BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0026.0015.p         (158 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01046187.1| hypothetical protein NB311A_01425 [Nitrobacte...   292   1e-77
ref|YP_531433.1| hypothetical protein RPC_1552 [Rhodopseudomonas...   281   3e-74
ref|ZP_01048485.1| hypothetical protein NB311A_09991 [Nitrobacte...   199   1e-49
ref|ZP_01035471.1| hypothetical protein ROS217_04804 [Roseovariu...   133   1e-29
ref|ZP_01047962.1| hypothetical protein NB311A_06463 [Nitrobacte...   130   7e-29

>ref|ZP_01046187.1| hypothetical protein NB311A_01425 [Nitrobacter sp. Nb-311A]
 gb|EAQ35991.1| hypothetical protein NB311A_01425 [Nitrobacter sp. Nb-311A]
          Length = 303

 Score =  292 bits (747), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 137/157 (87%), Positives = 148/157 (94%)

Query: 1   MAIRDAFGDSASHGVIVKTYSVTHLVKEAQGRYSPAAVVAVDREVVSGDPDQYVSTSYVE 60
           MAIRDAFG +ASHGVIVKTYSVTHLVKEAQGRYSPAAVVAV R+VVSGDP+QYVSTSYVE
Sbjct: 146 MAIRDAFGANASHGVIVKTYSVTHLVKEAQGRYSPAAVVAVSRDVVSGDPEQYVSTSYVE 205

Query: 61  RQNLSLRMSSRRFTRLTNGFSKKLENHIAAVALYVCHYNLCRTHEALRTTPAKALGVTEK 120
           RQNLSLRMSSRRFTRLTNGFSKKL+NH+AAVALYV HYNLCR HEALRTTPAKA+GV ++
Sbjct: 206 RQNLSLRMSSRRFTRLTNGFSKKLDNHVAAVALYVAHYNLCRVHEALRTTPAKAIGVADR 265

Query: 121 AWSVAQLVDAALSVTPVLPTETPPDRRRKFTVIQGGR 157
           AWS+ QLVDA L+V P LPTETPPDRRRKFTVIQGG+
Sbjct: 266 AWSIGQLVDAVLAVAPALPTETPPDRRRKFTVIQGGK 302


>ref|YP_531433.1| hypothetical protein RPC_1552 [Rhodopseudomonas palustris BisB18]
 gb|ABD87114.1| hypothetical protein RPC_1552 [Rhodopseudomonas palustris BisB18]
          Length = 191

 Score =  281 bits (718), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 131/151 (86%), Positives = 142/151 (94%)

Query: 1   MAIRDAFGDSASHGVIVKTYSVTHLVKEAQGRYSPAAVVAVDREVVSGDPDQYVSTSYVE 60
           MAIRDAFGD ASHGVIVKTYSVTHLVKEAQGRYSPAAVVAV +EVV+GDPDQY+STSYVE
Sbjct: 1   MAIRDAFGDGASHGVIVKTYSVTHLVKEAQGRYSPAAVVAVSKEVVTGDPDQYISTSYVE 60

Query: 61  RQNLSLRMSSRRFTRLTNGFSKKLENHIAAVALYVCHYNLCRTHEALRTTPAKALGVTEK 120
           RQNLSLRM SRRFTRLTNGFSKKL+NH+AAVALYV HYNLCR HEALRTTPAKA+GV ++
Sbjct: 61  RQNLSLRMGSRRFTRLTNGFSKKLDNHVAAVALYVAHYNLCRVHEALRTTPAKAIGVADR 120

Query: 121 AWSVAQLVDAALSVTPVLPTETPPDRRRKFT 151
            WS+AQLVDAAL+V P +PTETPPDRRRKFT
Sbjct: 121 TWSIAQLVDAALAVAPAMPTETPPDRRRKFT 151


>ref|ZP_01048485.1| hypothetical protein NB311A_09991 [Nitrobacter sp. Nb-311A]
 gb|EAQ33536.1| hypothetical protein NB311A_09991 [Nitrobacter sp. Nb-311A]
          Length = 296

 Score =  199 bits (505), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/157 (64%), Positives = 121/157 (77%), Gaps = 6/157 (3%)

Query: 2   AIRDAFGDSASHGVIVKTYSVTHL-VKEAQGRYSPAAVVAVDREVVSGDPDQYVSTSYVE 60
           AIRDAF   A HGVIVKTYSVT+L VKEA  RYSPA VVAV+R+VVSG P  ++STSYVE
Sbjct: 144 AIRDAFHGRAHHGVIVKTYSVTNLAVKEAARRYSPAEVVAVERDVVSGAP-SHISTSYVE 202

Query: 61  RQNLSLRMSSRRFTRLTNGFSKKLENHIAAVALYVCHYNLCRTHEALRTTPAKALGVTEK 120
           RQNL+LRM+ +RF RLTN FSK L NH AAV+LYV HYNLCR HEALRTTP+ ALGV+++
Sbjct: 203 RQNLTLRMTQKRFARLTNCFSKTLANHAAAVSLYVTHYNLCRVHEALRTTPSVALGVSDR 262

Query: 121 AWSVAQLVDAALSVTPVLPTETPPDRRRKFTVIQGGR 157
            W++  L+DA L++ P  P       RR FTVI GG+
Sbjct: 263 VWTIGDLLDATLAIEPNRPVRV----RRNFTVIDGGK 295


>ref|ZP_01035471.1| hypothetical protein ROS217_04804 [Roseovarius sp. 217]
 gb|EAQ25636.1| hypothetical protein ROS217_04804 [Roseovarius sp. 217]
          Length = 309

 Score =  133 bits (334), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 91/148 (61%), Gaps = 2/148 (1%)

Query: 2   AIRDAFGDSASHGVIVKTYSVTHLVKEAQGRYSPAAVVAVDREVVSGDPDQ-YVSTSYVE 60
           A+  AFG    +  ++K Y      K  + +YSPA    + +  V G PD+  +STSYVE
Sbjct: 159 AVEGAFGGDVDYAQLIKIYGGATGTKGHEKKYSPAECTGIKKRTVEGRPDKALISTSYVE 218

Query: 61  RQNLSLRMSSRRFTRLTNGFSKKLENHIAAVALYVCHYNLCRTHEALRTTPAKALGVTEK 120
           RQNL++RM  RRFTRLTNGFSKK+ENH+ AVAL+  +YN  + H+ L+ TPA   G+T++
Sbjct: 219 RQNLTMRMHMRRFTRLTNGFSKKVENHMHAVALHFMYYNFVKVHQTLKVTPAMEAGLTDR 278

Query: 121 AWSVAQLVDAALSVTPVLPTETPPDRRR 148
            W +A LV A +      P +  P ++R
Sbjct: 279 LWDIADLV-AIIDANEEAPKKRGPYKKR 305


>ref|ZP_01047962.1| hypothetical protein NB311A_06463 [Nitrobacter sp. Nb-311A]
 gb|EAQ34096.1| hypothetical protein NB311A_06463 [Nitrobacter sp. Nb-311A]
          Length = 344

 Score =  130 bits (327), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 63/128 (49%), Positives = 85/128 (66%), Gaps = 4/128 (3%)

Query: 2   AIRDAFGDSASHGVIVKTYSVTHLVKEAQGRYSPAAVVAVDREVVSGDPDQ-YVSTSYVE 60
           A+   FGD   + ++VK Y       +A+ RYSPA  +  +++   G PDQ ++STSYVE
Sbjct: 150 AVDAVFGDDVDYAMLVKLYGAD---PQAEVRYSPAKCIGAEKKPKIGSPDQKHISTSYVE 206

Query: 61  RQNLSLRMSSRRFTRLTNGFSKKLENHIAAVALYVCHYNLCRTHEALRTTPAKALGVTEK 120
           R NL++RM  RRFTRLTN FSKK+ENH AA+AL+  +YN  R H+ L+ TPA A GVT+K
Sbjct: 207 RSNLTMRMHMRRFTRLTNAFSKKVENHAAAIALHTMYYNFVRIHQTLKVTPAMAAGVTDK 266

Query: 121 AWSVAQLV 128
            W +  LV
Sbjct: 267 LWEMEDLV 274