BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0022.0008.p         (172 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773126.1| hypothetical protein bll6486 [Bradyrhizobium ja...   182   2e-44
gb|AAN40986.1| putative signal peptide protein [Bradyrhizobium j...   172   1e-41
gb|EGP47262.1| hypothetical protein AXXA_05903 [Achromobacter xy...   166   1e-39
ref|YP_766746.1| hypothetical protein RL1136 [Rhizobium legumino...   164   5e-39
ref|YP_001862345.1| hypothetical protein Bphy_6259 [Burkholderia...   156   1e-36

>ref|NP_773126.1| hypothetical protein bll6486 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51751.1| bll6486 [Bradyrhizobium japonicum USDA 110]
          Length = 187

 Score =  182 bits (462), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/162 (64%), Positives = 118/162 (72%), Gaps = 11/162 (6%)

Query: 21  RFLRPGLAPLAAAALLAVAAAA---AFAHDDHHPAQ--SAQTAEESAFLAENDAAMTKMM 75
           R+ RPGL      A + VA A     FAH+ H PA   +A +AEE AFL EN++AM KMM
Sbjct: 27  RWPRPGLGMALIGARILVAFAIPPLVFAHEAH-PANPPAALSAEERAFLEENESAMAKMM 85

Query: 76  NDMAAKPSGDIDRDFVAMMAPHHQGAIDMAVIELRYGKNEQLRRIAQEIIVEQRQEIDAM 135
           NDMAAKP+GD+DRDFVAMM PHHQGAIDMAVIELRYGKNEQLRRIAQEIIV+Q QEI AM
Sbjct: 86  NDMAAKPTGDVDRDFVAMMNPHHQGAIDMAVIELRYGKNEQLRRIAQEIIVDQMQEIAAM 145

Query: 136 KLAIGDPVTASAPAPTQPGPAPAAAHDH-----MNTSHGMKN 172
           KLAIG+P T + PAPTQP   P A+  H     M+ S GMK 
Sbjct: 146 KLAIGEPATDTTPAPTQPPSGPVASVHHHPGMQMDMSAGMKK 187


>gb|AAN40986.1| putative signal peptide protein [Bradyrhizobium japonicum]
          Length = 177

 Score =  172 bits (437), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/162 (62%), Positives = 116/162 (71%), Gaps = 12/162 (7%)

Query: 21  RFLRPGLAPLAAAALLAVAAAA---AFAHDDHHPAQ--SAQTAEESAFLAENDAAMTKMM 75
           R+ RPGL      A + VA A     FAH+ H PA   +A +AEE AFL EN++AM KMM
Sbjct: 18  RWPRPGLGMALIGARILVAFAIPPLVFAHEAH-PANPPAALSAEERAFLEENESAMAKMM 76

Query: 76  NDMAAKPSGDIDRDFVAMMAPHHQGAIDMAVIELRYGKNEQLRRIAQEIIVEQRQEIDAM 135
           NDMAAKP+GD+D  FVAMM PHHQGAIDMAVIELRYGKNEQLRRIAQEIIV+Q QEI AM
Sbjct: 77  NDMAAKPTGDVD-AFVAMMNPHHQGAIDMAVIELRYGKNEQLRRIAQEIIVDQMQEIAAM 135

Query: 136 KLAIGDPVTASAPAPTQPGPAPAAAHDH-----MNTSHGMKN 172
           KLAIG+P T + PAPTQP   P A+  H     M+ S GMK 
Sbjct: 136 KLAIGEPATDTTPAPTQPPSGPVASVHHHPGMQMDMSAGMKK 177


>gb|EGP47262.1| hypothetical protein AXXA_05903 [Achromobacter xylosoxidans AXX-A]
          Length = 151

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 87/120 (72%), Positives = 98/120 (81%), Gaps = 3/120 (2%)

Query: 52  AQSAQTAEESAFLAENDAAMTKMMNDMAAKPSGDIDRDFVAMMAPHHQGAIDMAVIELRY 111
           +QSA +AEE+AFLAENDAAM +MM+ MA  PSGDID+DFVAMMAPHHQGAIDMA+ ELRY
Sbjct: 30  SQSAPSAEEAAFLAENDAAMNRMMDAMAPHPSGDIDQDFVAMMAPHHQGAIDMAMAELRY 89

Query: 112 GKNEQLRRIAQEIIVEQRQEIDAMKLAIGDPVTASAPAPTQPG---PAPAAAHDHMNTSH 168
           GKNEQLRRIAQEIIVEQ+QEI AM+LA+G P+  S PAP QP    PAPA A  H   SH
Sbjct: 90  GKNEQLRRIAQEIIVEQQQEIAAMRLALGQPLPESRPAPDQPADLRPAPAPAQSHHGASH 149


>ref|YP_766746.1| hypothetical protein RL1136 [Rhizobium leguminosarum bv. viciae
           3841]
 emb|CAK06633.1| conserved hypothetical exported protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 169

 Score =  164 bits (415), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/145 (60%), Positives = 101/145 (69%), Gaps = 3/145 (2%)

Query: 30  LAAAALLAVAAAAAFAHDD---HHPAQSAQTAEESAFLAENDAAMTKMMNDMAAKPSGDI 86
           LAAA L      AAFAHD     HPA+    + E+AFLAEN+ AM +MM DM  KP+GD+
Sbjct: 24  LAAAILATAGTCAAFAHDSAQHTHPAKLVADSTEAAFLAENNTAMDRMMADMEVKPTGDV 83

Query: 87  DRDFVAMMAPHHQGAIDMAVIELRYGKNEQLRRIAQEIIVEQRQEIDAMKLAIGDPVTAS 146
           DRDFVAMM PHHQGAIDMA+  L+YGKNEQL+RIAQEIIV+Q+QEI AMKLAIGDP+  S
Sbjct: 84  DRDFVAMMTPHHQGAIDMALAVLKYGKNEQLKRIAQEIIVDQQQEIAAMKLAIGDPLPPS 143

Query: 147 APAPTQPGPAPAAAHDHMNTSHGMK 171
             APTQ  P    A        GMK
Sbjct: 144 DAAPTQVAPETTPAESMQGMDPGMK 168


>ref|YP_001862345.1| hypothetical protein Bphy_6259 [Burkholderia phymatum STM815]
 gb|ACC75299.1| protein of unknown function DUF305 [Burkholderia phymatum STM815]
          Length = 164

 Score =  156 bits (395), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/156 (55%), Positives = 109/156 (69%), Gaps = 10/156 (6%)

Query: 19  LPRFLRPGLAPLAAAALLAVAAAAAFAHDDHHPAQSAQTA--EESAFLAENDAAMTKMMN 76
           +PR  R  L+ + A A+ A+  + AF           QTA  +E+ FLAE+D AMT+MM+
Sbjct: 5   VPRIARTILSVVIALAISALCDSPAFT-------AGLQTAASDEAPFLAESDTAMTRMMD 57

Query: 77  DMAAKPSGDIDRDFVAMMAPHHQGAIDMAVIELRYGKNEQLRRIAQEIIVEQRQEIDAMK 136
            M+ KP+GD+DRDFVAMM PHHQGAIDMA  ELRYG NEQLRRIAQEI+VEQ+QEI AM+
Sbjct: 58  GMSVKPTGDVDRDFVAMMVPHHQGAIDMAQAELRYGHNEQLRRIAQEIVVEQQQEIIAMR 117

Query: 137 LAIGDPVTASAPAPTQPGPAPA-AAHDHMNTSHGMK 171
           +A+G P+  SAPA  Q  PA A A H H  + HGM+
Sbjct: 118 VALGQPLPPSAPAADQQKPASAPATHSHPTSHHGMQ 153