BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0023.0026.p (286 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242045.1| two component transcriptional regulator [Bra... 432 e-119 ref|YP_001207589.1| OmpR family two component response transcrip... 429 e-118 ref|NP_773291.1| two-component response regulator [Bradyrhizobiu... 402 e-110 ref|YP_485580.1| two component transcriptional regulator [Rhodop... 395 e-108 ref|YP_004108130.1| winged helix family two component transcript... 384 e-104 >ref|YP_001242045.1| two component transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ38139.1| two component transcriptional regulator, winged helix family [Bradyrhizobium sp. BTAi1] Length = 246 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 212/240 (88%), Positives = 224/240 (93%) Query: 1 MTQAAPNILVVEDDRETRSLIAKYLRTNSCHVTTASDGREMAKAMTDHRVDLLVLDVMLP 60 M Q P+ILVVEDDRETR+LIAKYLR NSC+VTTA+DGREM + M DHR+DLL+LDVMLP Sbjct: 1 MAQTQPHILVVEDDRETRTLIAKYLRNNSCNVTTATDGREMTRIMGDHRIDLLILDVMLP 60 Query: 61 GEDGLSLCRKVRAESQTPIIMLTARGEDVDRILGLEMGADDYLAKPFNPRELLARINAVL 120 GEDGL+LCRK+RAESQ PIIMLTARGEDVDRILGLEMGADDYL KPFNPRELLARINAVL Sbjct: 61 GEDGLTLCRKLRAESQVPIIMLTARGEDVDRILGLEMGADDYLPKPFNPRELLARINAVL 120 Query: 121 RRQAAARNASAIEGATTLTFLGWRIDIRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV 180 RRQAAA ASA EGAT L+FLGWRID RLRELRNPEGARVAMTSAEFDLLRTFCERPGRV Sbjct: 121 RRQAAAMTASATEGATALSFLGWRIDFRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV 180 Query: 181 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYVFTPRVDAV 240 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGY+FTP V+ V Sbjct: 181 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYMFTPVVEVV 240 >ref|YP_001207589.1| OmpR family two component response transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL79372.1| putative two component response transcriptional regulator (OmpR family) [Bradyrhizobium sp. ORS 278] Length = 246 Score = 429 bits (1104), Expect = e-118, Method: Compositional matrix adjust. Identities = 210/240 (87%), Positives = 224/240 (93%) Query: 1 MTQAAPNILVVEDDRETRSLIAKYLRTNSCHVTTASDGREMAKAMTDHRVDLLVLDVMLP 60 M Q P+ILVVEDDRETR+LIAKYLR N+C+VTTA+DGREM + M DHR+DLL+LDVMLP Sbjct: 1 MAQTQPHILVVEDDRETRTLIAKYLRNNACNVTTATDGREMTRIMGDHRIDLLILDVMLP 60 Query: 61 GEDGLSLCRKVRAESQTPIIMLTARGEDVDRILGLEMGADDYLAKPFNPRELLARINAVL 120 GEDGL+LCRK+RAESQ PIIMLTARGEDVDRILGLEMGADDYL KPFNPRELLARINAVL Sbjct: 61 GEDGLTLCRKLRAESQVPIIMLTARGEDVDRILGLEMGADDYLPKPFNPRELLARINAVL 120 Query: 121 RRQAAARNASAIEGATTLTFLGWRIDIRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV 180 RRQAAA ASA EGAT L+FLGW+ID RLRELRNPEGARVAMTSAEFDLLRTFCERPGRV Sbjct: 121 RRQAAAITASATEGATALSFLGWKIDFRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV 180 Query: 181 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYVFTPRVDAV 240 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGY+FTP V+ V Sbjct: 181 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYMFTPVVEVV 240 >ref|NP_773291.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC51916.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] Length = 256 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 205/251 (81%), Positives = 226/251 (90%) Query: 1 MTQAAPNILVVEDDRETRSLIAKYLRTNSCHVTTASDGREMAKAMTDHRVDLLVLDVMLP 60 M PNILVVEDDRETR+LIAKYLR N+C+VT SDGREM++AM DHRVDL++LDVMLP Sbjct: 1 MAILNPNILVVEDDRETRTLIAKYLRNNACNVTAVSDGREMSRAMADHRVDLIILDVMLP 60 Query: 61 GEDGLSLCRKVRAESQTPIIMLTARGEDVDRILGLEMGADDYLAKPFNPRELLARINAVL 120 GEDGLSLCRKVR+E+QTPIIMLTARGEDVDRI+GLEMGADDYL KPFNPRELLARINAVL Sbjct: 61 GEDGLSLCRKVRSEAQTPIIMLTARGEDVDRIVGLEMGADDYLTKPFNPRELLARINAVL 120 Query: 121 RRQAAARNASAIEGATTLTFLGWRIDIRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV 180 RRQAAA+ AS+IEGA+TL F GWRID+RLRELRNPEGARVA+TSAEFDLLRTFCERPGRV Sbjct: 121 RRQAAAQAASSIEGASTLAFEGWRIDLRLRELRNPEGARVAVTSAEFDLLRTFCERPGRV 180 Query: 181 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYVFTPRVDAV 240 LSRDSLLDLTQGR+ GSFERSIDVLVSRIRRKIEP+P + T+IKTVRSGGY+FTPR +A Sbjct: 181 LSRDSLLDLTQGRNTGSFERSIDVLVSRIRRKIEPNPHDPTIIKTVRSGGYLFTPRTEAA 240 Query: 241 AVWGTDHEAAA 251 EA A Sbjct: 241 RTEAASTEAVA 251 >ref|YP_485580.1| two component transcriptional regulator [Rhodopseudomonas palustris HaA2] gb|ABD06669.1| two component transcriptional regulator, winged helix family [Rhodopseudomonas palustris HaA2] Length = 240 Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust. Identities = 194/240 (80%), Positives = 213/240 (88%) Query: 1 MTQAAPNILVVEDDRETRSLIAKYLRTNSCHVTTASDGREMAKAMTDHRVDLLVLDVMLP 60 M+ A P+ILVVEDDRETR+LIAKYLR N CHV TA DGREM ++D RVDL+VLDVMLP Sbjct: 1 MSTAPPHILVVEDDRETRALIAKYLRNNECHVVTAQDGREMDSRLSDQRVDLVVLDVMLP 60 Query: 61 GEDGLSLCRKVRAESQTPIIMLTARGEDVDRILGLEMGADDYLAKPFNPRELLARINAVL 120 GEDGLSLCR+VRA S PIIMLTARGEDVDRILGLEMGADDYLAKPFNPRELLARI +VL Sbjct: 61 GEDGLSLCRRVRASSPLPIIMLTARGEDVDRILGLEMGADDYLAKPFNPRELLARIRSVL 120 Query: 121 RRQAAARNASAIEGATTLTFLGWRIDIRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV 180 RRQ+ A+ ASA GAT LTFLGWRID RLRELRNP+GA VAMTSAEFDLL+ FCERPGRV Sbjct: 121 RRQSLAQTASATSGATALTFLGWRIDFRLRELRNPDGALVAMTSAEFDLLQAFCERPGRV 180 Query: 181 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYVFTPRVDAV 240 LSR++LLDLT GR+AGSFERSIDVLVSRIRRKIEPDPQ ++IKTVRSGGY+FTP V+ V Sbjct: 181 LSREALLDLTHGRNAGSFERSIDVLVSRIRRKIEPDPQSVSIIKTVRSGGYMFTPAVETV 240 >ref|YP_004108130.1| winged helix family two component transcriptional regulator [Rhodopseudomonas palustris DX-1] gb|ADU43397.1| two component transcriptional regulator, winged helix family [Rhodopseudomonas palustris DX-1] Length = 240 Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust. Identities = 188/239 (78%), Positives = 214/239 (89%) Query: 1 MTQAAPNILVVEDDRETRSLIAKYLRTNSCHVTTASDGREMAKAMTDHRVDLLVLDVMLP 60 M+ P+ILVVEDDRETR+LIAKYLR+N+C+V TA+DGREM + + DHRVDL+VLDVMLP Sbjct: 1 MSSTPPSILVVEDDRETRALIAKYLRSNNCNVATAADGREMERWIADHRVDLVVLDVMLP 60 Query: 61 GEDGLSLCRKVRAESQTPIIMLTARGEDVDRILGLEMGADDYLAKPFNPRELLARINAVL 120 GEDGLSLCRK+RA SQ PIIMLTARG+DVDRILGLEMGADDYL KPFNPRELLARI +VL Sbjct: 61 GEDGLSLCRKIRANSQLPIIMLTARGDDVDRILGLEMGADDYLPKPFNPRELLARIRSVL 120 Query: 121 RRQAAARNASAIEGATTLTFLGWRIDIRLRELRNPEGARVAMTSAEFDLLRTFCERPGRV 180 RRQA+A ASA GATTL FLGWR+D R RELRNP+GA VAMTSAEFDLL+ CER GRV Sbjct: 121 RRQASAVTASAAPGATTLGFLGWRMDCRRRELRNPDGALVAMTSAEFDLLQALCERAGRV 180 Query: 181 LSRDSLLDLTQGRSAGSFERSIDVLVSRIRRKIEPDPQEATMIKTVRSGGYVFTPRVDA 239 LSR++LLDLT GRS G+FERSIDVL+SRIRRKIEPDP+EAT+IKTVR+GGYVFTP V++ Sbjct: 181 LSREALLDLTHGRSVGAFERSIDVLISRIRRKIEPDPREATLIKTVRAGGYVFTPMVES 239