BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0008.p (381 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772391.1| glycine cleavage system aminomethyltransferase ... 613 e-173 ref|ZP_08630596.1| glycine cleavage system T protein [Bradyrhizo... 607 e-172 ref|YP_001241320.1| glycine cleavage system aminomethyltransfera... 603 e-170 ref|YP_576899.1| glycine cleavage system aminomethyltransferase ... 599 e-169 ref|YP_317899.1| glycine cleavage system aminomethyltransferase ... 597 e-169 >ref|NP_772391.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium japonicum USDA 110] dbj|BAC51016.1| glycine cleavage system component T [Bradyrhizobium japonicum USDA 110] Length = 382 Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust. Identities = 304/381 (79%), Positives = 326/381 (85%) Query: 1 MLASETSPLKQTPLHALHLARGAKMVPFAGYDMPVQYAAGVLKEHLHTRKEAGLFDVSHM 60 MLA + LK+TPL+ LH++ G KMVPFAGYDMPVQY AGVLKEHLHTR +AGLFDVSHM Sbjct: 2 MLAHDQDSLKRTPLYDLHVSLGGKMVPFAGYDMPVQYPAGVLKEHLHTRSQAGLFDVSHM 61 Query: 61 GQLVLKAKSGKVADAALALEKLVPQDIVGIAPGRQRYAQFTNNEGGLLDDLMVANFGDHL 120 GQL L KSG+V DAA ALE+LVPQDIV IA GRQRYAQFTN +GG+LDDLMVANFGDHL Sbjct: 62 GQLRLLPKSGRVEDAARALERLVPQDIVAIALGRQRYAQFTNADGGILDDLMVANFGDHL 121 Query: 121 FLVVNAACKEEDEAHLRAHLSDSCEIVALADRALIALQGPKAESALAKLCPDVSSMKFMD 180 FLVVNAACK EDEAHLRAHLSD C I +LADRALIALQGPKAE+ LAK C SMKFMD Sbjct: 122 FLVVNAACKAEDEAHLRAHLSDDCVIDSLADRALIALQGPKAEAVLAKFCAKAPSMKFMD 181 Query: 181 AGPRRVADIDCFVSRSGYTGEDGFEISVPADKAEALVTALLDNPDVLPIGLGARDSLRLE 240 AGP VA I CFVSRSGYTGEDGFEISVPA AE L LL+NPDV+PIGLGARDSLRLE Sbjct: 182 AGPHEVAGIKCFVSRSGYTGEDGFEISVPAADAERLAKTLLENPDVVPIGLGARDSLRLE 241 Query: 241 AGLCLYGHDIDTTTTPVEGALEWSVQKVRRSGGARAGGFPGADKILAQFADGAGRRRVGL 300 AGLCLYGHDIDT TTPVE ALEWSVQK RRSGGARAGGFPGA+KILA F GA RRRVGL Sbjct: 242 AGLCLYGHDIDTATTPVEAALEWSVQKSRRSGGARAGGFPGAEKILAHFDQGAARRRVGL 301 Query: 301 KPDGRAPVREGAALFADAASTEQIGKVTSGGFGPSLNAPVAMGYLPTALSTAGTTVFAEV 360 + GRAPVREGA LFAD+AS E IG+VTSGGFGPSLNAPVAMGY+PTA S GT++FAEV Sbjct: 302 RAQGRAPVREGALLFADSASAEPIGQVTSGGFGPSLNAPVAMGYVPTASSALGTSLFAEV 361 Query: 361 RGQRLPLKVAATPFVPNTYKR 381 RGQRLP+ VAA PFV NTYKR Sbjct: 362 RGQRLPMTVAAMPFVKNTYKR 382 >ref|ZP_08630596.1| glycine cleavage system T protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06975.1| glycine cleavage system T protein [Bradyrhizobiaceae bacterium SG-6C] Length = 373 Score = 607 bits (1566), Expect = e-172, Method: Compositional matrix adjust. Identities = 298/373 (79%), Positives = 322/373 (86%) Query: 9 LKQTPLHALHLARGAKMVPFAGYDMPVQYAAGVLKEHLHTRKEAGLFDVSHMGQLVLKAK 68 +K+ PLH LH+ARG K+VPFAGY+MPVQYAAGVLKEHLHTR AGLFDVSHMGQ+VL+ K Sbjct: 1 MKRVPLHDLHVARGGKIVPFAGYEMPVQYAAGVLKEHLHTRASAGLFDVSHMGQIVLRPK 60 Query: 69 SGKVADAALALEKLVPQDIVGIAPGRQRYAQFTNNEGGLLDDLMVANFGDHLFLVVNAAC 128 SGKV DAA ALE+LVPQDIV +APGRQRYAQFTN+ GG+LDDLMVANFGDHLFLVVNAAC Sbjct: 61 SGKVEDAARALEQLVPQDIVAVAPGRQRYAQFTNDGGGILDDLMVANFGDHLFLVVNAAC 120 Query: 129 KEEDEAHLRAHLSDSCEIVALADRALIALQGPKAESALAKLCPDVSSMKFMDAGPRRVAD 188 K EDEAHLR HLSD+C I L DRALIALQGPKA LAKL P V++MKFMDAGP V Sbjct: 121 KTEDEAHLRNHLSDTCAIEPLTDRALIALQGPKAAEVLAKLAPSVTTMKFMDAGPHAVLG 180 Query: 189 IDCFVSRSGYTGEDGFEISVPADKAEALVTALLDNPDVLPIGLGARDSLRLEAGLCLYGH 248 I CFVSRSGYTGEDGFEISVPA AE L TALL +P VLPIGLGARDSLRLEAGLCLYGH Sbjct: 181 IACFVSRSGYTGEDGFEISVPAKDAERLATALLADPAVLPIGLGARDSLRLEAGLCLYGH 240 Query: 249 DIDTTTTPVEGALEWSVQKVRRSGGARAGGFPGADKILAQFADGAGRRRVGLKPDGRAPV 308 DIDTTTTPVEGALEWSVQK RR+GGARAGGFPGAD IL QF GA RRRVGL+ +GRAPV Sbjct: 241 DIDTTTTPVEGALEWSVQKSRRTGGARAGGFPGADIILKQFDTGASRRRVGLRAEGRAPV 300 Query: 309 REGAALFADAASTEQIGKVTSGGFGPSLNAPVAMGYLPTALSTAGTTVFAEVRGQRLPLK 368 REGAAL+A ST+ IG VTSGGFGP+L APVAMGYLPT LS GT VFA+VRGQRLPL+ Sbjct: 301 REGAALYASKTSTDTIGTVTSGGFGPTLKAPVAMGYLPTPLSNEGTIVFADVRGQRLPLR 360 Query: 369 VAATPFVPNTYKR 381 V+A PFVPN YKR Sbjct: 361 VSAMPFVPNGYKR 373 >ref|YP_001241320.1| glycine cleavage system aminomethyltransferase T [Bradyrhizobium sp. BTAi1] gb|ABQ37414.1| glycine cleavage system T-protein (aminomethyltransferase) [Bradyrhizobium sp. BTAi1] Length = 384 Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust. Identities = 297/380 (78%), Positives = 326/380 (85%) Query: 2 LASETSPLKQTPLHALHLARGAKMVPFAGYDMPVQYAAGVLKEHLHTRKEAGLFDVSHMG 61 +A+ SPLK+TPL+ALH++ G KMVPFAGY+MPVQYA GVLKEHLHTR AGLFDVSHMG Sbjct: 5 VATPASPLKRTPLYALHVSLGGKMVPFAGYEMPVQYAPGVLKEHLHTRAAAGLFDVSHMG 64 Query: 62 QLVLKAKSGKVADAALALEKLVPQDIVGIAPGRQRYAQFTNNEGGLLDDLMVANFGDHLF 121 Q+ + KSG VADAA ALE+LVPQDI+GI PGRQRYAQFTN EGG+LDDLMVANFG+HL Sbjct: 65 QVAVVPKSGTVADAAAALERLVPQDIIGIPPGRQRYAQFTNAEGGILDDLMVANFGEHLV 124 Query: 122 LVVNAACKEEDEAHLRAHLSDSCEIVALADRALIALQGPKAESALAKLCPDVSSMKFMDA 181 LVVNAACK+ D LR LSD C++ LADRAL+ALQGPKA S LAK C D +M+FMDA Sbjct: 125 LVVNAACKDADIQLLRDGLSDVCDVQPLADRALLALQGPKAASVLAKFCADAEAMRFMDA 184 Query: 182 GPRRVADIDCFVSRSGYTGEDGFEISVPADKAEALVTALLDNPDVLPIGLGARDSLRLEA 241 GPR V + C+VSRSGYTGEDG+EISVPADKAE L ALL + DVLPIGLGARDSLRLEA Sbjct: 185 GPRNVDGLTCYVSRSGYTGEDGYEISVPADKAEQLAEALLSDKDVLPIGLGARDSLRLEA 244 Query: 242 GLCLYGHDIDTTTTPVEGALEWSVQKVRRSGGARAGGFPGADKILAQFADGAGRRRVGLK 301 GLCLYGHDIDT TTPVE ALEWSVQKVRRSGGARAGGFPGA KILAQF GA RRRVGLK Sbjct: 245 GLCLYGHDIDTATTPVEAALEWSVQKVRRSGGARAGGFPGAGKILAQFDSGAARRRVGLK 304 Query: 302 PDGRAPVREGAALFADAASTEQIGKVTSGGFGPSLNAPVAMGYLPTALSTAGTTVFAEVR 361 P+GRAPVREGA LFA A S E IGKVTSGGFGP+LNAPVAMGY+PTALS T +FA+VR Sbjct: 305 PEGRAPVREGATLFATADSAEPIGKVTSGGFGPTLNAPVAMGYVPTALSALDTVLFADVR 364 Query: 362 GQRLPLKVAATPFVPNTYKR 381 GQRLPL+VAATPFVPNTYKR Sbjct: 365 GQRLPLRVAATPFVPNTYKR 384 >ref|YP_576899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter hamburgensis X14] gb|ABE62439.1| glycine cleavage system T protein [Nitrobacter hamburgensis X14] Length = 387 Score = 599 bits (1545), Expect = e-169, Method: Compositional matrix adjust. Identities = 293/382 (76%), Positives = 326/382 (85%), Gaps = 4/382 (1%) Query: 4 SETSPLKQTPLHALHLARGAKMVPFAGYDMPVQYAAGVLKEHLHTRKEAGLFDVSHMGQL 63 SE L++TPLHALHLARG ++VPFAG+DMPVQYA+GVLKEHLHTR AGLFDVSHMGQ+ Sbjct: 6 SEAPVLQRTPLHALHLARGGRLVPFAGHDMPVQYASGVLKEHLHTRAGAGLFDVSHMGQI 65 Query: 64 VLKAKSGKVADAALALEKLVPQDIVGIAPGRQRYAQFTNNEGGLLDDLMVANFGDHLFLV 123 L+ KSGKV DAALALE+LVPQDIV +APGRQRYA FTN GGLLDDLMVANFGDHLFLV Sbjct: 66 ALRPKSGKVGDAALALERLVPQDIVAVAPGRQRYALFTNAAGGLLDDLMVANFGDHLFLV 125 Query: 124 VNAACKEEDEAHLRAHLSDSCEIVALADRALIALQGPKAESALAKLCPDVSSMKFMDAGP 183 VN ACK DEAHLR HLSD C I LADRAL+ALQGPKA S LAK CP+ +M+FMDAGP Sbjct: 126 VNGACKAADEAHLREHLSDVCTIEVLADRALVALQGPKAASVLAKACPEAPAMRFMDAGP 185 Query: 184 RRV----ADIDCFVSRSGYTGEDGFEISVPADKAEALVTALLDNPDVLPIGLGARDSLRL 239 +V I CFVSRSGYTGEDGFEIS+PA +AEALV+ LLD+PDV+P+GLGARDSLRL Sbjct: 186 HQVRIAGGAIACFVSRSGYTGEDGFEISIPAAQAEALVSGLLDDPDVMPVGLGARDSLRL 245 Query: 240 EAGLCLYGHDIDTTTTPVEGALEWSVQKVRRSGGARAGGFPGADKILAQFADGAGRRRVG 299 EAGLCLYGHDID TTTPVE ALEWSVQK RRSGGARAGGFPGA+ IL QF GA RRRVG Sbjct: 246 EAGLCLYGHDIDATTTPVEAALEWSVQKSRRSGGARAGGFPGANVILPQFEQGASRRRVG 305 Query: 300 LKPDGRAPVREGAALFADAASTEQIGKVTSGGFGPSLNAPVAMGYLPTALSTAGTTVFAE 359 L+P+GRAPVREGA LFADA+S++ IG VTSGGFGPSLNAP+AMGYLP + G TVFA+ Sbjct: 306 LRPEGRAPVREGAPLFADASSSDPIGTVTSGGFGPSLNAPIAMGYLPPLHAAIGGTVFAD 365 Query: 360 VRGQRLPLKVAATPFVPNTYKR 381 VRGQRLPL+V+ PFVP+ YKR Sbjct: 366 VRGQRLPLRVSEMPFVPHNYKR 387 >ref|YP_317899.1| glycine cleavage system aminomethyltransferase T [Nitrobacter winogradskyi Nb-255] gb|ABA04547.1| glycine cleavage system T protein [Nitrobacter winogradskyi Nb-255] Length = 383 Score = 597 bits (1540), Expect = e-169, Method: Compositional matrix adjust. Identities = 289/378 (76%), Positives = 322/378 (85%) Query: 4 SETSPLKQTPLHALHLARGAKMVPFAGYDMPVQYAAGVLKEHLHTRKEAGLFDVSHMGQL 63 S+ L++TPLHAL L RG KMV FAGYDMPVQYA+GVLKEHLHTR +AGLFDVSHMGQ+ Sbjct: 6 SDAPTLQKTPLHALLLERGGKMVAFAGYDMPVQYASGVLKEHLHTRAKAGLFDVSHMGQI 65 Query: 64 VLKAKSGKVADAALALEKLVPQDIVGIAPGRQRYAQFTNNEGGLLDDLMVANFGDHLFLV 123 L+ KSG V DAALALE+LVPQDIV +APGRQRYAQFTN GGLLDDLMVANFGDHLFLV Sbjct: 66 ALRPKSGDVRDAALALERLVPQDIVAVAPGRQRYAQFTNPAGGLLDDLMVANFGDHLFLV 125 Query: 124 VNAACKEEDEAHLRAHLSDSCEIVALADRALIALQGPKAESALAKLCPDVSSMKFMDAGP 183 VN ACK DEAHLR HLSD+C I L DRALIALQGPKA S LAK CP+V +MKFM+AGP Sbjct: 126 VNGACKAADEAHLREHLSDACAIEVLTDRALIALQGPKAASVLAKKCPEVPAMKFMEAGP 185 Query: 184 RRVADIDCFVSRSGYTGEDGFEISVPADKAEALVTALLDNPDVLPIGLGARDSLRLEAGL 243 R+V + CFVSRSGYTGEDG+EIS+PA +AE +V+ALLD+PDV P+GLGARDSLRLEAGL Sbjct: 186 RQVGGVACFVSRSGYTGEDGYEISIPAARAEDVVSALLDDPDVAPVGLGARDSLRLEAGL 245 Query: 244 CLYGHDIDTTTTPVEGALEWSVQKVRRSGGARAGGFPGADKILAQFADGAGRRRVGLKPD 303 CLYGHDI TTTPVE ALEWSVQK RRSGG RAGGFPGA+ IL QF GA RRRVGL+P+ Sbjct: 246 CLYGHDIGATTTPVEAALEWSVQKSRRSGGVRAGGFPGANVILPQFEQGAARRRVGLRPE 305 Query: 304 GRAPVREGAALFADAASTEQIGKVTSGGFGPSLNAPVAMGYLPTALSTAGTTVFAEVRGQ 363 GRAPVREGA LFADAAS + IG VTSGGFGPSLNAP+AMGYLP + + G V+AEVRGQ Sbjct: 306 GRAPVREGAPLFADAASADSIGAVTSGGFGPSLNAPIAMGYLPVSHAATGGLVYAEVRGQ 365 Query: 364 RLPLKVAATPFVPNTYKR 381 RLPL++ A PFVP+ YKR Sbjct: 366 RLPLRICAMPFVPHNYKR 383