVLEPNGYYLPDWESA 73 Query: 57 VDASARGRTGASLLSAAGD--GGQLIGLLPVVPMRRIYRIPLPALVGAEPYGTLCTPLLD 114 V+ASARGRTGAS L A D +LIGL+PV + R R+PLP L PYGTLCTPLLD Sbjct: 74 VNASARGRTGASALCAWSDDPSSRLIGLMPVTSLWRACRLPLPVLASGHPYGTLCTPLLD 133 Query: 115 RAAAEEAAGKMLRQARNAGAHALILRNMSLEGPAMAAIRAVLARDGLQPQILSAYQRAQL 174 +AE AA ++L AR AGA AL+LR+MS+EGP M A VL R L+ ++L Y+RA L Sbjct: 134 ADSAEPAAFRLLDTARRAGARALLLRDMSVEGPVMQAFDTVLRRQRLRSRVLQCYERALL 193 Query: 175 DATRDADELLRDALGPKKLKELRRQHHRLSDHGTVRFDVARTPHEVATALETFLVLEAGG 234 DAT D + +L D LG KKLKELRRQ HRL++HG VR +AR P EVA ALETFL LEA G Sbjct: 194 DATVDGETVLHDGLGAKKLKELRRQRHRLAEHGAVRVAIARAPGEVAAALETFLALEASG 253 Query: 235 WKGERGTALSQHAGDAAFIRRATSTMAEAGRCEIITLHAGDTPVAGGIVVRHQDRAFFFK 294 WKG RGTAL QH GDAAFIRRA T+A G CEII+ AG+T VA G+V+RHQDRAFFFK Sbjct: 254 WKGRRGTALIQHDGDAAFIRRAAPTLAYHGACEIISFFAGETAVAAGLVLRHQDRAFFFK 313 Query: 295 IGVDERFAKYSPGTQLTLELTRHLCADPAIKSADSTAAPGHPMIDPIWRGRFAIGDVLIP 354 +GVDERFAKYSPG QLTLELTRHLC DP I SADSTA P HPMI+PIWRGR +IGDVLIP Sbjct: 314 LGVDERFAKYSPGVQLTLELTRHLCNDPTISSADSTAGPDHPMINPIWRGRLSIGDVLIP 373 Query: 355 LRRRDPLVPAIHAALTLNKFAYEAARGAVRFIRSRRGK 392 L RDP V +HAAL + A AR +V IR R + Sbjct: 374 LYDRDPAVEIVHAALIARREAQALARRSVHTIRGWRKR 411