BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0011.p (344 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004109597.1| ABC transporter substrate-binding protein [R... 270 3e-70 ref|YP_998039.1| ABC transporter substrate-binding protein [Verm... 248 2e-63 ref|YP_998273.1| ABC transporter substrate-binding protein [Verm... 238 8e-61 ref|YP_001240759.1| putative ABC transporter ribose binding prot... 230 3e-58 ref|NP_774508.1| ABC transporter substrate-binding protein [Brad... 223 3e-56 >ref|YP_004109597.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris DX-1] gb|ADU44864.1| ABC transporter substrate-binding protein [Rhodopseudomonas palustris DX-1] Length = 340 Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 139/305 (45%), Positives = 192/305 (62%), Gaps = 3/305 (0%) Query: 39 ELRAVYDKALQGKTIAYLPIALGVPLSDEWGRVLQEEAEWRGMKYVVRDPNNNPSAMQQA 98 +L + KA++GKT+A++P+ LGV L EW RV++ + G+K V+RDPN QA Sbjct: 39 QLFEKFQKAVKGKTVAWVPVWLGV-LESEWTRVMKAHFDDYGIKMVMRDPNLKSDVQLQA 97 Query: 99 LTALVDQKPDVLVVQNPSVTLLMKDLKRAESQGTHVIQINMSSNYKSGAFVGADWREIGK 158 +++L++ KPD+L+VQNP+ TLL ++LKRA G VIQ+NM+SN + A+VGAD ++G+ Sbjct: 98 VSSLINDKPDILIVQNPTTTLLARELKRAMDSGIKVIQVNMASNQLTDAYVGADVPKLGR 157 Query: 159 MLANEAVKACGTGSGKSGKVQIVQGELTAAASVDQVGGIMEVLNKDPNIKVVSNQAANWD 218 MLA E VK CG G G SGK+ I+Q E TAA S+D V M+V D +I VVS+Q NWD Sbjct: 158 MLAEEVVKTCGGGKG-SGKIAILQSEATAAYSLDMVKAAMQVFKGDKSINVVSSQPTNWD 216 Query: 219 ANTALNVTATVIQQHPDLCASIGFWGIMESGAAQAIRNAGKIDDVKVFASGEGSQLDCDQ 278 AN A + V+QQHPDLC + WG +GAAQ ++NAGK VK+F + +G DCD Sbjct: 217 ANKASEIVTNVLQQHPDLCGILSVWGPQTAGAAQVVKNAGKQGQVKIFVASDGQPADCDM 276 Query: 279 VNSGNFYKFLSYKATEQGHDLMFAAETLLVSGEKPGGRNLVYYTRPIWLDKSNASGANCF 338 + G F K LSY+A QG ++ A TLL G L YYT W+ + CF Sbjct: 277 LEQGLFTKNLSYRADTQGEAIVNAVLTLLQDPRPAGSTQLAYYTTNYWVSGKD-DRQYCF 335 Query: 339 ALPKK 343 +PK+ Sbjct: 336 IVPKE 340 >ref|YP_998039.1| ABC transporter substrate-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM59021.1| ABC transporter substrate-binding protein [Verminephrobacter eiseniae EF01-2] Length = 341 Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 130/292 (44%), Positives = 179/292 (61%) Query: 47 ALQGKTIAYLPIALGVPLSDEWGRVLQEEAEWRGMKYVVRDPNNNPSAMQQALTALVDQK 106 AL+GKTIAYLPI+LG L+ WG V+++EA+ GMK++ +DPN + AM Q +T+L+ QK Sbjct: 40 ALRGKTIAYLPISLGFDLAQAWGGVIKQEADRYGMKFISQDPNWSTDAMAQGMTSLIAQK 99 Query: 107 PDVLVVQNPSVTLLMKDLKRAESQGTHVIQINMSSNYKSGAFVGADWREIGKMLANEAVK 166 PDV+V QNP + L + LK+A + G HVIQ+NM ++ AFVG D+ +G+ +A+ VK Sbjct: 100 PDVIVTQNPDLQSLARLLKQANAAGIHVIQMNMQGAVQTDAFVGPDFIALGQQVAHMMVK 159 Query: 167 ACGTGSGKSGKVQIVQGELTAAASVDQVGGIMEVLNKDPNIKVVSNQAANWDANTALNVT 226 ACG G+ S K+ IVQG +T S QV GI +VL ++P++K+VS+QAA+WDA A +T Sbjct: 160 ACGKGTNTSHKISIVQGVVTGGVSYYQVQGIKKVLAENPDLKLVSSQAADWDATKARAIT 219 Query: 227 ATVIQQHPDLCASIGFWGIMESGAAQAIRNAGKIDDVKVFASGEGSQLDCDQVNSGNFYK 286 TV+QQ+PDLC I W +G AI AGK V SG G+Q CD++N G F Sbjct: 220 ETVLQQNPDLCGVIDVWDGQAAGTGAAIVQAGKKGKVYFVTSGGGAQSTCDRLNDGIFSA 279 Query: 287 FLSYKATEQGHDLMFAAETLLVSGEKPGGRNLVYYTRPIWLDKSNASGANCF 338 ++Y A G D A LL + K G Y+ L KS CF Sbjct: 280 VINYDAVGMGRDAFTAISALLQTKAKAGTLKFQLYSPTRVLTKSEVKDGTCF 331 >ref|YP_998273.1| ABC transporter substrate-binding protein [Verminephrobacter eiseniae EF01-2] gb|ABM59255.1| ABC transporter substrate-binding protein [Verminephrobacter eiseniae EF01-2] Length = 337 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 134/303 (44%), Positives = 180/303 (59%), Gaps = 5/303 (1%) Query: 40 LRAVYDKALQGKTIAYLPIALGVPLSDEWGRVLQEEAEWRGMKYVVRDPNNNPSAMQQAL 99 R Y KAL GKT+ ++P+A+G L++ W L++E E GMK V+RDPN N A QA Sbjct: 34 FRDGYKKALAGKTVGFIPVAMGFDLTNGWYLGLKKELEPSGMKVVLRDPNWNTGAGAQAF 93 Query: 100 TALVDQKPDVLVVQNPSVTLLMKDLKRAESQGTHVIQINMSSNYKSGAFVGADWREIGKM 159 TAL+ +KP V+VV NP V K + +AE++G +V+QINM S S FVGADW ++G+ Sbjct: 94 TALIAEKPAVIVVHNPDVQTYAKLITKAEAEGIYVVQINMRSAQPSTVFVGADWIDVGER 153 Query: 160 LANEAVKACGTGSGKSGKVQIVQGELTAAASVDQVGGIMEVLNKDPNIKVVSNQAANWDA 219 A ++AC GKS K+ IVQG TAA S + G+ VL K+P +K+VSNQAA+WDA Sbjct: 154 GATAVMQAC---QGKSNKIAIVQGAPTAATSAYTLKGVENVLAKNPQLKLVSNQAADWDA 210 Query: 220 NTALNVTATVIQQHPDLCASIGFWGIMESGAAQAIRNAGKIDDVKVFASGEGSQLD-CDQ 278 A +T TV++QHPDLC +GFW M+ G A AI+ AG V + SG G Q CDQ Sbjct: 211 TKAKALTQTVLKQHPDLCGIVGFWDGMDIGTAAAIKEAGLTGKVFLATSGGGEQKSACDQ 270 Query: 279 VNSGNFYKFLSYKATEQGHDLMFAAETLLVSGEKPGGRNLVYYTRPIWLDKSNASG-ANC 337 V SG F +SY Q ++ + L+ G KPG YT + + K NA C Sbjct: 271 VKSGAFDYLVSYDVPTQASNMAAMIKWLVQGGVKPGAARQNIYTTLLPITKENAGAEGTC 330 Query: 338 FAL 340 + L Sbjct: 331 WKL 333 >ref|YP_001240759.1| putative ABC transporter ribose binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ36853.1| monosaccharide ABC transporter substrate-binding protein, CUT2 family [Bradyrhizobium sp. BTAi1] Length = 339 Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 125/292 (42%), Positives = 171/292 (58%) Query: 47 ALQGKTIAYLPIALGVPLSDEWGRVLQEEAEWRGMKYVVRDPNNNPSAMQQALTALVDQK 106 AL+GK+I YLPI++G L+ WG V++ EAE GMK+ +DPN N AM Q LT+L+ +K Sbjct: 38 ALKGKSIVYLPISIGFDLAQAWGGVVKTEAERYGMKFKSQDPNWNTGAMAQGLTSLIAEK 97 Query: 107 PDVLVVQNPSVTLLMKDLKRAESQGTHVIQINMSSNYKSGAFVGADWREIGKMLANEAVK 166 PDV+V QNP + L + LK+A + G VIQ+NM ++ AFVG D+ +G+ A V Sbjct: 98 PDVIVTQNPDLQSLARLLKQANAAGIVVIQMNMQGAVQTDAFVGPDFIAMGEQAAKMVVA 157 Query: 167 ACGTGSGKSGKVQIVQGELTAAASVDQVGGIMEVLNKDPNIKVVSNQAANWDANTALNVT 226 CG G+ S KV IVQG LT S QV GI +V +P IKVVS+QAA+WDA+ A +T Sbjct: 158 KCGKGTETSHKVSIVQGVLTGGVSYYQVQGIKKVFEANPEIKVVSSQAADWDASKARAIT 217 Query: 227 ATVIQQHPDLCASIGFWGIMESGAAQAIRNAGKIDDVKVFASGEGSQLDCDQVNSGNFYK 286 TV+QQ+PDLC I W G AI+ AGK D V SG G+Q CD++ G F Sbjct: 218 ETVLQQNPDLCGVIDVWDGQGVGTGAAIKQAGKQDQVYFVTSGGGAQSMCDRLADGTFSA 277 Query: 287 FLSYKATEQGHDLMFAAETLLVSGEKPGGRNLVYYTRPIWLDKSNASGANCF 338 ++Y A G D A +L + +K G Y+ + K++ C+ Sbjct: 278 AINYDAPGMGRDAFTAISAVLQAKQKAGTMKFQLYSPTRVMTKADVKAGTCW 329 >ref|NP_774508.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC53133.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 338 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 136/299 (45%), Positives = 185/299 (61%), Gaps = 5/299 (1%) Query: 44 YDKALQGKTIAYLPIALGVPLSDEWGRVLQEEAEWRGMKYVVRDPNNNPSAMQQALTALV 103 + +AL GKT+AY+P+A+ L++ W L++E E G+K+V+RD N N +A QA+T+L+ Sbjct: 38 FKEALAGKTVAYVPVAMNFDLTEGWYAGLKKELEPLGVKFVIRDANWNTNAGAQAVTSLI 97 Query: 104 DQKPDVLVVQNPSVTLLMKDLKRAESQGTHVIQINMSSNYKSGAFVGADWREIGKMLANE 163 +KP V+VV NP V K L+RAE++G +VIQINM S Y+S AFVGA+W EIG+ Sbjct: 98 SEKPAVMVVHNPDVQTYAKLLQRAENEGIYVIQINMGSAYRSSAFVGANWVEIGERQTEG 157 Query: 164 AVKACGTGSGKSGKVQIVQGELTAAASVDQVGGIMEVLNKDPNIKVVSNQAANWDANTAL 223 VKAC GKS K+ I+QG L+AAAS + G+ VL K P IKVVS+QAA+WDA A Sbjct: 158 VVKAC---EGKSNKIAIIQGALSAAASAYTLKGVENVLAKHPEIKVVSSQAADWDAAKAK 214 Query: 224 NVTATVIQQHPDLCASIGFWGIMESGAAQAIRNAGKIDDVKVFASGEGSQLD-CDQVNSG 282 +T TV++Q+PDLC +GFW M+ G A A++ AG V + SG G + C+ V SG Sbjct: 215 AITQTVLKQNPDLCGIVGFWDGMDIGTAAAVKEAGLTGKVFLATSGGGERKGACELVKSG 274 Query: 283 NFYKFLSYKATEQGHDLMFAAETLLVSGEKPGGRNLVYYTRPIWLDKSNA-SGANCFAL 340 F +SY Q + + LL SG KPG YT I + K NA S C+ L Sbjct: 275 AFDLNMSYDVPTQAAQMAGTIKWLLSSGVKPGSVKGSEYTTLIPITKENADSQTACWNL 333