BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0009.p (397 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773125.1| hypothetical protein bll6485 [Bradyrhizobium ja... 691 0.0 gb|AAN40985.1| signal peptide protein [Bradyrhizobium japonicum] 659 0.0 ref|YP_003910345.1| 40-residue YVTN family beta-propeller repeat... 627 e-177 ref|ZP_07028608.1| 40-residue YVTN family beta-propeller repeat ... 625 e-177 ref|YP_004156371.1| 40-residue yvtn family beta-propeller repeat... 623 e-176 >ref|NP_773125.1| hypothetical protein bll6485 [Bradyrhizobium japonicum USDA 110] dbj|BAC51750.1| bll6485 [Bradyrhizobium japonicum USDA 110] Length = 489 Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/381 (86%), Positives = 354/381 (92%) Query: 9 LLATTVLAMSSSAFAGQAPGAASAPDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIR 68 LA T+LA S+A+AGQAPGA S+PDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIR Sbjct: 13 FLAATMLATGSAAWAGQAPGALSSPDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIR 72 Query: 69 LGDPQPGNFSPLYKGQVLVHGMGYSPDHRTLAVVSIGSNSVSFIDTATSSVKHVTYIGRS 128 LGDPQPGNFSPLYKGQVLVHGMG+SPDH+ LAVVSIGSNSV+FIDTAT++VKH TYIGRS Sbjct: 73 LGDPQPGNFSPLYKGQVLVHGMGFSPDHKMLAVVSIGSNSVTFIDTATNAVKHTTYIGRS 132 Query: 129 PHEAFFTPDGKEVWVTVRGENYISVIDAQSFKETTRIEVPAGPGMQIFSPDGKYGYICSS 188 PHEAFFTPDGKEVWVTVRGENYISVID QSF+E RI P+GPGMQ+FSPDGKY YICSS Sbjct: 133 PHEAFFTPDGKEVWVTVRGENYISVIDPQSFEERRRITTPSGPGMQMFSPDGKYAYICSS 192 Query: 189 FNPETDVVSVADHQIVAKVKQESPFCPNIAATPDGDQVWFTLKDVGRTQVFNAKPPFNPI 248 FNPETDVV+VA+H+I+AKVKQESPFCPNIA TPDG+QVWFTLKD GRTQVFNA+PPFNPI Sbjct: 193 FNPETDVVAVAEHKIIAKVKQESPFCPNIAVTPDGNQVWFTLKDTGRTQVFNARPPFNPI 252 Query: 249 KTIDTGPITNHVNFARTSKGTFAYVTIGGTNEVKVFRTDDFSQVATIPVGNLPHGVWPSG 308 +TIDTGPITNHVNFA T++GTFAYVTIGG N+VKVFRTDDFSQVATIPVGNLPHGVWPSG Sbjct: 253 RTIDTGPITNHVNFAHTARGTFAYVTIGGLNQVKVFRTDDFSQVATIPVGNLPHGVWPSG 312 Query: 309 DGTRIYVGLENADALAAIDTATNKVIANIPIGQAPQAIAYVPNAAPNPDDRQNLQGLGVA 368 DGTRIYVGLENADALAAIDTATN V+AN+PIGQAPQAIAYVP AAPNPDDRQNLQ LGVA Sbjct: 313 DGTRIYVGLENADALAAIDTATNSVVANVPIGQAPQAIAYVPGAAPNPDDRQNLQALGVA 372 Query: 369 GQAAHLALAPKKEAKGEKPPT 389 GQ AHLALA + +K K PT Sbjct: 373 GQFAHLALASRDGSKDGKAPT 393 >gb|AAN40985.1| signal peptide protein [Bradyrhizobium japonicum] Length = 367 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/355 (87%), Positives = 336/355 (94%) Query: 9 LLATTVLAMSSSAFAGQAPGAASAPDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIR 68 LA T+LA S+A+AGQAPGA S+PDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIR Sbjct: 13 FLAATMLATGSAAWAGQAPGALSSPDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIR 72 Query: 69 LGDPQPGNFSPLYKGQVLVHGMGYSPDHRTLAVVSIGSNSVSFIDTATSSVKHVTYIGRS 128 LGDPQPGNFSPLYKGQVLVHGMG+SPDH+ LAVVSIGSNSV+FIDTAT++VKH TYIGRS Sbjct: 73 LGDPQPGNFSPLYKGQVLVHGMGFSPDHKMLAVVSIGSNSVTFIDTATNAVKHTTYIGRS 132 Query: 129 PHEAFFTPDGKEVWVTVRGENYISVIDAQSFKETTRIEVPAGPGMQIFSPDGKYGYICSS 188 PHEAFFTPDGKEVWVTVRGENYISVID QSF+E RI P+GPGMQ+FSPDGKY YICSS Sbjct: 133 PHEAFFTPDGKEVWVTVRGENYISVIDPQSFEERRRITTPSGPGMQMFSPDGKYAYICSS 192 Query: 189 FNPETDVVSVADHQIVAKVKQESPFCPNIAATPDGDQVWFTLKDVGRTQVFNAKPPFNPI 248 FNPETDVV+VA+H+I+AKVKQESPFCPNIA TPDG+QVWFTLKD GRTQVFNA+PPFNPI Sbjct: 193 FNPETDVVAVAEHKIIAKVKQESPFCPNIAVTPDGNQVWFTLKDTGRTQVFNARPPFNPI 252 Query: 249 KTIDTGPITNHVNFARTSKGTFAYVTIGGTNEVKVFRTDDFSQVATIPVGNLPHGVWPSG 308 +TIDTGPITNHVNFA T++GTFAYVTIGG N+VKVFRTDDFSQVATIPVGNLPHGVWPSG Sbjct: 253 RTIDTGPITNHVNFAHTARGTFAYVTIGGLNQVKVFRTDDFSQVATIPVGNLPHGVWPSG 312 Query: 309 DGTRIYVGLENADALAAIDTATNKVIANIPIGQAPQAIAYVPNAAPNPDDRQNLQ 363 DGTRIYVGLENADALAAIDTATN V+AN+PIGQAPQAIAYVP AAPNPDDRQNLQ Sbjct: 313 DGTRIYVGLENADALAAIDTATNSVVANVPIGQAPQAIAYVPGAAPNPDDRQNLQ 367 >ref|YP_003910345.1| 40-residue YVTN family beta-propeller repeat-containing protein [Burkholderia sp. CCGE1003] gb|ADN61054.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia sp. CCGE1003] Length = 492 Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust. Identities = 295/357 (82%), Positives = 323/357 (90%) Query: 20 SAFAGQAPGAASAPDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIRLGDPQPGNFSP 79 SA+AGQAPGAASAPDI +SHHDRVYAAEQFSNTVSVTDP DN+LLGVIRLGDP P NFSP Sbjct: 22 SAWAGQAPGAASAPDIAVSHHDRVYAAEQFSNTVSVTDPADNRLLGVIRLGDPSPTNFSP 81 Query: 80 LYKGQVLVHGMGYSPDHRTLAVVSIGSNSVSFIDTATSSVKHVTYIGRSPHEAFFTPDGK 139 LY+GQVLVHGMG+SPDH+T+AVVSIGSNSVSFIDTAT++VKHVTY+GRSPHEAFFTPDGK Sbjct: 82 LYRGQVLVHGMGFSPDHKTIAVVSIGSNSVSFIDTATNAVKHVTYVGRSPHEAFFTPDGK 141 Query: 140 EVWVTVRGENYISVIDAQSFKETTRIEVPAGPGMQIFSPDGKYGYICSSFNPETDVVSVA 199 EVWVTVRGENY+SV+DA +F+E TRI VPAGPGMQIFSPDGKYGY+CSSFNPETDV+SVA Sbjct: 142 EVWVTVRGENYVSVLDAATFEEKTRITVPAGPGMQIFSPDGKYGYVCSSFNPETDVISVA 201 Query: 200 DHQIVAKVKQESPFCPNIAATPDGDQVWFTLKDVGRTQVFNAKPPFNPIKTIDTGPITNH 259 DHQIVAKVKQ+SPFCPNIAA+PDG +VWFTLKDVGRTQVF A+PPF +KT+DTGPITNH Sbjct: 202 DHQIVAKVKQDSPFCPNIAASPDGKEVWFTLKDVGRTQVFEAQPPFRLLKTLDTGPITNH 261 Query: 260 VNFARTSKGTFAYVTIGGTNEVKVFRTDDFSQVATIPVGNLPHGVWPSGDGTRIYVGLEN 319 VN + S GTFAYVT+GG NEVKV+RT F QVATIPVGNLPHG+WPSGDGTR+YVGLEN Sbjct: 262 VNLVKNSNGTFAYVTVGGLNEVKVYRTGTFEQVATIPVGNLPHGIWPSGDGTRVYVGLEN 321 Query: 320 ADALAAIDTATNKVIANIPIGQAPQAIAYVPNAAPNPDDRQNLQGLGVAGQAAHLAL 376 DALAAIDT TNKVIA IPIGQAPQA+ YVP A P D QNLQ LGVAG HL L Sbjct: 322 GDALAAIDTLTNKVIAQIPIGQAPQAVTYVPGAVPEGDGTQNLQPLGVAGNTVHLHL 378 >ref|ZP_07028608.1| 40-residue YVTN family beta-propeller repeat protein [Afipia sp. 1NLS2] gb|EFI50031.1| 40-residue YVTN family beta-propeller repeat protein [Afipia sp. 1NLS2] Length = 484 Score = 625 bits (1611), Expect = e-177, Method: Compositional matrix adjust. Identities = 299/389 (76%), Positives = 336/389 (86%), Gaps = 1/389 (0%) Query: 1 MNRHILKSLLATTVLAMSSSAFAGQAPGAASAPDIPISHHDRVYAAEQFSNTVSVTDPVD 60 M + L +LLATT LA++ A+AGQAP AAS DIP+S HDRVYAAEQFSNTVSVTDP Sbjct: 1 MRINYLSALLATTFLAVAPVAWAGQAPFAASDKDIPVSSHDRVYAAEQFSNTVSVTDPAT 60 Query: 61 NKLLGVIRLGDPQPGNFSPLYKGQVLVHGMGYSPDHRTLAVVSIGSNSVSFIDTATSSVK 120 NKL+GVIRLG PQP N SPLY+GQVLVHGMG+SPD +TLAVVSIGSNSV+FIDTAT++VK Sbjct: 61 NKLVGVIRLGAPQPSNLSPLYRGQVLVHGMGFSPDRKTLAVVSIGSNSVTFIDTATNTVK 120 Query: 121 HVTYIGRSPHEAFFTPDGKEVWVTVRGENYISVIDAQSFKETTRIEVPAGPGMQIFSPDG 180 H TY+GRSPHEAFFTPDG EVWVTVRGE+Y+ V+D ++F+E TRI+ P GPGMQIFSPDG Sbjct: 121 HTTYLGRSPHEAFFTPDGGEVWVTVRGEDYVQVLDGKTFEEKTRIKTPNGPGMQIFSPDG 180 Query: 181 KYGYICSSFNPETDVVSVADHQIVAKVKQESPFCPNIAATPDGDQVWFTLKDVGRTQVFN 240 KYGY+CSSFNPET+V+SVADHQI+A+VKQ SPFCP+IAATPDG QVWFTLKD+G+TQVFN Sbjct: 181 KYGYVCSSFNPETEVISVADHQIIARVKQASPFCPDIAATPDGSQVWFTLKDIGKTQVFN 240 Query: 241 AKPPFNPIKTIDTGPITNHVNFARTSKGTFAYVTIGGTNEVKVFRTDDFSQVATIPVGNL 300 AKPPFN + T+DTGP TNHVNFA + GTFAYVTIGG NEVKVFRTDDF QVA IPVGNL Sbjct: 241 AKPPFNVLATLDTGPTTNHVNFAHNANGTFAYVTIGGLNEVKVFRTDDFKQVAAIPVGNL 300 Query: 301 PHGVWPSGDGTRIYVGLENADALAAIDTATNKVIANIPIGQAPQAIAYVPNAAPNPDDRQ 360 PHG+WPSGDG+RIYVGLENADALAAIDT TNKVIAN+PIGQAPQAI YVP A P D Sbjct: 301 PHGLWPSGDGSRIYVGLENADALAAIDTLTNKVIANVPIGQAPQAITYVPGAVPEGDGTA 360 Query: 361 NLQGLGVAGQAAHLALAPKKEAKGEKPPT 389 NLQ LG+AGQ AHL+LA K GEK T Sbjct: 361 NLQPLGLAGQIAHLSLA-KGGKDGEKTAT 388 >ref|YP_004156371.1| 40-residue yvtn family beta-propeller repeat-containing protein [Variovorax paradoxus EPS] gb|ADU38260.1| 40-residue YVTN family beta-propeller repeat protein [Variovorax paradoxus EPS] Length = 485 Score = 623 bits (1606), Expect = e-176, Method: Compositional matrix adjust. Identities = 298/370 (80%), Positives = 325/370 (87%) Query: 18 SSSAFAGQAPGAASAPDIPISHHDRVYAAEQFSNTVSVTDPVDNKLLGVIRLGDPQPGNF 77 +S A AGQAPGAA++ DIP+SH DR+YAAEQFSNTVSVTDPVDNKLLGVIRLGDP PGNF Sbjct: 19 TSFAHAGQAPGAAASADIPVSHRDRLYAAEQFSNTVSVTDPVDNKLLGVIRLGDPAPGNF 78 Query: 78 SPLYKGQVLVHGMGYSPDHRTLAVVSIGSNSVSFIDTATSSVKHVTYIGRSPHEAFFTPD 137 SPLYKGQVLVHGMG+SPDHRTLAVVSIGSNSV+FIDTAT++VKH TY+GRSPHEAFFTPD Sbjct: 79 SPLYKGQVLVHGMGFSPDHRTLAVVSIGSNSVTFIDTATNAVKHTTYVGRSPHEAFFTPD 138 Query: 138 GKEVWVTVRGENYISVIDAQSFKETTRIEVPAGPGMQIFSPDGKYGYICSSFNPETDVVS 197 GKEVWVTVRGENY+SVIDA +F+E TRI PAGPGMQIFSPDGKYGY+CSSFNPET V+ Sbjct: 139 GKEVWVTVRGENYVSVIDAATFEEKTRIVTPAGPGMQIFSPDGKYGYVCSSFNPETVVID 198 Query: 198 VADHQIVAKVKQESPFCPNIAATPDGDQVWFTLKDVGRTQVFNAKPPFNPIKTIDTGPIT 257 A QIV +VKQ+SPFCPNIAATPDG QVWFTLKDVGRT VF+AKPPF +K+ DTG IT Sbjct: 199 TATKQIVGRVKQDSPFCPNIAATPDGRQVWFTLKDVGRTMVFDAKPPFAVLKSFDTGAIT 258 Query: 258 NHVNFARTSKGTFAYVTIGGTNEVKVFRTDDFSQVATIPVGNLPHGVWPSGDGTRIYVGL 317 NHVNFA T KGTFAYVT+GG N+VKVFRTDDFSQVATIPVG LPHG+WPSGDG+RIYVGL Sbjct: 259 NHVNFAATKKGTFAYVTVGGLNQVKVFRTDDFSQVATIPVGKLPHGIWPSGDGSRIYVGL 318 Query: 318 ENADALAAIDTATNKVIANIPIGQAPQAIAYVPNAAPNPDDRQNLQGLGVAGQAAHLALA 377 ENADALA IDT TNKV+ +PIGQAPQAIAYVPNA P D Q LQ LGVAGQAAHL LA Sbjct: 319 ENADALAVIDTGTNKVVGEVPIGQAPQAIAYVPNAVPEGDGMQGLQPLGVAGQAAHLTLA 378 Query: 378 PKKEAKGEKP 387 + K P Sbjct: 379 AVQGDKAGAP 388