BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0026.0004.p (168 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772388.1| hypothetical protein blr5748 [Bradyrhizobium ja... 204 4e-51 ref|YP_001241305.1| hypothetical protein BBta_5428 [Bradyrhizobi... 198 2e-49 ref|YP_001204806.1| putative signal peptide [Bradyrhizobium sp. ... 198 2e-49 ref|ZP_08780221.1| hypothetical protein Mettu_1210 [Methylobacte... 116 1e-24 ref|YP_001865406.1| hypothetical protein Npun_R1801 [Nostoc punc... 101 4e-20 >ref|NP_772388.1| hypothetical protein blr5748 [Bradyrhizobium japonicum USDA 110] dbj|BAC51013.1| blr5748 [Bradyrhizobium japonicum USDA 110] Length = 166 Score = 204 bits (518), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 97/147 (65%), Positives = 117/147 (79%) Query: 21 AFAAGPLPDAVAAPGESPVLSVHAEGVQVYECKPVTDGKLAWSFREPVATLIAEDRTVGR 80 A AA LP+A+AAPGE+ VLSVHAEG QVYECK +GKLAWSFREPVATL++E +TVGR Sbjct: 19 AGAAETLPEAIAAPGETVVLSVHAEGAQVYECKAGAEGKLAWSFREPVATLLSEGKTVGR 78 Query: 81 HYAGPNWEHVDGSAVTARTAGSAPGTTAADIPWLKLDVIAHRGNGLLSGVATVQRINTSG 140 HYAGP+WE D SAV + G+APG ADIPWLKL+V + RG+G+L+ V TVQRINT G Sbjct: 79 HYAGPSWELADSSAVVGKAIGNAPGAKGADIPWLKLEVASRRGSGVLTPVTTVQRINTHG 138 Query: 141 GELSGACDKPGALKGAAYSADYVFLRR 167 G+L G+C+K G K A YSADYVFL++ Sbjct: 139 GKLEGSCEKAGEFKSAPYSADYVFLKK 165 >ref|YP_001241305.1| hypothetical protein BBta_5428 [Bradyrhizobium sp. BTAi1] gb|ABQ37399.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 168 Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 92/143 (64%), Positives = 112/143 (78%), Gaps = 1/143 (0%) Query: 27 LPDAVAAPGESPVLSVHAEGVQVYECKPVTDGKLAWSFREPVATLIAEDRTVGRHYAGPN 86 LPDA+ A GE PVL++HAEG QVYECK DGKLAW+FREP+ATL+A+ +TVGRH AGP+ Sbjct: 26 LPDALVAAGEKPVLTLHAEGAQVYECKTDKDGKLAWTFREPIATLVADGKTVGRHSAGPS 85 Query: 87 WEHVDGSAVTARTAGSAPGTTAADIPWLKLDVIAHR-GNGLLSGVATVQRINTSGGELSG 145 WEH DGS + R G+A G T DIPWLKL+V+ HR G G+LS V TVQRINT+GG+L G Sbjct: 86 WEHQDGSIIGGRVQGTAIGATDNDIPWLKLEVVPHRGGKGVLSDVTTVQRINTAGGKLEG 145 Query: 146 ACDKPGALKGAAYSADYVFLRRD 168 AC+ G + AYSADYVFLR++ Sbjct: 146 ACETAGQFRSVAYSADYVFLRKE 168 >ref|YP_001204806.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL76569.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 168 Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 92/143 (64%), Positives = 112/143 (78%), Gaps = 1/143 (0%) Query: 27 LPDAVAAPGESPVLSVHAEGVQVYECKPVTDGKLAWSFREPVATLIAEDRTVGRHYAGPN 86 +PDA+ A GE P L++HAEG QVYECK DGKLAW FREP+ATL A+ +TVGRH+AGP+ Sbjct: 26 IPDALIAAGEKPALTLHAEGAQVYECKTDKDGKLAWGFREPIATLFADGKTVGRHFAGPS 85 Query: 87 WEHVDGSAVTARTAGSAPGTTAADIPWLKLDVIAHR-GNGLLSGVATVQRINTSGGELSG 145 WEH DGS V R G+A G T +DIPWLKL V++HR G G+LS V TVQRINT+GG+L G Sbjct: 86 WEHQDGSIVGGRVVGTAVGATDSDIPWLKLAVVSHRGGQGVLSEVTTVQRINTAGGKLEG 145 Query: 146 ACDKPGALKGAAYSADYVFLRRD 168 ACD G L+ AY+ADYVFLR++ Sbjct: 146 ACDTAGQLRSVAYAADYVFLRKE 168 >ref|ZP_08780221.1| hypothetical protein Mettu_1210 [Methylobacter tundripaludum SV96] gb|EGW22396.1| hypothetical protein Mettu_1210 [Methylobacter tundripaludum SV96] Length = 170 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 66/172 (38%), Positives = 100/172 (58%), Gaps = 7/172 (4%) Query: 1 MTMALVRAVVLASFSLTGSAAFAAGPLPDAVAAP-GESPVLSVHAEGVQVYECKPVTDGK 59 M A+++ +++ + ++ AA+A +P+ + P G SPVL+VHA+G Q+Y+C G+ Sbjct: 1 MVNAMIKKILIL-WVMSQGAAYAEVSIPEQIKVPAGYSPVLTVHAKGDQIYQCS-ANKGE 58 Query: 60 LAWSFREPVATLI-AEDRTVGRHYAGPNWEHVDGSAVTARTAGSAPGTTAADIPWLKLDV 118 AW + P A L A+ + VG H AGP WE+ +GS V R + I WL ++V Sbjct: 59 YAWETQAPDAKLFDAQGKIVGNHTAGPLWEYKEGSRVVGRVVKKIDMAPGSAIAWLLVEV 118 Query: 119 IAHRGNGLLSGVATVQRINTSGG-ELSGACD--KPGALKGAAYSADYVFLRR 167 ++H+G+GL S V+ + RINT GG S CD G K AY+ADYVF + Sbjct: 119 VSHKGDGLFSNVSYINRINTHGGLPPSSGCDANHLGGEKRIAYTADYVFYAK 170 >ref|YP_001865406.1| hypothetical protein Npun_R1801 [Nostoc punctiforme PCC 73102] gb|ACC80463.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 198 Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 7/147 (4%) Query: 27 LPDAVAAP-GESPVLSVHAEGVQVYECKPVTDG--KLAWSFREPVATLIAED-RTVGRHY 82 +P + P GE +L A+G Q+Y CKP ++ + W+ + P A L+ E + +G+HY Sbjct: 49 IPATIKVPNGEQLLLKASAKGSQIYICKPKSESPEQYEWTLKAPDAVLLDEQGQDLGKHY 108 Query: 83 AGPNWEHVDGSAVTARTAGSAPGTTAADIPWLKLDVIAHRGNGLLSGVATVQRINTSGGE 142 AGP WE DGS V + IPWL L+ +H GNGL V VQRINT GG+ Sbjct: 109 AGPTWEAKDGSKVLGKLKSKVNAPEDDAIPWLLLEAQSHEGNGLFHQVNWVQRINTVGGK 168 Query: 143 LS-GACDKPGALKGAA--YSADYVFLR 166 CDK + + Y+ADY+F + Sbjct: 169 APVQGCDKSSENRETSVNYTADYLFYK 195