BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0024.0005.p (365 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_575700.1| hypothetical protein Nham_0344 [Nitrobacter ham... 483 e-134 ref|NP_767640.1| hypothetical protein bll1000 [Bradyrhizobium ja... 471 e-130 ref|YP_571515.1| hypothetical protein RPD_4398 [Rhodopseudomonas... 466 e-129 ref|ZP_01045310.1| hypothetical protein NB311A_15262 [Nitrobacte... 464 e-129 ref|ZP_08629111.1| AttH component of AttEFGH ABC transport syste... 460 e-127 >ref|YP_575700.1| hypothetical protein Nham_0344 [Nitrobacter hamburgensis X14] gb|ABE61240.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 362 Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust. Identities = 235/366 (64%), Positives = 283/366 (77%), Gaps = 5/366 (1%) Query: 1 MSASGTITRRAFAGGALGLALGGK-TFAQGFAGLGETAEGFAAVSPGKPFTFPADHGPHP 59 MS S I+RRAFA G +A G K + AQGFAGLG A GFAAV+PG+ F FPADH PHP Sbjct: 1 MSVSAKISRRAFATGLAVVAFGRKVSLAQGFAGLGGEASGFAAVTPGRSFVFPADHAPHP 60 Query: 60 EFRIEWWYVTANLSEKKKNGXAYGAQWTLFRQAMKAGGPAEGWANQQLWMGHAAVTSTGT 119 ++RIEWWY+TANLS+ + G AYGAQWTLFRQAM+ G +GWANQQ+WMGHAAVT T Sbjct: 61 DYRIEWWYLTANLSDAE--GRAYGAQWTLFRQAMQPGPQRDGWANQQIWMGHAAVTRADT 118 Query: 120 HRFSETFARGGGGRKKKTVEATPFRAWIDAWELRGRDAFDAQRVAPLELKASAADFSTAL 179 HR+SETFARGG G + EA PFRAWID+W++RG D A +APL++ A+ ADFS L Sbjct: 119 HRYSETFARGGVG--QAGAEADPFRAWIDSWQMRGLDGMSAMNIAPLQINATGADFSYTL 176 Query: 180 RLEADRALVLQGDHGYSRKSDRGQASYYYSQPFYKASGRIVIDDRPVDVTGMAWMDREWS 239 RL+AD+ALVL+GD GYSRKS+RGQASYYYSQP++ A G + ID + V V+G AWMDREWS Sbjct: 177 RLDADKALVLEGDAGYSRKSERGQASYYYSQPYFTADGTVTIDGKSVSVSGQAWMDREWS 236 Query: 240 SQPLAADQTGWDWFSLHLPGDEKLMLYRLRQKDGRENLFGNWIMPDGRSAEIAADGNSIA 299 SQPLA DQTGWDWFSLHL EKLML+RLRQ D + + GNWI PDG+S ++ + + Sbjct: 237 SQPLAPDQTGWDWFSLHLGTGEKLMLFRLRQTDAKPSFAGNWIGPDGQSVALSPESIEMT 296 Query: 300 PLATTEIDGRKLPTSWRVSLPARGLAIETTPLNPKAWMGTSFPYWEGPIRFAGSHAGIGY 359 P+A TE+ RKLPTSWR+++ RGLAIET PL ++WMGTSF YWEGP+ F G+H GIGY Sbjct: 297 PIAMTEVADRKLPTSWRIAVRDRGLAIETLPLYARSWMGTSFSYWEGPVSFTGTHRGIGY 356 Query: 360 LEMTGY 365 LEMTGY Sbjct: 357 LEMTGY 362 >ref|NP_767640.1| hypothetical protein bll1000 [Bradyrhizobium japonicum USDA 110] dbj|BAC46265.1| bll1000 [Bradyrhizobium japonicum USDA 110] Length = 360 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 237/365 (64%), Positives = 279/365 (76%), Gaps = 5/365 (1%) Query: 1 MSASGTITRRAFAGGALGLALGGKTFAQGFAGLGETAEGFAAVSPGKPFTFPADHGPHPE 60 MSA I+RRAFAGG LAL AQG+AGLGETA+GFA V+PGK F FPADHGPHPE Sbjct: 1 MSAD-KISRRAFAGGIAALALARHAGAQGYAGLGETADGFAKVTPGKTFAFPADHGPHPE 59 Query: 61 FRIEWWYVTANLSEKKKNGXAYGAQWTLFRQAMKAGGPAEGWANQQLWMGHAAVTSTGTH 120 FRIEWWY+TAN+ + +G A G QWTLFRQA + G EGWANQQ+WM HAAVT TH Sbjct: 60 FRIEWWYLTANIVDS--SGAACGLQWTLFRQAAQPGPQGEGWANQQIWMAHAAVTRADTH 117 Query: 121 RFSETFARGGGGRKKKTVEATPFRAWIDAWELRGRDAFDAQRVAPLELKASAADFSTALR 180 RFSE F+RGG G + VEA PF AWID WE++G + D + +APL LKAS +FS AL Sbjct: 118 RFSELFSRGGIG--QAGVEAKPFTAWIDDWEMKGLERTDDRTLAPLTLKASGTNFSYALT 175 Query: 181 LEADRALVLQGDHGYSRKSDRGQASYYYSQPFYKASGRIVIDDRPVDVTGMAWMDREWSS 240 LEADRA+VLQGD G+SRKS+RGQASYYYSQPFY+A G + IDD+PVDV+G AWMDREWSS Sbjct: 176 LEADRAVVLQGDGGFSRKSERGQASYYYSQPFYRARGTLTIDDKPVDVSGQAWMDREWSS 235 Query: 241 QPLAADQTGWDWFSLHLPGDEKLMLYRLRQKDGRENLFGNWIMPDGRSAEIAADGNSIAP 300 QPL ADQTGWDW SLHL +KLMLYRLRQKDG++ FGNWI G + I+ + P Sbjct: 236 QPLDADQTGWDWLSLHLASGDKLMLYRLRQKDGKDYPFGNWITATGSTQMISGSDIQMTP 295 Query: 301 LATTEIDGRKLPTSWRVSLPARGLAIETTPLNPKAWMGTSFPYWEGPIRFAGSHAGIGYL 360 AT E+ GRKLP W++++P+R +I+ PLNPKAWMGT F YWEGPI FAG+H G+GYL Sbjct: 296 KATAEVAGRKLPVEWQIAIPSRSFSIQCKPLNPKAWMGTGFSYWEGPISFAGTHDGVGYL 355 Query: 361 EMTGY 365 E+TGY Sbjct: 356 ELTGY 360 >ref|YP_571515.1| hypothetical protein RPD_4398 [Rhodopseudomonas palustris BisB5] gb|ABE41614.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 362 Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust. Identities = 231/366 (63%), Positives = 276/366 (75%), Gaps = 5/366 (1%) Query: 1 MSASGTITRRAFAGGALGL-ALGGKTFAQGFAGLGETAEGFAAVSPGKPFTFPADHGPHP 59 MSA G I+RRAFAGG L L A G + AQGFAGLG A FA V PG+ +FP DHGPHP Sbjct: 1 MSARGLISRRAFAGGLLALGASGQRVLAQGFAGLGSDAGEFAPVVPGRRLSFPEDHGPHP 60 Query: 60 EFRIEWWYVTANLSEKKKNGXAYGAQWTLFRQAMKAGGPAEGWANQQLWMGHAAVTSTGT 119 +FRIEWWY+TANL K +G YG QWTLFRQAM G EGWA+QQ+WM HAA++S T Sbjct: 61 DFRIEWWYLTANL--KDADGKPYGVQWTLFRQAMTPGPQREGWASQQIWMAHAALSSAET 118 Query: 120 HRFSETFARGGGGRKKKTVEATPFRAWIDAWELRGRDAFDAQRVAPLELKASAADFSTAL 179 HRF+E F+RGG G + V A PFRA ID W ++G DA A ++PL++ AS +DFS L Sbjct: 119 HRFAEKFSRGGIG--QAGVTAAPFRALIDDWAMQGGDAMKAATLSPLDVTASGSDFSYRL 176 Query: 180 RLEADRALVLQGDHGYSRKSDRGQASYYYSQPFYKASGRIVIDDRPVDVTGMAWMDREWS 239 +L A+R LVLQGD G+SRKSDRGQASYYYSQP++ A G + +D R ++V+G AWMDREWS Sbjct: 177 QLTAERPLVLQGDAGFSRKSDRGQASYYYSQPYFAARGTVTLDGRAIEVSGTAWMDREWS 236 Query: 240 SQPLAADQTGWDWFSLHLPGDEKLMLYRLRQKDGRENLFGNWIMPDGRSAEIAADGNSIA 299 SQPLA+DQTGWDWFSLHL EK+ML+RLRQ G+ GNWI DG+S +A D ++ Sbjct: 237 SQPLASDQTGWDWFSLHLASGEKVMLFRLRQSGGQAYFAGNWIGLDGKSEPLAPDAIALE 296 Query: 300 PLATTEIDGRKLPTSWRVSLPARGLAIETTPLNPKAWMGTSFPYWEGPIRFAGSHAGIGY 359 P+ TE GR+LPT WR+SLP GL+IETTPLNP +WMGTSFPYWEGPI F+GS AGIGY Sbjct: 297 PIGFTETAGRRLPTRWRISLPGHGLSIETTPLNPNSWMGTSFPYWEGPISFSGSQAGIGY 356 Query: 360 LEMTGY 365 LEMTGY Sbjct: 357 LEMTGY 362 >ref|ZP_01045310.1| hypothetical protein NB311A_15262 [Nitrobacter sp. Nb-311A] gb|EAQ36638.1| hypothetical protein NB311A_15262 [Nitrobacter sp. Nb-311A] Length = 362 Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust. Identities = 233/366 (63%), Positives = 270/366 (73%), Gaps = 5/366 (1%) Query: 1 MSASGTITRRAFAGGALGLALGGKT-FAQGFAGLGETAEGFAAVSPGKPFTFPADHGPHP 59 MSAS I+RR FA G L G +T AQ FA LG A GFA+V PGK F FP DHGPHP Sbjct: 1 MSASANISRRTFATGLAVLGFGRRTSLAQTFADLGGDASGFASVIPGKSFEFPRDHGPHP 60 Query: 60 EFRIEWWYVTANLSEKKKNGXAYGAQWTLFRQAMKAGGPAEGWANQQLWMGHAAVTSTGT 119 ++RIEWWY+TANL K G G QWTLFRQAM+ G +GWA+QQ+WMGHAAVT T Sbjct: 61 DYRIEWWYLTANL--KDSAGERLGVQWTLFRQAMQPGPQRDGWASQQVWMGHAAVTRADT 118 Query: 120 HRFSETFARGGGGRKKKTVEATPFRAWIDAWELRGRDAFDAQRVAPLELKASAADFSTAL 179 HR+SETFARGG G + VEA PFRAWID+W++RG D A VAPLE+ AS+A+FS AL Sbjct: 119 HRYSETFARGGVG--QSGVEADPFRAWIDSWQMRGLDRISALTVAPLEINASSAEFSYAL 176 Query: 180 RLEADRALVLQGDHGYSRKSDRGQASYYYSQPFYKASGRIVIDDRPVDVTGMAWMDREWS 239 RLEA +ALVLQG+ GYS KS+RGQASYYYSQP + A+G + ID RPV+V G AWMDREWS Sbjct: 177 RLEAGKALVLQGEAGYSVKSERGQASYYYSQPHFTAAGTVTIDGRPVNVIGQAWMDREWS 236 Query: 240 SQPLAADQTGWDWFSLHLPGDEKLMLYRLRQKDGRENLFGNWIMPDGRSAEIAADGNSIA 299 SQPLA+DQTGWDWFSLHL EKLMLYRLRQ G+ L NWI DGRS + + + Sbjct: 237 SQPLASDQTGWDWFSLHLGTGEKLMLYRLRQTQGQPYLTCNWIGLDGRSVALPSTSIDMI 296 Query: 300 PLATTEIDGRKLPTSWRVSLPARGLAIETTPLNPKAWMGTSFPYWEGPIRFAGSHAGIGY 359 P ATTE+ GR LPTSWR+ L R + IET LNP +WMGT F YWEGPI F G+H G+GY Sbjct: 297 PTATTEVAGRTLPTSWRIVLRDRAMTIETIALNPASWMGTRFSYWEGPISFTGTHQGVGY 356 Query: 360 LEMTGY 365 LE+TGY Sbjct: 357 LELTGY 362 >ref|ZP_08629111.1| AttH component of AttEFGH ABC transport system [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08470.1| AttH component of AttEFGH ABC transport system [Bradyrhizobiaceae bacterium SG-6C] Length = 362 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 231/366 (63%), Positives = 270/366 (73%), Gaps = 5/366 (1%) Query: 1 MSASGTITRRAFAGGALGLALGGK-TFAQGFAGLGETAEGFAAVSPGKPFTFPADHGPHP 59 MSA I+RRAF G +L L G AQGFAGLG ++GFA V PG+ FP DHGPHP Sbjct: 1 MSADRHISRRAFIGSSLIAPLAGTLAHAQGFAGLGGGSDGFAEVVPGRMLEFPRDHGPHP 60 Query: 60 EFRIEWWYVTANLSEKKKNGXAYGAQWTLFRQAMKAGGPAEGWANQQLWMGHAAVTSTGT 119 ++RIEWWY+TANL + G +GAQWTLFRQAM G EGWAN+Q+WMGHAAVT Sbjct: 61 DYRIEWWYLTANL--RDAAGSEWGAQWTLFRQAMTPGAQQEGWANRQIWMGHAAVTGPTI 118 Query: 120 HRFSETFARGGGGRKKKTVEATPFRAWIDAWELRGRDAFDAQRVAPLELKASAADFSTAL 179 HR++E FARGG G + EA PF AWID+WE+RG D F AQ +APL + AS+ DF L Sbjct: 119 HRYAEKFARGGIG--QAGAEAAPFHAWIDSWEMRGGDGFHAQTIAPLFVTASSDDFGYVL 176 Query: 180 RLEADRALVLQGDHGYSRKSDRGQASYYYSQPFYKASGRIVIDDRPVDVTGMAWMDREWS 239 L DR LVLQGD GYS+KS+RGQASYYYSQP++ ASG + +DDR V VTG AWMDREWS Sbjct: 177 SLACDRPLVLQGDRGYSKKSERGQASYYYSQPYFTASGTLTLDDRQVAVTGRAWMDREWS 236 Query: 240 SQPLAADQTGWDWFSLHLPGDEKLMLYRLRQKDGRENLFGNWIMPDGRSAEIAADGNSIA 299 SQPLA+DQTGWDWFSLHL EK+ML+RLRQKDG GNWI GRS I AD ++ Sbjct: 237 SQPLASDQTGWDWFSLHLDTGEKVMLFRLRQKDGGNYFAGNWIDRSGRSEPIPADEIAMT 296 Query: 300 PLATTEIDGRKLPTSWRVSLPARGLAIETTPLNPKAWMGTSFPYWEGPIRFAGSHAGIGY 359 P A T+IDGRKLPTSWRV++ +R L I++ PLN K+WMGT F YWEGPI F GSH G+GY Sbjct: 297 PTAFTDIDGRKLPTSWRVAVASRELKIDSVPLNAKSWMGTRFAYWEGPISFKGSHGGVGY 356 Query: 360 LEMTGY 365 LEMTGY Sbjct: 357 LEMTGY 362