BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0022.0004.p (406 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769095.1| isocitrate lyase [Bradyrhizobium japonicum USDA... 823 0.0 ref|YP_001205745.1| isocitrate lyase [Bradyrhizobium sp. ORS 278... 807 0.0 ref|YP_001240153.1| isocitrate lyase [Bradyrhizobium sp. BTAi1] ... 804 0.0 ref|YP_487802.1| isocitrate lyase [Rhodopseudomonas palustris Ha... 784 0.0 ref|YP_004110892.1| isocitrate lyase and phosphorylmutase [Rhodo... 781 0.0 >ref|NP_769095.1| isocitrate lyase [Bradyrhizobium japonicum USDA 110] dbj|BAC47720.1| isocitrate lyase [Bradyrhizobium japonicum USDA 110] Length = 592 Score = 823 bits (2126), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/406 (95%), Positives = 398/406 (98%) Query: 1 VPALIEELYTFLRQADSRELNDIFRALDAARKEGDKAREKTLIEKIDNFQTHVVPVIADI 60 VPALIEELYTFLRQADSRELNDIFR+LD ARKEGDK REK LIEKID FQTHVVPVIADI Sbjct: 187 VPALIEELYTFLRQADSRELNDIFRSLDKARKEGDKTREKELIEKIDGFQTHVVPVIADI 246 Query: 61 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHEVFIAKIRACRH 120 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPH+VF+AKIRACRH Sbjct: 247 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHDVFLAKIRACRH 306 Query: 121 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSHKPGDIGDQYNSFLDCEEVTAANARNGDVI 180 AFLELGVEDG++VTRTDSLGAGLTQQIAVSHKPGDIGDQYNSFLDCEE+TA NARNGDVI Sbjct: 307 AFLELGVEDGVVVTRTDSLGAGLTQQIAVSHKPGDIGDQYNSFLDCEEITAENARNGDVI 366 Query: 181 INQNGKMMRPKRLPSNLYQFRPGTGADRCVLDCITSLQNGADLLWIETEKPHIEQIASMV 240 IN+NGKMMRPKRLPSNLYQFRPGTG DRCVLDCITSLQNGADLLWIETEKPHIEQIA MV Sbjct: 367 INRNGKMMRPKRLPSNLYQFRPGTGEDRCVLDCITSLQNGADLLWIETEKPHIEQIAKMV 426 Query: 241 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSKYNRAELMKAEYDDTPLA 300 DRIR+V+PNAKLAYNNSPSFNWTLNFRWQVYDAMKEAG+DVSKYNRAELMKAEYDDTPLA Sbjct: 427 DRIREVVPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGKDVSKYNRAELMKAEYDDTPLA 486 Query: 301 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 360 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA Sbjct: 487 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 546 Query: 361 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGGTHNTMNQFG 406 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGG HNTMNQFG Sbjct: 547 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGGAHNTMNQFG 592 >ref|YP_001205745.1| isocitrate lyase [Bradyrhizobium sp. ORS 278] emb|CAL77519.1| isocitrate lyase [Bradyrhizobium sp. ORS 278] Length = 545 Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust. Identities = 382/406 (94%), Positives = 391/406 (96%) Query: 1 VPALIEELYTFLRQADSRELNDIFRALDAARKEGDKAREKTLIEKIDNFQTHVVPVIADI 60 VPALIEELYTFLRQADSRELND+FR LDAARK GDKA+E +I KID FQTHVVPVIADI Sbjct: 140 VPALIEELYTFLRQADSRELNDLFRTLDAARKAGDKAKETEIIAKIDGFQTHVVPVIADI 199 Query: 61 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHEVFIAKIRACRH 120 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPH+VF+AKIRACRH Sbjct: 200 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHDVFLAKIRACRH 259 Query: 121 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSHKPGDIGDQYNSFLDCEEVTAANARNGDVI 180 AFLELGVEDGIIVTRTDSLGAGLTQQIA S +PGD+GDQYNSFLDCEEVT AR+GDVI Sbjct: 260 AFLELGVEDGIIVTRTDSLGAGLTQQIAYSSQPGDLGDQYNSFLDCEEVTPETARSGDVI 319 Query: 181 INQNGKMMRPKRLPSNLYQFRPGTGADRCVLDCITSLQNGADLLWIETEKPHIEQIASMV 240 INQNGKM+RPKRLPSNLYQFRPGTG DRCVLDCITSLQNGADLLWIETEKPHIEQIA MV Sbjct: 320 INQNGKMVRPKRLPSNLYQFRPGTGEDRCVLDCITSLQNGADLLWIETEKPHIEQIAKMV 379 Query: 241 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSKYNRAELMKAEYDDTPLA 300 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSKYNRAELMKAEYDDTPLA Sbjct: 380 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSKYNRAELMKAEYDDTPLA 439 Query: 301 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 360 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA Sbjct: 440 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 499 Query: 361 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGGTHNTMNQFG 406 EIRQGIACVKHQNMAGSDIGDDHKEYFAGE ALKAGG HNTMNQFG Sbjct: 500 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEKALKAGGAHNTMNQFG 545 >ref|YP_001240153.1| isocitrate lyase [Bradyrhizobium sp. BTAi1] gb|ABQ36247.1| isocitrate lyase [Bradyrhizobium sp. BTAi1] Length = 545 Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/405 (93%), Positives = 392/405 (96%) Query: 1 VPALIEELYTFLRQADSRELNDIFRALDAARKEGDKAREKTLIEKIDNFQTHVVPVIADI 60 VPALIEELYTFLRQADSRELND+FR+LDAARK GDKA+E +I +ID FQTHVVPVIADI Sbjct: 140 VPALIEELYTFLRQADSRELNDLFRSLDAARKAGDKAKETEIIARIDGFQTHVVPVIADI 199 Query: 61 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHEVFIAKIRACRH 120 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPH+VF+AKIRACRH Sbjct: 200 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHDVFLAKIRACRH 259 Query: 121 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSHKPGDIGDQYNSFLDCEEVTAANARNGDVI 180 AFLELGVEDGIIVTRTDSLGAGLTQQIA S +PGD+GDQYNSFLDCEEVT NARNGDVI Sbjct: 260 AFLELGVEDGIIVTRTDSLGAGLTQQIAFSSQPGDLGDQYNSFLDCEEVTPGNARNGDVI 319 Query: 181 INQNGKMMRPKRLPSNLYQFRPGTGADRCVLDCITSLQNGADLLWIETEKPHIEQIASMV 240 IN++GKM+RPKRLPSNLYQFRPGTG DRCVLDCITSLQNGADLLWIETEKPHIEQIA MV Sbjct: 320 INRDGKMLRPKRLPSNLYQFRPGTGEDRCVLDCITSLQNGADLLWIETEKPHIEQIAKMV 379 Query: 241 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSKYNRAELMKAEYDDTPLA 300 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVS+YNRAELMKAEYDDTPLA Sbjct: 380 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSRYNRAELMKAEYDDTPLA 439 Query: 301 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 360 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA Sbjct: 440 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 499 Query: 361 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGGTHNTMNQF 405 EIRQGIACVKHQNMAGSDIGDDHKEYFAGE ALKAGG HNTMNQF Sbjct: 500 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEKALKAGGAHNTMNQF 544 >ref|YP_487802.1| isocitrate lyase [Rhodopseudomonas palustris HaA2] gb|ABD08891.1| isocitrate lyase [Rhodopseudomonas palustris HaA2] Length = 545 Score = 784 bits (2024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 371/406 (91%), Positives = 388/406 (95%) Query: 1 VPALIEELYTFLRQADSRELNDIFRALDAARKEGDKAREKTLIEKIDNFQTHVVPVIADI 60 VPALIEELYTFLRQAD+RELN IFR LDAARK GDKA+E LIEKIDNFQTHVVPVIADI Sbjct: 140 VPALIEELYTFLRQADARELNTIFRDLDAARKAGDKAKETALIEKIDNFQTHVVPVIADI 199 Query: 61 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHEVFIAKIRACRH 120 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHEVF+AKIRACRH Sbjct: 200 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHEVFLAKIRACRH 259 Query: 121 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSHKPGDIGDQYNSFLDCEEVTAANARNGDVI 180 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSH PGDIGDQYNSFLDCEEV + NGDVI Sbjct: 260 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSHAPGDIGDQYNSFLDCEEVDVTSVGNGDVI 319 Query: 181 INQNGKMMRPKRLPSNLYQFRPGTGADRCVLDCITSLQNGADLLWIETEKPHIEQIASMV 240 I++ GK++RPKRLPSNLYQFR GTGADRCVLDCITSLQNGADLLWIETEKP+I QIASMV Sbjct: 320 ISREGKLLRPKRLPSNLYQFREGTGADRCVLDCITSLQNGADLLWIETEKPNIAQIASMV 379 Query: 241 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSKYNRAELMKAEYDDTPLA 300 DRIR+VIPNAKLAYNNSPSFNWTLNFRWQVYD MK AG+DVS+YNRAELMKAEYD+TPLA Sbjct: 380 DRIREVIPNAKLAYNNSPSFNWTLNFRWQVYDEMKAAGKDVSQYNRAELMKAEYDETPLA 439 Query: 301 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 360 KEADE+IRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLA+EYFGEQGMLGYVKNVQR Sbjct: 440 KEADEKIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAKEYFGEQGMLGYVKNVQRQ 499 Query: 361 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGGTHNTMNQFG 406 EIRQGIACVKHQ+MAGS+IGDDHKEYFAGEAALKAGG HNTMNQFG Sbjct: 500 EIRQGIACVKHQDMAGSNIGDDHKEYFAGEAALKAGGAHNTMNQFG 545 >ref|YP_004110892.1| isocitrate lyase and phosphorylmutase [Rhodopseudomonas palustris DX-1] gb|ADU46159.1| isocitrate lyase and phosphorylmutase [Rhodopseudomonas palustris DX-1] Length = 546 Score = 781 bits (2018), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/405 (91%), Positives = 385/405 (95%) Query: 1 VPALIEELYTFLRQADSRELNDIFRALDAARKEGDKAREKTLIEKIDNFQTHVVPVIADI 60 VPALIEE+YTFLRQADSRELNDIFR LDAARKEGDKA+E LIEKIDNFQTHVVP+IADI Sbjct: 141 VPALIEEIYTFLRQADSRELNDIFRQLDAARKEGDKAKEAALIEKIDNFQTHVVPIIADI 200 Query: 61 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHEVFIAKIRACRH 120 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPH+VFIAK+RA RH Sbjct: 201 DAGFGNAEATYLLAKKMIEAGACALQIENQVSDEKQCGHQDGKVTVPHDVFIAKVRAVRH 260 Query: 121 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSHKPGDIGDQYNSFLDCEEVTAANARNGDVI 180 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSH+PGDIGDQYNSFLDCEEV NGDV+ Sbjct: 261 AFLELGVEDGIIVTRTDSLGAGLTQQIAVSHQPGDIGDQYNSFLDCEEVDVTKVGNGDVV 320 Query: 181 INQNGKMMRPKRLPSNLYQFRPGTGADRCVLDCITSLQNGADLLWIETEKPHIEQIASMV 240 I++NGK++RPKRLPSNLYQFRPGTG DRCVLDCITSLQNGADLLWIETEKPHIEQIA MV Sbjct: 321 ISRNGKLLRPKRLPSNLYQFRPGTGEDRCVLDCITSLQNGADLLWIETEKPHIEQIAGMV 380 Query: 241 DRIRKVIPNAKLAYNNSPSFNWTLNFRWQVYDAMKEAGQDVSKYNRAELMKAEYDDTPLA 300 DRIR+VIPNAKLAYNNSPSFNWTLNFRWQVYDA K G+DVSKYNRAELMKAEYDDT LA Sbjct: 381 DRIREVIPNAKLAYNNSPSFNWTLNFRWQVYDAWKAEGKDVSKYNRAELMKAEYDDTALA 440 Query: 301 KEADERIRTFQADSAKRAGIFHHLITLPTYHTAALSTDNLAREYFGEQGMLGYVKNVQRA 360 EAD RIRTFQAD+AKRAGIFHHLITLPTYHTAALSTDNLA+EYFG+QGMLGYVKNVQR Sbjct: 441 IEADARIRTFQADAAKRAGIFHHLITLPTYHTAALSTDNLAKEYFGDQGMLGYVKNVQRQ 500 Query: 361 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGGTHNTMNQF 405 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGG HNTMNQF Sbjct: 501 EIRQGIACVKHQNMAGSDIGDDHKEYFAGEAALKAGGAHNTMNQF 545