BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0030.p (404 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04959038.1| quinoprotein glucose dehydrogenase-A [gamma p... 226 8e-57 ref|ZP_05095600.1| PQQ enzyme repeat domain protein [marine gamm... 222 1e-55 ref|YP_001413858.1| quinoprotein glucose dehydrogenase [Parvibac... 220 4e-55 ref|YP_001261558.1| quinoprotein glucose dehydrogenase [Sphingom... 188 2e-45 ref|YP_002825284.1| glucose dehydrogenase (pyrroloquinoline-quin... 184 2e-44 >ref|ZP_04959038.1| quinoprotein glucose dehydrogenase-A [gamma proteobacterium NOR51-B] gb|EED36622.1| quinoprotein glucose dehydrogenase-A [gamma proteobacterium NOR51-B] Length = 654 Score = 226 bits (575), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 145/403 (35%), Positives = 185/403 (45%), Gaps = 94/403 (23%) Query: 14 CAQPARAWEYWGGDRGGQRFSPLTQITSDNVGTLLRGWEFRTGDLDTRPPEVMKRTKFEV 73 A W WG GG R+ +IT +NV L W + TG+L R E+++ + E Sbjct: 26 TAHTLSEWSDWGATPGGTRYVSSDEITPENVEQLTVAWRYSTGELQRRSSEMLQNSSSET 85 Query: 74 TPLFVEDSLIFCTPFNEVIALDPGTGAQKWRFDPKISMAQRPANRFVCRGVAHWTDDR-- 131 TP+ S+I CTPF VIALDP TGA++W FDPKI N++VCRGV+ W D Sbjct: 86 TPILAAGSIITCTPFGRVIALDPLTGAERWAFDPKIDATFELPNQYVCRGVSQWIDQEAP 145 Query: 132 ----------------------AAEGAACKSRIFTG---------------------TND 148 A GAAC+S G T Sbjct: 146 SESACAHRIVYATVDLRLIAIDAHTGAACESFGNGGQVAIDVPNQQHNGEVKLASPPTVT 205 Query: 149 RRLIAL--------------------DARTGKPCADFGNAGEIRIDAGMKLEWPGEFXSM 188 +IA+ DARTG+P F I D+G P + + Sbjct: 206 NNVIAVGSMILDNVRANAPRGVVYGFDARTGQPAWTFD---PIPQDSG-----PTDSDWL 257 Query: 189 RGPASRAGA-------SIRSCTXFFFFP--------------GNDEHANSVVALRIETGE 227 G R GA S F P G++ + NS+VAL+ TGE Sbjct: 258 EGSRHRTGAANMWSVMSSDEALDLLFIPTSSPAPDYYGGERPGDNRYGNSLVALKASTGE 317 Query: 228 LAWAFQTVHHDVWDYDLPAQPTLARIDTGDGRRDVVIQPTKQGFVFVLDRGTGKPVWPVE 287 + W+FQ VHHDVWDYD PAQPTL ID V+Q TK GF+FV DR TG+P++P+E Sbjct: 318 VVWSFQLVHHDVWDYDTPAQPTLMTIDKNGMAIPAVVQTTKHGFIFVFDRRTGEPLFPIE 377 Query: 288 ERAVPQNGAEGERLSPTQPFPTHVPPLLTQRMTADDVAGLLFF 330 ER+VPQNG GE+LS TQP PT PL +T DD G F+ Sbjct: 378 ERSVPQNGVPGEQLSKTQPIPTLPEPLFHTNLTPDDAWGFTFW 420 >ref|ZP_05095600.1| PQQ enzyme repeat domain protein [marine gamma proteobacterium HTCC2148] gb|EEB78032.1| PQQ enzyme repeat domain protein [marine gamma proteobacterium HTCC2148] Length = 632 Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 141/381 (37%), Positives = 190/381 (49%), Gaps = 77/381 (20%) Query: 18 ARAWEYWGGDRGGQRFSPLTQITSDNVGTLLRGWEFRTGDLDTRPPEVMKRTKFEVTPLF 77 A+ W ++GG+ GG +S QI +NV L W R+GD P ++++T + TP+ Sbjct: 18 AQGWPFYGGNSGGTHYSAAAQIDRNNVDQLEVAWIHRSGD-SKLPDHLLQKTSGQSTPIL 76 Query: 78 VED----SLIFCTPFNEVIALDPGTGAQKWRFDPKISM-AQRPANRFVCRGVAHWTDDRA 132 + SL++C+ N+V+ALDPG+GAQ+W DPKI++ +RP CRGV+++ + R Sbjct: 77 LPPEAGASLVYCSALNKVMALDPGSGAQRWAHDPKINVQTERP---LRCRGVSYYEEKRV 133 Query: 133 AEGAACKSRIFTGTNDRRLIALDARTGKPCADFGNAGEI--------------------- 171 G C+ RIFT T DRRLIALDA GK C DFGN GE+ Sbjct: 134 TPGEHCRHRIFTITYDRRLIALDALDGKRCKDFGNKGEVGQFGNDMSTDYISNSSPPVAA 193 Query: 172 --RIDAGM-----------------------KLEWPGEFXSMRGPASRAGA------SIR 200 I AG KL W F + G + GA SI Sbjct: 194 AGLIIAGSAVIDFHYAKAPRGTVQAFDSLTGKLTW--SFDPVAGLKNSGGANVWAPMSID 251 Query: 201 SCTXFFFFP--------------GNDEHANSVVALRIETGELAWAFQTVHHDVWDYDLPA 246 + P G++ +ANSVVAL +++GE+ W FQ V HD+WDYD PA Sbjct: 252 ENLNLLYLPTSAASPDYYGVNRPGDNGYANSVVALDLQSGEVRWHFQHVRHDLWDYDSPA 311 Query: 247 QPTLARIDTGDGRRDVVIQPTKQGFVFVLDRGTGKPVWPVEERAVPQNGAEGERLSPTQP 306 QP L + QPTKQGFVFVLDR TG+ +W + E+ VP + GE + TQP Sbjct: 312 QPILFDWKKNGASIPALAQPTKQGFVFVLDRRTGESLWEITEQPVPPSQIPGEMAATTQP 371 Query: 307 FPTHVPPLLTQRMTADDVAGL 327 P PPLL +T D GL Sbjct: 372 KPIAPPPLLDTFLTPDQAWGL 392 >ref|YP_001413858.1| quinoprotein glucose dehydrogenase [Parvibaculum lavamentivorans DS-1] gb|ABS64201.1| Quinoprotein glucose dehydrogenase [Parvibaculum lavamentivorans DS-1] Length = 639 Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 119/247 (48%), Positives = 145/247 (58%), Gaps = 10/247 (4%) Query: 1 MRSLFCLLAALLLCAQPARA--WEYWGGDRGGQRFSPLTQITSDNVGTLLRGWEFRTGDL 58 M L ++LL + PA+A W ++GGD GGQR S QIT NVG L W + TGDL Sbjct: 1 MTRFAFFLLSILLMSLPAQAAGWSHYGGDAGGQRHSASAQITPANVGNLAPAWTYSTGDL 60 Query: 59 DTRPPEVMKRTKFEVTPLFVEDSLIFCTPFNEVIALDPGTGAQKWRFDPKISMAQRPANR 118 R + MK + FE TP+ V SLIFC+PFNEVIALDPGTGA+KWR+DPK++ RP N+ Sbjct: 61 TARADD-MKSSAFEGTPVLVAGSLIFCSPFNEVIALDPGTGAEKWRYDPKVTTGYRPGNQ 119 Query: 119 FVCRGVAHWTDDRAAEGAACKSRIFTGTNDRRLIALDARTGKPCADFGNAGEIRIDAGMK 178 F+CRGV W D A EG C +R+F GT D RLIALDA TG+PC FG GE+RID GM Sbjct: 120 FICRGVTPWVDAAAGEGDLCATRLFMGTVDSRLIALDAGTGQPCLGFGMDGEVRIDPGMD 179 Query: 179 LEWPGEFXSMRGPASRAGASIRSCTXFFFFPGN---DEHANSVVALRIETGELAWAFQTV 235 L+WPGEF PA G + N D +V A TG+ W F V Sbjct: 180 LQWPGEFQITSPPAVADGVVVIGSA----ISDNRRVDAPKGTVRAFDARTGKPLWDFNPV 235 Query: 236 HHDVWDY 242 D+ Sbjct: 236 TRGAKDH 242 Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 111/272 (40%), Positives = 135/272 (49%), Gaps = 27/272 (9%) Query: 82 LIFCTPFNEVIALDPGTGAQ--------KWRFDPKISMAQRPANRFVCRGVAHWTDDRAA 133 L T + +IALD GTG + R DP + + Q P F D Sbjct: 143 LFMGTVDSRLIALDAGTGQPCLGFGMDGEVRIDPGMDL-QWP-GEFQITSPPAVADGVVV 200 Query: 134 EGAACKSRIFTGTNDRRLIALDARTGKPCADFGNAGEIRIDAGMKLEWPGEFXSMRGPAS 193 G+A + A DARTGKP DF R +WP G A+ Sbjct: 201 IGSAISDNRRVDAPKGTVRAFDARTGKPLWDFNPV--TRGAKDHPEDWPRGVAEHTGHAN 258 Query: 194 R-AGASIRSCTXFFFFP--------------GNDEHANSVVALRIETGELAWAFQTVHHD 238 A S FF P G++ +ANSVVAL TG++ W FQTVHHD Sbjct: 259 VWAPMSADETRGLFFLPTSSPSPDFFGGERSGDNRYANSVVALDARTGDVRWHFQTVHHD 318 Query: 239 VWDYDLPAQPTLARIDTGDGRRDVVIQPTKQGFVFVLDRGTGKPVWPVEERAVPQNGAEG 298 VWDYDLPAQP+L + D V+Q TK GFVFVLDR TGKP++ VEER VPQ GA G Sbjct: 319 VWDYDLPAQPSLVTLTREGKPLDAVVQVTKTGFVFVLDRDTGKPIFEVEERPVPQGGAAG 378 Query: 299 ERLSPTQPFPTHVPPLLTQRMTADDVAGLLFF 330 E LSPTQPFP PPL+ Q ++ DD GL ++ Sbjct: 379 EFLSPTQPFPVAPPPLVPQTLSPDDAWGLTYW 410 >ref|YP_001261558.1| quinoprotein glucose dehydrogenase [Sphingomonas wittichii RW1] gb|ABQ67420.1| Quinoprotein glucose dehydrogenase [Sphingomonas wittichii RW1] Length = 669 Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 139/388 (35%), Positives = 177/388 (45%), Gaps = 84/388 (21%) Query: 21 WEYWGGDRGGQRFSPLTQITSDNVGTLLRGWEFRTGDLDTRPPEVMKRTKFEVTPLFVED 80 W+ WG GG RF+P QIT NV L W + TG+L RP + + E TP+ Sbjct: 49 WDQWGATAGGTRFTPAAQITPGNVAHLRVAWRYSTGELARRPEGMQVNSTNETTPILAAG 108 Query: 81 SLIFCTPFNEVIALDPGT------------------------GAQKWR----FDP----- 107 SLI CTPF VIALDP T G +WR DP Sbjct: 109 SLITCTPFGRVIALDPATGREKWTYDAKVDRSFKLPDQYICRGVSQWRDARAADPAGMCA 168 Query: 108 -KISMAQ-------------RPANRF-------VCRGVAHWTDD--RAAEGAACKSRIFT 144 +I +A RP F V G H + AA A + RI Sbjct: 169 TRIILATVDMRVIALDARTGRPCAGFGEGGTVRVDPGKLHHVGEVKLAAPAAIVRDRIVI 228 Query: 145 GTN---------DRRLI-ALDARTGKPCADFGNAGEIRIDAGMKLEWPGEFXSMRGPAS- 193 GT+ R +I A DAR+G+ F I G +W G+ G A+ Sbjct: 229 GTSVLDNVRANAPRGIIRAFDARSGREIWTFD---PIPQQGGPDRDWMGDSRRTTGAANV 285 Query: 194 -----------RAGASIRSCTXFFFF---PGNDEHANSVVALRIETGELAWAFQTVHHDV 239 S + ++ PG++ HANSVVAL TG L WA Q +HHD+ Sbjct: 286 WSVISGDPELDMVYLPTSSASPDYYGGLRPGDNRHANSVVALDAATGRLVWARQLIHHDI 345 Query: 240 WDYDLPAQPTLARIDTGDGRRDVVIQPTKQGFVFVLDRGTGKPVWPVEERAVPQNGAEGE 299 WDYD+PAQPTL ID G R ++QPTKQG+VFV DR TG P++P++E VPQ G GE Sbjct: 346 WDYDIPAQPTLVDIDRGGRRIPALVQPTKQGYVFVFDRRTGAPLFPIDEVPVPQGGVPGE 405 Query: 300 RLSPTQPFPTHVPPLLTQRMTADDVAGL 327 LSPTQP P P++ Q++T D G Sbjct: 406 WLSPTQPRPRLPRPIVPQKITPDQAWGF 433 >ref|YP_002825284.1| glucose dehydrogenase (pyrroloquinoline-quinone) protein [Sinorhizobium fredii NGR234] gb|ACP24531.1| glucose dehydrogenase (pyrroloquinoline-quinone) protein [Sinorhizobium fredii NGR234] Length = 778 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 132/394 (33%), Positives = 188/394 (47%), Gaps = 87/394 (22%) Query: 17 PARAWEYWGGDRGGQRFSPLTQITSDNVGTLLRGWEFRTGDLDTRPPEVMKRTKFEVTPL 76 PA W ++G GQR+SPL QI +NV TL W++RTGD+ + PE + T ++VTPL Sbjct: 162 PAGEWHHYGRTLFGQRYSPLAQIHRENVATLEVAWQYRTGDV--KLPEDIGETTYQVTPL 219 Query: 77 FVEDSLIFCTPFNEVIALDPGTGAQKWRFDPKISMAQRPANRFVCRGVAHWTDDRAAEGA 136 V+D+L CTP N IALD TG +KW++D + ++ CRGV +W D AA G+ Sbjct: 220 KVKDTLFLCTPHNWAIALDAATGREKWKYDSNSGLNPDRQHQ-TCRGVTYWADPAAATGS 278 Query: 137 ACKSRIF-------------------TGTNDRRLIALD-----------ARTGKPCADFG 166 AC RI+ TG D+ ++ L+ T P A G Sbjct: 279 ACAERIYLPTSDARLIALDAANGTVCTGFADQGVLHLERGMRYNPAGYYYSTSPPVAVAG 338 Query: 167 N----------------AGEIR---IDAGMKL-EW------------PGEFXSMRGPASR 194 +G IR I G + W G+F + P S Sbjct: 339 KIIVGGAVNDNYSTQEQSGVIRAFDIKTGALIWNWDSGNPEQTAPLPAGQFYTTNSPNSW 398 Query: 195 AGASIRSCTXFFFFP-GN--------------DEHANSVVALRIETGELAWAFQTVHHDV 239 + +S+ + P GN +++++S+VAL I TG + W QTVHHD+ Sbjct: 399 SVSSVDEALGLIYVPLGNQVPDQLGMGRSAHVEKYSSSIVALDINTGAVRWVRQTVHHDL 458 Query: 240 WDYDLPAQPTLARIDTGDGR-RDVVIQPTKQGFVFVLDRGTGKPVWPVEERAVPQNGAEG 298 WD D+PAQP L I DG ++ PTKQG ++VLDR +G+P+ PVEE P Sbjct: 459 WDMDVPAQPVLLDITKEDGSVVPALVGPTKQGDLYVLDRRSGEPIIPVEEVPAPGGAIAE 518 Query: 299 ERLSPTQPFP--THVPPLLTQRMTADDVAGLLFF 330 + +PTQP T +PP L +R D+ G+ F Sbjct: 519 DFTAPTQPVSGLTFMPPPLRER----DMWGITMF 548