BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0034.p         (150 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772408.1| hypothetical protein blr5768 [Bradyrhizobium ja...   116   1e-24
ref|YP_001206912.1| hypothetical protein BRADO4996 [Bradyrhizobi...    88   5e-16
ref|YP_001241334.1| hypothetical protein BBta_5465 [Bradyrhizobi...    81   4e-14
ref|YP_485143.1| hypothetical protein RPB_1522 [Rhodopseudomonas...    75   4e-12
ref|YP_568601.1| hypothetical protein RPD_1463 [Rhodopseudomonas...    73   1e-11

>ref|NP_772408.1| hypothetical protein blr5768 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51033.1| blr5768 [Bradyrhizobium japonicum USDA 110]
          Length = 167

 Score =  116 bits (290), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/115 (54%), Positives = 76/115 (66%)

Query: 22  CGLADSHAVWPEALKVKATEPAPLETPPDVKRLVAGKLDSVFTTGSQPTHVRVSAPLHDP 81
           CG ADS A  PE +++K TE  P E PPDVKR+V  ++D VF   S P  V V+ P  + 
Sbjct: 53  CGFADSRAPVPEFMRMKETEQPPPEPPPDVKRVVREQIDVVFVNTSYPREVHVAPPHREV 112

Query: 82  RGTGWTACVRAELTSVIGKPLGTQTYRVFINDGAIFDRRQVEADDNCVTQNYEPI 136
           RG GWTACVRA+LTS  G  LG QTY V I+ G + DRR+ EADD C T+ YEPI
Sbjct: 113 RGPGWTACVRAQLTSATGSALGAQTYIVTISGGKVVDRRRAEADDICGTETYEPI 167


>ref|YP_001206912.1| hypothetical protein BRADO4996 [Bradyrhizobium sp. ORS 278]
 emb|CAL78695.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 175

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/122 (45%), Positives = 73/122 (59%), Gaps = 1/122 (0%)

Query: 15  AAFILSGCGLADSHAVWPEALKVKATEPAPLETPPDVKRLVAGKLDSVFTTGSQPTHVRV 74
           AA +LSGC  ADS +  P  ++V+  EP P E PPDV  LV   LD +F   S P  +  
Sbjct: 51  AALLLSGCA-ADSQSRLPAFMRVRDPEPPPPEAPPDVALLVRKNLDMIFVATSLPRDLEA 109

Query: 75  SAPLHDPRGTGWTACVRAELTSVIGKPLGTQTYRVFINDGAIFDRRQVEADDNCVTQNYE 134
           ++     RG  WTACVRA++ SV G PL  QTY++ I    I DRR+  A D+CV+++Y 
Sbjct: 110 TSARRTDRGDAWTACVRAQIVSVAGAPLRNQTYKLTIRQNEIIDRRRAMAGDDCVSEDYR 169

Query: 135 PI 136
           PI
Sbjct: 170 PI 171


>ref|YP_001241334.1| hypothetical protein BBta_5465 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37428.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 129

 Score = 81.3 bits (199), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 63/114 (55%)

Query: 26  DSHAVWPEALKVKATEPAPLETPPDVKRLVAGKLDSVFTTGSQPTHVRVSAPLHDPRGTG 85
           DSH+  P  ++ K   P+P E+PPDV  LV   LD +F   +QP  +  S          
Sbjct: 15  DSHSSLPAFMRAKEAAPSPPESPPDVPLLVRKNLDMIFVATTQPRELEASIARRADESDA 74

Query: 86  WTACVRAELTSVIGKPLGTQTYRVFINDGAIFDRRQVEADDNCVTQNYEPIESS 139
           WTACVRA++ S  G PL  QTYR+ I    I DRR+  + D+C++Q Y  + +S
Sbjct: 75  WTACVRAQIISASGAPLRRQTYRLTIKQNEIIDRRRAGSGDDCMSQKYNAVLAS 128


>ref|YP_485143.1| hypothetical protein RPB_1522 [Rhodopseudomonas palustris HaA2]
 gb|ABD06232.1| hypothetical protein RPB_1522 [Rhodopseudomonas palustris HaA2]
          Length = 132

 Score = 74.7 bits (182), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 6   VHLAALLAGAAFILSGCGLADSHAVWPEALKVKATEPAPLETPPDVKRLVAGKLDSVFTT 65
           V L  LL  AA +L GC + D+H  +      +     P+  PPDV  ++ G + +VF  
Sbjct: 5   VRLIPLLFSAA-VLGGCAV-DAHINYVPDFMKQPVPSQPVNLPPDVGEILKGNVAAVFAQ 62

Query: 66  GSQPTHVRVSAPLHDPRGTGWTACVRAELTSVIGKPLGTQTYRVFINDGAIFDRRQVEAD 125
           G+ PT +  S+P+    G GW  CV+ ++  V GKPLG Q + V I+   I  R +V  D
Sbjct: 63  GASPTAISYSSPVPGKFG-GWDTCVQGDVVGVTGKPLGVQLFLVNIDRDRIGRRERVGDD 121

Query: 126 DNCVTQNYEPI 136
             C TQ ++ +
Sbjct: 122 HWCATQVFKSL 132


>ref|YP_568601.1| hypothetical protein RPD_1463 [Rhodopseudomonas palustris BisB5]
 gb|ABE38700.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 133

 Score = 73.2 bits (178), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 19  LSGCGLADSHAVWPEALKVKATEPAPLETPPDVKRLVAGKLDSVFTTGSQPTHVRVSAPL 78
           L GC +  + +  P+ +K         ETPPDV   +   +++VF  G+ PT +R S P+
Sbjct: 17  LCGCAVDANFSYAPDFMKQAGPRQPVAETPPDVGGFLRTNVNAVFAQGASPTGIRFSPPV 76

Query: 79  HDPRGTGWTACVRAELTSVIGKPLGTQTYRVFINDGAIFDRRQVEADDNCVTQNYEPI 136
               G GW  CV+ ++  V G+ LG QT+ V I+   +  R +V  +  C  Q Y P+
Sbjct: 77  ASKYG-GWDTCVKGDVVGVTGQSLGGQTFLVTIDQDRVGRRERVGTEHWCARQTYTPL 133