BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0013.p (362 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772395.1| recombinase A [Bradyrhizobium japonicum USDA 11... 717 0.0 ref|YP_001241324.1| recombinase A [Bradyrhizobium sp. BTAi1] >gi... 711 0.0 ref|YP_001206903.1| recombinase A [Bradyrhizobium sp. ORS 278] >... 707 0.0 ref|ZP_08630599.1| RecA protein [Bradyrhizobiaceae bacterium SG-... 692 0.0 ref|YP_531448.1| recombinase A [Rhodopseudomonas palustris BisB1... 689 0.0 >ref|NP_772395.1| recombinase A [Bradyrhizobium japonicum USDA 110] sp|Q89I84.1|RECA_BRAJA RecName: Full=Protein RecA; AltName: Full=Recombinase A dbj|BAC51020.1| RecA protein [Bradyrhizobium japonicum USDA 110] Length = 362 Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/362 (97%), Positives = 358/362 (98%) Query: 1 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDI 60 MSATALRIVEGSSMDKSKAL+AALSQIERQFGKGSVMKLGKNDRSMDVE VSSGSLGLDI Sbjct: 1 MSATALRIVEGSSMDKSKALAAALSQIERQFGKGSVMKLGKNDRSMDVEAVSSGSLGLDI 60 Query: 61 ALGVGGLPKGRVVEIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGV 120 ALG+GGLPKGRVVEIYGPESSGKTTLALHTVAE QKKGGICAFIDAEHALDPVYARKLGV Sbjct: 61 ALGIGGLPKGRVVEIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGV 120 Query: 121 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQAR 180 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQAR Sbjct: 121 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQAR 180 Query: 181 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 240 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG Sbjct: 181 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 240 Query: 241 AIKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA 300 AIKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA Sbjct: 241 AIKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA 300 Query: 301 WFSYDSQRLGQGRENSKAFLKANPDITAKIEAAIRQNSGLISEQILAGTPERDAEGEEPT 360 WFSYDSQRLGQGRENSKAFLKANPDITAKIE AIRQNSGLI+EQILAGTPERDA+GEEP Sbjct: 301 WFSYDSQRLGQGRENSKAFLKANPDITAKIETAIRQNSGLIAEQILAGTPERDADGEEPA 360 Query: 361 EE 362 +E Sbjct: 361 DE 362 >ref|YP_001241324.1| recombinase A [Bradyrhizobium sp. BTAi1] gb|ABQ37418.1| RecA protein [Bradyrhizobium sp. BTAi1] Length = 362 Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/362 (95%), Positives = 358/362 (98%) Query: 1 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDI 60 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVS+GSLGLDI Sbjct: 1 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDI 60 Query: 61 ALGVGGLPKGRVVEIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGV 120 ALG+GGLPKGRV+EIYGPESSGKTTLALHTVAE QKKGGICAFIDAEHALDPVYARKLGV Sbjct: 61 ALGIGGLPKGRVIEIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGV 120 Query: 121 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQAR 180 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMG++LPGLQAR Sbjct: 121 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQAR 180 Query: 181 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 240 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYAS+RLDIRRIG Sbjct: 181 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASIRLDIRRIG 240 Query: 241 AIKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA 300 AIKERDEV+GNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA Sbjct: 241 AIKERDEVIGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA 300 Query: 301 WFSYDSQRLGQGRENSKAFLKANPDITAKIEAAIRQNSGLISEQILAGTPERDAEGEEPT 360 WFSYDSQRLGQGRENSK+FLKANPD+TAKIEAAIRQNSGLI+EQILAG ERDA+GEEP Sbjct: 301 WFSYDSQRLGQGRENSKSFLKANPDMTAKIEAAIRQNSGLIAEQILAGNAERDADGEEPA 360 Query: 361 EE 362 EE Sbjct: 361 EE 362 >ref|YP_001206903.1| recombinase A [Bradyrhizobium sp. ORS 278] emb|CAL78686.1| Recombinase A (recA) [Bradyrhizobium sp. ORS 278] Length = 362 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/362 (95%), Positives = 358/362 (98%) Query: 1 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDI 60 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVS+GSLGLDI Sbjct: 1 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSTGSLGLDI 60 Query: 61 ALGVGGLPKGRVVEIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGV 120 ALG+GGLPKGR+VEIYGPESSGKTTLALHTVAE QKKGGICAFIDAEHALDPVYARKLGV Sbjct: 61 ALGIGGLPKGRIVEIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGV 120 Query: 121 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQAR 180 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMG++LPGLQAR Sbjct: 121 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGESLPGLQAR 180 Query: 181 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 240 LMSQALRKLTASINKS+TMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG Sbjct: 181 LMSQALRKLTASINKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 240 Query: 241 AIKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA 300 AIKERDEV+GNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA Sbjct: 241 AIKERDEVIGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA 300 Query: 301 WFSYDSQRLGQGRENSKAFLKANPDITAKIEAAIRQNSGLISEQILAGTPERDAEGEEPT 360 WFSYDSQRLGQGRENSK+FLKANPD+TAKIEAAIRQNSGLI+EQILAG ERDA+GEEP Sbjct: 301 WFSYDSQRLGQGRENSKSFLKANPDMTAKIEAAIRQNSGLIAEQILAGAAERDADGEEPA 360 Query: 361 EE 362 EE Sbjct: 361 EE 362 >ref|ZP_08630599.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06978.1| RecA protein [Bradyrhizobiaceae bacterium SG-6C] Length = 362 Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/362 (93%), Positives = 354/362 (97%) Query: 1 MSATALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDI 60 M+ ALRIVEGSSMDK+KALSAALSQIERQFGKGSVMKLGKNDRSM+VE VSSGSLGLDI Sbjct: 1 MAPAALRIVEGSSMDKTKALSAALSQIERQFGKGSVMKLGKNDRSMEVEAVSSGSLGLDI 60 Query: 61 ALGVGGLPKGRVVEIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGV 120 ALG+GGLPKGRVVEIYGPESSGKTTLALHTVAE QKKGGICAFIDAEHALDPVYARKLGV Sbjct: 61 ALGIGGLPKGRVVEIYGPESSGKTTLALHTVAEAQKKGGICAFIDAEHALDPVYARKLGV 120 Query: 121 NIDELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQAR 180 N+DELLISQPD GEQALEI DTLVRSGAVDVL+VDSVAALVP+AELEGEMGD+LPGLQAR Sbjct: 121 NVDELLISQPDHGEQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDSLPGLQAR 180 Query: 181 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 240 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG Sbjct: 181 LMSQALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG 240 Query: 241 AIKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGA 300 IKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAG+VEKSGA Sbjct: 241 QIKERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGLVEKSGA 300 Query: 301 WFSYDSQRLGQGRENSKAFLKANPDITAKIEAAIRQNSGLISEQILAGTPERDAEGEEPT 360 WFSYDSQRLGQGREN+KAFLKANP++TAKIEA+IRQNSGLI+EQILAG+PERDA+GEEP Sbjct: 301 WFSYDSQRLGQGRENAKAFLKANPEMTAKIEASIRQNSGLIAEQILAGSPERDADGEEPA 360 Query: 361 EE 362 E+ Sbjct: 361 ED 362 >ref|YP_531448.1| recombinase A [Rhodopseudomonas palustris BisB18] gb|ABD87129.1| RecA protein [Rhodopseudomonas palustris BisB18] Length = 363 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 337/359 (93%), Positives = 351/359 (97%) Query: 4 TALRIVEGSSMDKSKALSAALSQIERQFGKGSVMKLGKNDRSMDVETVSSGSLGLDIALG 63 TALRIVEGSSMDK+KAL+AALSQIERQFGKGSVMKLGKNDRSMD+ET+SSGSLGLDIALG Sbjct: 5 TALRIVEGSSMDKTKALAAALSQIERQFGKGSVMKLGKNDRSMDIETISSGSLGLDIALG 64 Query: 64 VGGLPKGRVVEIYGPESSGKTTLALHTVAEGQKKGGICAFIDAEHALDPVYARKLGVNID 123 VGGLPKGRVVEIYGPESSGKTTLALH AE QKKGGICAFIDAEHALDPVYARKLGVN+D Sbjct: 65 VGGLPKGRVVEIYGPESSGKTTLALHCAAEAQKKGGICAFIDAEHALDPVYARKLGVNVD 124 Query: 124 ELLISQPDTGEQALEICDTLVRSGAVDVLVVDSVAALVPKAELEGEMGDALPGLQARLMS 183 ELLISQPD GEQALEI DTLVRSGAVDVL+VDSVAALVP+AELEGEMGDALPGLQARLMS Sbjct: 125 ELLISQPDHGEQALEIADTLVRSGAVDVLIVDSVAALVPRAELEGEMGDALPGLQARLMS 184 Query: 184 QALRKLTASINKSHTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIK 243 QALRKLTASINKS+TMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIG IK Sbjct: 185 QALRKLTASINKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGQIK 244 Query: 244 ERDEVVGNTTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVEKSGAWFS 303 ERDEVVGN TRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIV+KSGAWFS Sbjct: 245 ERDEVVGNQTRVKVVKNKLAPPFKQVEFDIMYGEGVSKMGEILDLGVKAGIVDKSGAWFS 304 Query: 304 YDSQRLGQGRENSKAFLKANPDITAKIEAAIRQNSGLISEQILAGTPERDAEGEEPTEE 362 YDSQRLGQGRENSKAFLKANPD+TAKIEAAIRQNSGLI+EQILAG+PERDA+GEEP +E Sbjct: 305 YDSQRLGQGRENSKAFLKANPDMTAKIEAAIRQNSGLIAEQILAGSPERDADGEEPIDE 363