BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0020.p (491 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242973.1| putative amidase [Bradyrhizobium sp. BTAi1] ... 863 0.0 ref|YP_001203053.1| putative amidase [Bradyrhizobium sp. ORS 278... 842 0.0 ref|NP_773922.1| amidase AmiC [Bradyrhizobium japonicum USDA 110... 828 0.0 ref|YP_968577.1| amidase [Acidovorax citrulli AAC00-1] >gi|12058... 745 0.0 ref|ZP_06898399.1| amidase [Roseomonas cervicalis ATCC 49957] >g... 743 0.0 >ref|YP_001242973.1| putative amidase [Bradyrhizobium sp. BTAi1] gb|ABQ39067.1| putative amidase [Bradyrhizobium sp. BTAi1] Length = 491 Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/490 (84%), Positives = 440/490 (89%) Query: 1 MTLAMSWDEWTQHDGTALAGRVRSGELTPRELASQAASAVAKVDPALCGVVELFDDVIAD 60 MTL MSWDEW +HDG ALA RV+SGELT ELA QAA +AKVDP LCGVVE+F D I D Sbjct: 1 MTLVMSWDEWARHDGMALAARVKSGELTAAELARQAAEGIAKVDPKLCGVVEVFADAIED 60 Query: 61 PARDGADLDGPFAGLPFLMKDLGPTLKGRLQEMGSLMMRGNRAAADTFLTAKMRKAGLNL 120 P + GA+ GPFAGLPFLMKDLGPT+ GRLQE GSL MRGNR ADT LTAKMRKAGLNL Sbjct: 61 PIKAGANAQGPFAGLPFLMKDLGPTMAGRLQEQGSLFMRGNRPVADTHLTAKMRKAGLNL 120 Query: 121 IGRTTTPEFGVCSSAENPAVYVTRNPWNTDYTTCGSSAGSAAMVAAGAVPIAHATDGGGS 180 +GRTTTPEFGVCSSAENPAVYVTRNPWNTDYTTCGSSAGSAAMVAAG VPIAHATDGGGS Sbjct: 121 MGRTTTPEFGVCSSAENPAVYVTRNPWNTDYTTCGSSAGSAAMVAAGVVPIAHATDGGGS 180 Query: 181 IRIPAGVNGNIGLKVSRGVFSLSPHLSDLTGLVSIQGCQSRTVRDTAGFVDACRGPAPGE 240 IRIPAGVNGNIGLKVSRGVFS++PHLSDLTGLVSIQGCQSR+VRDTA FVD CRG APGE Sbjct: 181 IRIPAGVNGNIGLKVSRGVFSIAPHLSDLTGLVSIQGCQSRSVRDTAAFVDHCRGGAPGE 240 Query: 241 FMPFWTSPEPYAAMIARDPGRLRIALSHTWGDYRATPHIAAELERVGRFLEGLGHQVDYA 300 FMP+WT+PEPY +I RDPG+LRIALSH WGDYRATPHIAAELERVG+FLEGLGH V YA Sbjct: 241 FMPYWTTPEPYVELIKRDPGKLRIALSHQWGDYRATPHIAAELERVGKFLEGLGHHVGYA 300 Query: 301 LPAIDYREAFAAQTACYISNFAVVIGNMLAARGLERPPAELIEPINIRIWEHGRDFSFAD 360 LP +DYR AFAAQT CYISNFA+VI N+LA R LERPPA+LIEPINIRIWE GR SFA+ Sbjct: 301 LPDVDYRAAFAAQTTCYISNFAIVISNLLAQRKLERPPADLIEPINIRIWEAGRSTSFAE 360 Query: 361 RARMQAVFNTTARGFGAFFEDWDIILTPIAALPTPKVGTTEYLTISDNPSVLDWFGNLWR 420 RA MQAVFNTT+R FGAFFEDWDIILTPI ALPTPK+GTTEYLTISDNP VLDWF NLWR Sbjct: 361 RAAMQAVFNTTSRAFGAFFEDWDIILTPITALPTPKIGTTEYLTISDNPDVLDWFENLWR 420 Query: 421 NFAFTPLANLCGIPAISLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAIGGKWND 480 NFAFTPLANLCGIPA+SLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAI G+WN Sbjct: 421 NFAFTPLANLCGIPALSLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAIDGRWNA 480 Query: 481 GKTPAVHVTR 490 G TPAVHVT+ Sbjct: 481 GATPAVHVTK 490 >ref|YP_001203053.1| putative amidase [Bradyrhizobium sp. ORS 278] emb|CAL74816.1| putative amidase [Bradyrhizobium sp. ORS 278] Length = 491 Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust. Identities = 410/490 (83%), Positives = 441/490 (90%) Query: 1 MTLAMSWDEWTQHDGTALAGRVRSGELTPRELASQAASAVAKVDPALCGVVELFDDVIAD 60 MTLAMSWDEW +HDG ALA RVR+GELT ELA QAA +AKVDP L GVVE+F D + D Sbjct: 1 MTLAMSWDEWARHDGMALAARVRNGELTAAELAQQAAEGIAKVDPQLSGVVEVFADAVDD 60 Query: 61 PARDGADLDGPFAGLPFLMKDLGPTLKGRLQEMGSLMMRGNRAAADTFLTAKMRKAGLNL 120 P + GA+ DG FAGLPFLMKDLGPT+ GRLQE GSL MRGNR AADT LT KMR+AGLNL Sbjct: 61 PIKAGANADGSFAGLPFLMKDLGPTMAGRLQEQGSLYMRGNRPAADTHLTKKMRRAGLNL 120 Query: 121 IGRTTTPEFGVCSSAENPAVYVTRNPWNTDYTTCGSSAGSAAMVAAGAVPIAHATDGGGS 180 +GRTTTPEFGVCSSAENPAVYVTRNPW+TDYTTCGSSAGSAAMVAAG VPIAHATDGGGS Sbjct: 121 MGRTTTPEFGVCSSAENPAVYVTRNPWDTDYTTCGSSAGSAAMVAAGVVPIAHATDGGGS 180 Query: 181 IRIPAGVNGNIGLKVSRGVFSLSPHLSDLTGLVSIQGCQSRTVRDTAGFVDACRGPAPGE 240 IRIPAGVNGNIGLKVSRGVFS++PHLSDL+GLVSIQGCQSR+VRDTA FVD CRG APGE Sbjct: 181 IRIPAGVNGNIGLKVSRGVFSIAPHLSDLSGLVSIQGCQSRSVRDTAAFVDHCRGGAPGE 240 Query: 241 FMPFWTSPEPYAAMIARDPGRLRIALSHTWGDYRATPHIAAELERVGRFLEGLGHQVDYA 300 FMP+WT+PEPY +I RDPGRLRIALSH WGDYRATPHIA+EL+RVG+FLEGLGH V YA Sbjct: 241 FMPYWTAPEPYVELIKRDPGRLRIALSHQWGDYRATPHIASELQRVGKFLEGLGHHVGYA 300 Query: 301 LPAIDYREAFAAQTACYISNFAVVIGNMLAARGLERPPAELIEPINIRIWEHGRDFSFAD 360 LP +DYR AFAAQT CYISNFA+VI N+LA R LERPPAELIEPINIRIWE GR SFA+ Sbjct: 301 LPDVDYRAAFAAQTTCYISNFAMVINNLLAQRKLERPPAELIEPINIRIWEAGRGTSFAE 360 Query: 361 RARMQAVFNTTARGFGAFFEDWDIILTPIAALPTPKVGTTEYLTISDNPSVLDWFGNLWR 420 RA MQAVFNTT+R FGAFFE+WDIILTPI ALPTPK+GTTEYLTISDNP VLDWFGNLWR Sbjct: 361 RAAMQAVFNTTSRAFGAFFEEWDIILTPITALPTPKIGTTEYLTISDNPDVLDWFGNLWR 420 Query: 421 NFAFTPLANLCGIPAISLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAIGGKWND 480 NFAFTPLANLCGIPA+SLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAI G+WN Sbjct: 421 NFAFTPLANLCGIPAVSLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAIDGRWNG 480 Query: 481 GKTPAVHVTR 490 G TPAVHVT+ Sbjct: 481 GATPAVHVTK 490 >ref|NP_773922.1| amidase AmiC [Bradyrhizobium japonicum USDA 110] dbj|BAC52547.1| amiC [Bradyrhizobium japonicum USDA 110] Length = 485 Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust. Identities = 404/485 (83%), Positives = 442/485 (91%) Query: 5 MSWDEWTQHDGTALAGRVRSGELTPRELASQAASAVAKVDPALCGVVELFDDVIADPARD 64 MSW+EW QHDG LA RVR GELTP+ELA QAA+AVAKV+PAL GVVELF+DVIADPA+D Sbjct: 1 MSWNEWAQHDGVGLAARVRKGELTPKELARQAAAAVAKVNPALSGVVELFEDVIADPAKD 60 Query: 65 GADLDGPFAGLPFLMKDLGPTLKGRLQEMGSLMMRGNRAAADTFLTAKMRKAGLNLIGRT 124 GA+L GPFAGLPFLMKDLGPT+KGRLQEMGSL+MRGNRA+ADTFLT K R+AGLNLIGRT Sbjct: 61 GANLAGPFAGLPFLMKDLGPTMKGRLQEMGSLLMRGNRASADTFLTGKFRQAGLNLIGRT 120 Query: 125 TTPEFGVCSSAENPAVYVTRNPWNTDYTTCGSSAGSAAMVAAGAVPIAHATDGGGSIRIP 184 TTPEFGVCSSA+NPAVYVTRNPWNTDYTTCGSSAGSAAMVAAG VPIAHATDGGGSIRIP Sbjct: 121 TTPEFGVCSSADNPAVYVTRNPWNTDYTTCGSSAGSAAMVAAGVVPIAHATDGGGSIRIP 180 Query: 185 AGVNGNIGLKVSRGVFSLSPHLSDLTGLVSIQGCQSRTVRDTAGFVDACRGPAPGEFMPF 244 AGVNGNIGLKVSRGVFSL+PH+SDLTGLVSIQGCQSR+VRDTA FVD RGPAPGEFMPF Sbjct: 181 AGVNGNIGLKVSRGVFSLAPHMSDLTGLVSIQGCQSRSVRDTAAFVDHARGPAPGEFMPF 240 Query: 245 WTSPEPYAAMIARDPGRLRIALSHTWGDYRATPHIAAELERVGRFLEGLGHQVDYALPAI 304 WT+ +PY+ MI RDPG+LRIALSHTWGDY ATP IAAELE+ GRFLEGLGH VDYALP + Sbjct: 241 WTTAQPYSEMIKRDPGKLRIALSHTWGDYTATPEIAAELEKTGRFLEGLGHHVDYALPEL 300 Query: 305 DYREAFAAQTACYISNFAVVIGNMLAARGLERPPAELIEPINIRIWEHGRDFSFADRARM 364 D+R AF AQT CYISNFAVVI NMLAARGL++PP +LIEP+NIRIWE GR SFA+RA+M Sbjct: 301 DFRAAFEAQTMCYISNFAVVISNMLAARGLDKPPEDLIEPMNIRIWEAGRHTSFAERAKM 360 Query: 365 QAVFNTTARGFGAFFEDWDIILTPIAALPTPKVGTTEYLTISDNPSVLDWFGNLWRNFAF 424 Q VFNTT+RGFGAFFE WD+ILTPI ALPTPKVGT EYLTISDNP VLDWFGNLWR FAF Sbjct: 361 QGVFNTTSRGFGAFFEQWDVILTPITALPTPKVGTREYLTISDNPDVLDWFGNLWRFFAF 420 Query: 425 TPLANLCGIPAISLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAIGGKWNDGKTP 484 TPLANLCG+PAIS+P+AT +H LPLGIQAI KQA+DGLLLQLAAQIERA+ GKWN G+ P Sbjct: 421 TPLANLCGMPAISMPMATQDHDLPLGIQAIAKQANDGLLLQLAAQIERALDGKWNGGRKP 480 Query: 485 AVHVT 489 VHV+ Sbjct: 481 KVHVS 485 >ref|YP_968577.1| amidase [Acidovorax citrulli AAC00-1] gb|ABM30803.1| Amidase [Acidovorax citrulli AAC00-1] Length = 492 Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/490 (74%), Positives = 404/490 (82%) Query: 1 MTLAMSWDEWTQHDGTALAGRVRSGELTPRELASQAASAVAKVDPALCGVVELFDDVIAD 60 M LAM WDEW HD LAG VR GE+TP ELA+QAA+ VAKV+PAL VVE+F D +AD Sbjct: 1 MGLAMGWDEWAAHDAVGLAGLVRQGEVTPVELAAQAAAGVAKVNPALSAVVEVFADAVAD 60 Query: 61 PARDGADLDGPFAGLPFLMKDLGPTLKGRLQEMGSLMMRGNRAAADTFLTAKMRKAGLNL 120 P + G GP AG+PF MKDLGPTL GRLQE GSL MRG+R D +LT +MR+AGLNL Sbjct: 61 PQQAGMQAGGPLAGVPFFMKDLGPTLAGRLQEQGSLFMRGHRPTEDAWLTQQMRRAGLNL 120 Query: 121 IGRTTTPEFGVCSSAENPAVYVTRNPWNTDYTTCGSSAGSAAMVAAGAVPIAHATDGGGS 180 +GRTTTPEFGVCSSAENPAVYVTRNPWNT YTTCGSSAG+AA+VAAG VP++HATDGGGS Sbjct: 121 MGRTTTPEFGVCSSAENPAVYVTRNPWNTGYTTCGSSAGTAAIVAAGVVPMSHATDGGGS 180 Query: 181 IRIPAGVNGNIGLKVSRGVFSLSPHLSDLTGLVSIQGCQSRTVRDTAGFVDACRGPAPGE 240 IRIPAG NGNIGLK SRGVFS++PH SD+TG VS QGC SRTVRDTA FVDACRG APGE Sbjct: 181 IRIPAGFNGNIGLKPSRGVFSIAPHASDITGYVSTQGCHSRTVRDTAAFVDACRGGAPGE 240 Query: 241 FMPFWTSPEPYAAMIARDPGRLRIALSHTWGDYRATPHIAAELERVGRFLEGLGHQVDYA 300 FMP+WT+PEPY +I RDP RLRIALSH WGDYRATP I AELE+ GRFLEGLGHQV++A Sbjct: 241 FMPYWTAPEPYTELIRRDPARLRIALSHEWGDYRATPAIVAELEKAGRFLEGLGHQVEWA 300 Query: 301 LPAIDYREAFAAQTACYISNFAVVIGNMLAARGLERPPAELIEPINIRIWEHGRDFSFAD 360 LP +D R AF AQT CYISNFA VI +L RGLERPPA+LIEPINIRIWE GR +A+ Sbjct: 301 LPQVDLRAAFRAQTTCYISNFAQVINGLLERRGLERPPADLIEPINIRIWEAGRGLPYAE 360 Query: 361 RARMQAVFNTTARGFGAFFEDWDIILTPIAALPTPKVGTTEYLTISDNPSVLDWFGNLWR 420 R RMQAVFNTTARGFGAFFEDWDI+LTPI A PTP VGTTEYLT S NP VLDWF NLWR Sbjct: 361 RHRMQAVFNTTARGFGAFFEDWDILLTPITARPTPPVGTTEYLTTSGNPDVLDWFDNLWR 420 Query: 421 NFAFTPLANLCGIPAISLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAIGGKWND 480 FA+TPL+NLCGIPAISLP+ +HGLP GI A +Q DGLLLQLAAQIERA+ G+WN Sbjct: 421 FFAYTPLSNLCGIPAISLPMGAQDHGLPFGIHAQARQGHDGLLLQLAAQIERALDGRWNG 480 Query: 481 GKTPAVHVTR 490 G+ P VHV + Sbjct: 481 GRRPGVHVAQ 490 >ref|ZP_06898399.1| amidase [Roseomonas cervicalis ATCC 49957] gb|EFH09909.1| amidase [Roseomonas cervicalis ATCC 49957] Length = 496 Score = 743 bits (1919), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/489 (73%), Positives = 413/489 (84%) Query: 1 MTLAMSWDEWTQHDGTALAGRVRSGELTPRELASQAASAVAKVDPALCGVVELFDDVIAD 60 M+LAM W+EW D TALA RVR GE++P ELA+QAA+ +A+ DPAL VVELF+DV+AD Sbjct: 4 MSLAMGWEEWAAQDATALAERVRRGEISPAELAAQAAAGIARTDPALSAVVELFEDVVAD 63 Query: 61 PARDGADLDGPFAGLPFLMKDLGPTLKGRLQEMGSLMMRGNRAAADTFLTAKMRKAGLNL 120 P DG D GPFAG+P+LMKDLGPTLKGRLQEMGSL+MRG+RA AD++LT ++R AGLN+ Sbjct: 64 PLADGMDPQGPFAGVPYLMKDLGPTLKGRLQEMGSLLMRGHRATADSYLTRRLRAAGLNI 123 Query: 121 IGRTTTPEFGVCSSAENPAVYVTRNPWNTDYTTCGSSAGSAAMVAAGAVPIAHATDGGGS 180 IGR+TTPEFGVCSSAENPAVYVTRNPW+T YTTCGSSAGSAAMVAA A+PI+HATDGGGS Sbjct: 124 IGRSTTPEFGVCSSAENPAVYVTRNPWDTRYTTCGSSAGSAAMVAASALPISHATDGGGS 183 Query: 181 IRIPAGVNGNIGLKVSRGVFSLSPHLSDLTGLVSIQGCQSRTVRDTAGFVDACRGPAPGE 240 IRIPAGVNG IGLK SRGVFS++P SDLTGLVS QGC +R+VRD A FVD+CRG APGE Sbjct: 184 IRIPAGVNGIIGLKASRGVFSIAPGASDLTGLVSTQGCLTRSVRDMALFVDSCRGGAPGE 243 Query: 241 FMPFWTSPEPYAAMIARDPGRLRIALSHTWGDYRATPHIAAELERVGRFLEGLGHQVDYA 300 FMP+WT+PEPY +I RDPGRLRIALSH WGDYRATP EL R+GRFLEGLGH V++A Sbjct: 244 FMPYWTAPEPYTTLIRRDPGRLRIALSHEWGDYRATPQRVEELARIGRFLEGLGHHVEWA 303 Query: 301 LPAIDYREAFAAQTACYISNFAVVIGNMLAARGLERPPAELIEPINIRIWEHGRDFSFAD 360 LP +D+R AFAAQT CY+SNF I MLA GL+RPP + +EPINIR+WE GRD ++A+ Sbjct: 304 LPKVDFRAAFAAQTLCYVSNFTQTINTMLAPLGLDRPPEDKVEPINIRLWEAGRDIAYAE 363 Query: 361 RARMQAVFNTTARGFGAFFEDWDIILTPIAALPTPKVGTTEYLTISDNPSVLDWFGNLWR 420 R RMQA FN T+RGFG FFE+WDIILTPI ALPTP +GTTEYLT SDNP V DWF NLWR Sbjct: 364 RYRMQAAFNATSRGFGEFFEEWDIILTPITALPTPLIGTTEYLTTSDNPDVWDWFENLWR 423 Query: 421 NFAFTPLANLCGIPAISLPLATNEHGLPLGIQAIGKQADDGLLLQLAAQIERAIGGKWND 480 NFA+TPL NLCGIP +SLPL + GLPLG+ +QA+DGLLLQLAAQIERAIGG+WN+ Sbjct: 424 NFAYTPLTNLCGIPGLSLPLGRQDDGLPLGLHFQARQANDGLLLQLAAQIERAIGGRWNE 483 Query: 481 GKTPAVHVT 489 G+ PAVHVT Sbjct: 484 GRRPAVHVT 492