BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0009.p (421 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767636.1| HlyD family secretion protein [Bradyrhizobium j... 560 e-157 ref|ZP_07026939.1| efflux transporter, RND family, MFP subunit [... 543 e-152 ref|ZP_08628970.1| putative Co/Zn/Cd efflux system membrane fusi... 541 e-151 ref|YP_002289298.1| OqxA [Oligotropha carboxidovorans OM5] >gi|2... 537 e-150 ref|YP_004632672.1| efflux transporter, RND family [Oligotropha ... 536 e-150 >ref|NP_767636.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46261.1| HlyD family secretion protein [Bradyrhizobium japonicum USDA 110] Length = 410 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 283/348 (81%), Positives = 315/348 (90%), Gaps = 3/348 (0%) Query: 62 KRTVTDWDEFTGRFEAIEEVQVRARVGGFVNSVEFKDGAIVHAGDLLYIIDPRPFEAVVL 121 KRTVTDWDEFTGRFEA+EEVQVR RVGGFVNSVEF+DGAIVH GDLLY+IDPRPFEAV Sbjct: 64 KRTVTDWDEFTGRFEAVEEVQVRPRVGGFVNSVEFQDGAIVHQGDLLYVIDPRPFEAVAE 123 Query: 122 QAEGQLADARAKGELAKRDLERGLNLVQTSAVSEQVVDQRRQALQAARAAETQAEGTLKA 181 QA+GQL+DARAK ELAKR+L+RGLNLVQTSAVSEQVVDQRRQALQAA AAE QAEG LKA Sbjct: 124 QADGQLSDARAKVELAKRELDRGLNLVQTSAVSEQVVDQRRQALQAAHAAEVQAEGALKA 183 Query: 182 AQLNVEFTHVLAPITGRVSRHLVTPGNLVQGSEGG-ATLLTSIVSLDPIYIYFDVDEATY 240 A+LN+EFTHV AP+TGRVSRHLV+PGNLVQGS+ G +TLLTSIV+LDPIY+YFD+DE T+ Sbjct: 184 AKLNIEFTHVTAPLTGRVSRHLVSPGNLVQGSDTGTSTLLTSIVALDPIYVYFDMDETTF 243 Query: 241 QRNSKLWFEGRRPSSRDTANPVQIALTGETKPSHEGKMDFLDNRLDVSTATLRSRAVVPN 300 + SKLWFEG+RPSSRDTANPVQ+ L GETKPSHEG ++FLDNRLDVST TLRSRAV+ N Sbjct: 244 IKYSKLWFEGKRPSSRDTANPVQVTLAGETKPSHEGTINFLDNRLDVSTGTLRSRAVIKN 303 Query: 301 KDLSVLPGQFGRVRIIGSSPYEALLIPDSAVATDQSRKIVFVVKDDNTVEARAVTLGPLD 360 DLS+LPGQFGRVR+IGS+PYEALLIPD AVATDQSRKIVFVVK D+TVEAR V LGP+D Sbjct: 304 TDLSILPGQFGRVRLIGSAPYEALLIPDVAVATDQSRKIVFVVKPDDTVEARPVVLGPID 363 Query: 361 DGLRVVREGLKAEDHVIVDGLQRARVGAKVTPKMAQAPADSKPAAGDK 408 DGLRV+REGLKA+D VIV+G+QRARVGAKV P A APA KP GDK Sbjct: 364 DGLRVIREGLKADDRVIVNGIQRARVGAKVAPSPAPAPAGGKP--GDK 409 >ref|ZP_07026939.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2] gb|EFI51782.1| efflux transporter, RND family, MFP subunit [Afipia sp. 1NLS2] Length = 401 Score = 543 bits (1399), Expect = e-152, Method: Compositional matrix adjust. Identities = 263/362 (72%), Positives = 306/362 (84%), Gaps = 1/362 (0%) Query: 31 LAALALGGCDNKSAQSQAAPPPPPVTVAQPVKRTVTDWDEFTGRFEAIEEVQVRARVGGF 90 L AL L GC S QAA PPP VTVA PVKRTVTDWDEF+GRF+A+E+VQ+RARV GF Sbjct: 29 LMALGLSGC-GPSQNQQAAAPPPSVTVAHPVKRTVTDWDEFSGRFDAVEQVQIRARVTGF 87 Query: 91 VNSVEFKDGAIVHAGDLLYIIDPRPFEAVVLQAEGQLADARAKGELAKRDLERGLNLVQT 150 V VEFKDGAIV AGDLLY IDPR ++AV QA+GQL DA+A ELAKR+LER +L++T Sbjct: 88 VTGVEFKDGAIVKAGDLLYTIDPRQYQAVAEQAQGQLQDAKAHVELAKRELERASSLIKT 147 Query: 151 SAVSEQVVDQRRQALQAARAAETQAEGTLKAAQLNVEFTHVLAPITGRVSRHLVTPGNLV 210 AVS+ VVDQR Q LQ A A+ QAEG LK AQL+VEF+ V APITGR+SRHLVT GNLV Sbjct: 148 DAVSQSVVDQRTQQLQTAEASALQAEGALKRAQLDVEFSQVRAPITGRISRHLVTVGNLV 207 Query: 211 QGSEGGATLLTSIVSLDPIYIYFDVDEATYQRNSKLWFEGRRPSSRDTANPVQIALTGET 270 QGSE GATLLTSIVS+DPI++YFD+DE+ Y +NS+LWFEG+RPSSRDT NPVQ+ L GET Sbjct: 208 QGSESGATLLTSIVSMDPIHLYFDMDESIYLKNSRLWFEGKRPSSRDTPNPVQVLLAGET 267 Query: 271 KPSHEGKMDFLDNRLDVSTATLRSRAVVPNKDLSVLPGQFGRVRIIGSSPYEALLIPDSA 330 KPSH GKMDFLDNRLDV T TLR RA+V N DLS+LPGQF RVR++GSSPYEALL+PD+A Sbjct: 268 KPSHMGKMDFLDNRLDVGTGTLRGRALVDNHDLSILPGQFARVRVLGSSPYEALLLPDTA 327 Query: 331 VATDQSRKIVFVVKDDNTVEARAVTLGPLDDGLRVVREGLKAEDHVIVDGLQRARVGAKV 390 +ATDQSRKIVFVVK DNTV A+ V LGP+DDGLRV+REGL A+D+VI++GLQRAR+GAKV Sbjct: 328 IATDQSRKIVFVVKSDNTVIAKPVVLGPIDDGLRVIREGLNADDNVIIEGLQRARIGAKV 387 Query: 391 TP 392 +P Sbjct: 388 SP 389 >ref|ZP_08628970.1| putative Co/Zn/Cd efflux system membrane fusion protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08329.1| putative Co/Zn/Cd efflux system membrane fusion protein [Bradyrhizobiaceae bacterium SG-6C] Length = 366 Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust. Identities = 268/368 (72%), Positives = 311/368 (84%), Gaps = 2/368 (0%) Query: 36 LGGCDNKSAQSQAAPPPPPVTVAQPVKRTVTDWDEFTGRFEAIEEVQVRARVGGFVNSVE 95 + GC+ K +Q AA PP VTVA P KRTVTDWDEFTGRF+AIE+VQVRARV GFV SVE Sbjct: 1 MTGCE-KPSQPPAASAPP-VTVANPTKRTVTDWDEFTGRFDAIEQVQVRARVTGFVTSVE 58 Query: 96 FKDGAIVHAGDLLYIIDPRPFEAVVLQAEGQLADARAKGELAKRDLERGLNLVQTSAVSE 155 FKDGA V GDLLY+IDPR ++AV QA GQLADA+AK +LA+R+L R LV+TSAVSE Sbjct: 59 FKDGAFVKTGDLLYVIDPRQYQAVAEQARGQLADAKAKVDLAERELARAETLVKTSAVSE 118 Query: 156 QVVDQRRQALQAARAAETQAEGTLKAAQLNVEFTHVLAPITGRVSRHLVTPGNLVQGSEG 215 VVDQRRQ LQ+A+A+ QAEG L+ A L+VEFT V API GRVSRHLVT GNLVQGSE Sbjct: 119 SVVDQRRQQLQSAQASAMQAEGALERADLDVEFTKVKAPIDGRVSRHLVTVGNLVQGSES 178 Query: 216 GATLLTSIVSLDPIYIYFDVDEATYQRNSKLWFEGRRPSSRDTANPVQIALTGETKPSHE 275 GAT+LT+IVSLDPI++YFD+DE+ Y +N++LWFEG+RPSSRDTANPVQI L+GETKPSH+ Sbjct: 179 GATVLTNIVSLDPIHVYFDMDESIYLKNNRLWFEGKRPSSRDTANPVQITLSGETKPSHD 238 Query: 276 GKMDFLDNRLDVSTATLRSRAVVPNKDLSVLPGQFGRVRIIGSSPYEALLIPDSAVATDQ 335 G MDFLDNRLDV T TLR RA+V N+DLS+LPGQF RVR++GS+PYEALL+PD+A+ATDQ Sbjct: 239 GAMDFLDNRLDVGTGTLRGRAIVKNQDLSILPGQFARVRVLGSAPYEALLLPDTAIATDQ 298 Query: 336 SRKIVFVVKDDNTVEARAVTLGPLDDGLRVVREGLKAEDHVIVDGLQRARVGAKVTPKMA 395 SRKIVFVVK DNTVEAR V LGPLDDGLRV+REGLKA+D VIVDGLQRAR+GAKVTP Sbjct: 299 SRKIVFVVKADNTVEARPVVLGPLDDGLRVIREGLKADDKVIVDGLQRARIGAKVTPHPP 358 Query: 396 QAPADSKP 403 +KP Sbjct: 359 ATSGGAKP 366 >ref|YP_002289298.1| OqxA [Oligotropha carboxidovorans OM5] gb|ACI93433.1| OqxA [Oligotropha carboxidovorans OM5] Length = 443 Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust. Identities = 275/394 (69%), Positives = 322/394 (81%), Gaps = 7/394 (1%) Query: 11 RHASRGLSLRPWLALAPIGLLAALALGGCDNKSAQSQAAPPPPPVTVAQPVKRTVTDWDE 70 R S G S +LA+ + +LA + L C S Q QAAP P V+V+ PVKR VTDWDE Sbjct: 56 RSRSLGFS---FLAVVAMPVLA-VGLASC-GPSEQKQAAPLPA-VSVSTPVKRMVTDWDE 109 Query: 71 FTGRFEAIEEVQVRARVGGFVNSVEFKDGAIVHAGDLLYIIDPRPFEAVVLQAEGQLADA 130 F+GRF+A+++VQVRARV GFV SVEFKDGAIV AGDLLY+IDPR ++AV QAEGQL DA Sbjct: 110 FSGRFDAVQQVQVRARVTGFVTSVEFKDGAIVKAGDLLYVIDPRQYQAVAEQAEGQLQDA 169 Query: 131 RAKGELAKRDLERGLNLVQTSAVSEQVVDQRRQALQAARAAETQAEGTLKAAQLNVEFTH 190 +A+ LAKR+LER +L++T AVS+ VVDQR Q LQ A AA QAEG LK AQL+VEF+ Sbjct: 170 KARVVLAKRELERASSLIRTDAVSQSVVDQRTQQLQTAEAAVLQAEGALKRAQLDVEFSQ 229 Query: 191 VLAPITGRVSRHLVTPGNLVQGSEGGATLLTSIVSLDPIYIYFDVDEATYQRNSKLWFEG 250 V API+GR+SRHLVT GNLVQGSE GATLLTSIVS+DPI+IYFD+DE YQRNS+LWFEG Sbjct: 230 VRAPISGRISRHLVTVGNLVQGSESGATLLTSIVSMDPIHIYFDMDERVYQRNSRLWFEG 289 Query: 251 RRPSSRDTANPVQIALTGETKPSHEGKMDFLDNRLDVSTATLRSRAVVPNKDLSVLPGQF 310 +RPSSRDT NPVQ+ LTGETKPSHEGKMDFLDNRLD T TLR RA+V N DLS+LPGQF Sbjct: 290 KRPSSRDTPNPVQVLLTGETKPSHEGKMDFLDNRLDAGTGTLRGRALVDNHDLSILPGQF 349 Query: 311 GRVRIIGSSPYEALLIPDSAVATDQSRKIVFVVKDDNTVEARAVTLGPLDDGLRVVREGL 370 R+R+IGS+PYEALL+PD+AVATDQSRKIVFVVK D++VEAR VT GPLDDGLRV+R GL Sbjct: 350 ARIRVIGSAPYEALLVPDAAVATDQSRKIVFVVKPDDSVEAREVTPGPLDDGLRVIRTGL 409 Query: 371 KAEDHVIVDGLQRARVGAKVTPKMAQAP-ADSKP 403 KA+D V+V+GLQR RVGAKV+P A A D+KP Sbjct: 410 KADDRVVVEGLQRVRVGAKVSPHPANADNGDAKP 443 >ref|YP_004632672.1| efflux transporter, RND family [Oligotropha carboxidovorans OM5] gb|AEI02855.1| efflux transporter, RND family [Oligotropha carboxidovorans OM4] gb|AEI06431.1| efflux transporter, RND family [Oligotropha carboxidovorans OM5] Length = 397 Score = 536 bits (1382), Expect = e-150, Method: Compositional matrix adjust. Identities = 275/394 (69%), Positives = 322/394 (81%), Gaps = 7/394 (1%) Query: 11 RHASRGLSLRPWLALAPIGLLAALALGGCDNKSAQSQAAPPPPPVTVAQPVKRTVTDWDE 70 R S G S +LA+ + +LA + L C S Q QAAP P V+V+ PVKR VTDWDE Sbjct: 10 RSRSLGFS---FLAVVAMPVLA-VGLASC-GPSEQKQAAPLPA-VSVSTPVKRMVTDWDE 63 Query: 71 FTGRFEAIEEVQVRARVGGFVNSVEFKDGAIVHAGDLLYIIDPRPFEAVVLQAEGQLADA 130 F+GRF+A+++VQVRARV GFV SVEFKDGAIV AGDLLY+IDPR ++AV QAEGQL DA Sbjct: 64 FSGRFDAVQQVQVRARVTGFVTSVEFKDGAIVKAGDLLYVIDPRQYQAVAEQAEGQLQDA 123 Query: 131 RAKGELAKRDLERGLNLVQTSAVSEQVVDQRRQALQAARAAETQAEGTLKAAQLNVEFTH 190 +A+ LAKR+LER +L++T AVS+ VVDQR Q LQ A AA QAEG LK AQL+VEF+ Sbjct: 124 KARVVLAKRELERASSLIRTDAVSQSVVDQRTQQLQTAEAAVLQAEGALKRAQLDVEFSQ 183 Query: 191 VLAPITGRVSRHLVTPGNLVQGSEGGATLLTSIVSLDPIYIYFDVDEATYQRNSKLWFEG 250 V API+GR+SRHLVT GNLVQGSE GATLLTSIVS+DPI+IYFD+DE YQRNS+LWFEG Sbjct: 184 VRAPISGRISRHLVTVGNLVQGSESGATLLTSIVSMDPIHIYFDMDERVYQRNSRLWFEG 243 Query: 251 RRPSSRDTANPVQIALTGETKPSHEGKMDFLDNRLDVSTATLRSRAVVPNKDLSVLPGQF 310 +RPSSRDT NPVQ+ LTGETKPSHEGKMDFLDNRLD T TLR RA+V N DLS+LPGQF Sbjct: 244 KRPSSRDTPNPVQVLLTGETKPSHEGKMDFLDNRLDAGTGTLRGRALVDNHDLSILPGQF 303 Query: 311 GRVRIIGSSPYEALLIPDSAVATDQSRKIVFVVKDDNTVEARAVTLGPLDDGLRVVREGL 370 R+R+IGS+PYEALL+PD+AVATDQSRKIVFVVK D++VEAR VT GPLDDGLRV+R GL Sbjct: 304 ARIRVIGSAPYEALLVPDAAVATDQSRKIVFVVKPDDSVEAREVTPGPLDDGLRVIRTGL 363 Query: 371 KAEDHVIVDGLQRARVGAKVTPKMAQAP-ADSKP 403 KA+D V+V+GLQR RVGAKV+P A A D+KP Sbjct: 364 KADDRVVVEGLQRVRVGAKVSPHPANADNGDAKP 397