BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0021.0005.p (290 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_768896.1| oxidoreductase [Bradyrhizobium japonicum USDA 1... 504 e-141 ref|YP_001412933.1| short-chain dehydrogenase/reductase SDR [Par... 365 4e-99 ref|YP_587083.1| short-chain dehydrogenase/reductase SDR [Cupria... 249 3e-64 ref|YP_295407.1| Short-chain dehydrogenase/reductase SDR [Ralsto... 241 9e-62 ref|YP_586777.1| short-chain dehydrogenase; 3-oxoacyl-ACP reduct... 228 7e-58 >ref|NP_768896.1| oxidoreductase [Bradyrhizobium japonicum USDA 110] dbj|BAC47521.1| hypothetical oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 291 Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust. Identities = 247/283 (87%), Positives = 261/283 (92%) Query: 8 SQEAKQDTKPERYVRPLSAESSGTAPGRGRLNGRRILVVGGGQRVFDAATDPIGNGRAMS 67 ++ + +TKPERYVRP SAES G APGRGRL+GRRIL+VGGGQRVFDA TDPIGNGRAMS Sbjct: 9 AEMTETETKPERYVRPPSAESLGEAPGRGRLSGRRILIVGGGQRVFDALTDPIGNGRAMS 68 Query: 68 LLFAREGAHVAVADLNRTSAEDTVARIADDGGRAFAIAADVTQEADVIRMIDEAHRTMGG 127 +L AREGA VAVADLNRTSAE TV RI GG AFAIAADVT E DV+RMIDEAHR MGG Sbjct: 69 ILCAREGAKVAVADLNRTSAEQTVKRITAAGGEAFAIAADVTSEPDVVRMIDEAHRAMGG 128 Query: 128 LDGMVLNIGTFGKTGLDNVSAEEWNRIYDVNVRGPMLCCRAALPKFEDGGSIVFISSIAA 187 LDGMVLNIGTFGK GLD VS EEWNRIYDVNVRGPMLCCRAA+P+F+DGG+IVFISSIAA Sbjct: 129 LDGMVLNIGTFGKVGLDAVSPEEWNRIYDVNVRGPMLCCRAAMPRFDDGGAIVFISSIAA 188 Query: 188 LKAGSQMAVYDSSKAALGGLMRNIAHTGARRGIRANLVYPGLVDTPNGREAGAGRPSRGK 247 LKAGSQMAVYDSSKAALGGLMRNIAH GARRGIRANLVYPGLVDTPNGREAGAGRPSRGK Sbjct: 189 LKAGSQMAVYDSSKAALGGLMRNIAHLGARRGIRANLVYPGLVDTPNGREAGAGRPSRGK 248 Query: 248 GHIPFGRQATAWEIAYAVLFFMSDESVYVTAQTLAVDSGLSGM 290 GH+PFGRQATAWEIAYAVLFF+SDESVYVTAQTLAVDSGLSGM Sbjct: 249 GHVPFGRQATAWEIAYAVLFFLSDESVYVTAQTLAVDSGLSGM 291 >ref|YP_001412933.1| short-chain dehydrogenase/reductase SDR [Parvibaculum lavamentivorans DS-1] gb|ABS63276.1| short-chain dehydrogenase/reductase SDR [Parvibaculum lavamentivorans DS-1] Length = 279 Score = 365 bits (938), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 180/277 (64%), Positives = 218/277 (78%), Gaps = 1/277 (0%) Query: 15 TKPERYVRPLSAESSGTAPGRGRLNGRRILVVGGGQRVFDAATDPIGNGRAMSLLFAREG 74 T E YVRPL AES G APGRGRL GR ILVVGGGQRV DAATDP+GNGRAMSLLFAREG Sbjct: 2 TAKEGYVRPLPAESEGRAPGRGRLQGRSILVVGGGQRVLDAATDPVGNGRAMSLLFAREG 61 Query: 75 AHVAVADLNRTSAEDTVARIADDGGRAFAIAADVTQEADVIRMIDEAHRTMGGLDGMVLN 134 A VAVAD+N SAE+TVA+I +GG+ AI AD+++ D+ M+ EA + +G +DG+VLN Sbjct: 62 AEVAVADINLPSAEETVAQIVGEGGKGHAIKADISKPDDITAMLQEAEKVLGKIDGLVLN 121 Query: 135 IGTFGKTGLDNV-SAEEWNRIYDVNVRGPMLCCRAALPKFEDGGSIVFISSIAALKAGSQ 193 +G + E+W+++ +N+RGPMLCC+AALPK DG +VFISSIA L AGS+ Sbjct: 122 VGIGAGGLGLEGATPEDWDKVLAINLRGPMLCCKAALPKLADGSPVVFISSIAGLIAGSR 181 Query: 194 MAVYDSSKAALGGLMRNIAHTGARRGIRANLVYPGLVDTPNGREAGAGRPSRGKGHIPFG 253 + YD+SKAALGGLMR++A G++RGIRAN+V PGLVDTP GR A GRPSRG+ +PFG Sbjct: 182 LPAYDASKAALGGLMRHVALEGSKRGIRANIVAPGLVDTPLGRVATQGRPSRGRTPVPFG 241 Query: 254 RQATAWEIAYAVLFFMSDESVYVTAQTLAVDSGLSGM 290 RQAT WEIAYA LF +SDESVYVTAQTLAVDSGL+G+ Sbjct: 242 RQATGWEIAYAALFLVSDESVYVTAQTLAVDSGLTGI 278 >ref|YP_587083.1| short-chain dehydrogenase/reductase SDR [Cupriavidus metallidurans CH34] gb|ABF11814.1| putative short-chain dehydrogenase/reductase SDR [Cupriavidus metallidurans CH34] Length = 269 Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 132/253 (52%), Positives = 168/253 (66%) Query: 36 GRLNGRRILVVGGGQRVFDAATDPIGNGRAMSLLFAREGAHVAVADLNRTSAEDTVARIA 95 G L G+RILVVGGGQ + +P GNGRA L AREGAHVA AD + +A+ TVARIA Sbjct: 8 GTLAGKRILVVGGGQGGDEQMDEPAGNGRAACCLLAREGAHVACADRSGAAAQRTVARIA 67 Query: 96 DDGGRAFAIAADVTQEADVIRMIDEAHRTMGGLDGMVLNIGTFGKTGLDNVSAEEWNRIY 155 DGGRA AI ADV++ AD+ MID+A +GGLD +VLN+G + L ++ E W+ + Sbjct: 68 ADGGRAAAIEADVSRTADIHAMIDQAVEALGGLDALVLNVGISHRLPLARLTEESWDAVL 127 Query: 156 DVNVRGPMLCCRAALPKFEDGGSIVFISSIAALKAGSQMAVYDSSKAALGGLMRNIAHTG 215 +N++ MLC + ALP+ +GG+IVF+SS+AA + + Y+ SKA LG L R A G Sbjct: 128 GINLKAHMLCVQVALPRMTEGGAIVFVSSVAARRPNGRNPAYEVSKAGLGALCRAAALEG 187 Query: 216 ARRGIRANLVYPGLVDTPNGREAGAGRPSRGKGHIPFGRQATAWEIAYAVLFFMSDESVY 275 GIRAN+V GL+DTP GR A A RP R +PFGRQ TAWE+A A+ F +SDES Y Sbjct: 188 QPSGIRANVVMLGLIDTPMGRAASAARPDRTSAPLPFGRQGTAWEVAAAIRFLVSDESRY 247 Query: 276 VTAQTLAVDSGLS 288 V A L VD GLS Sbjct: 248 VNAIELPVDGGLS 260 >ref|YP_295407.1| Short-chain dehydrogenase/reductase SDR [Ralstonia eutropha JMP134] gb|AAZ60563.1| Short-chain dehydrogenase/reductase SDR [Ralstonia eutropha JMP134] Length = 285 Score = 241 bits (615), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 129/275 (46%), Positives = 172/275 (62%) Query: 14 DTKPERYVRPLSAESSGTAPGRGRLNGRRILVVGGGQRVFDAATDPIGNGRAMSLLFARE 73 D+ R + L A + GT GRL GRRILVVG GQR +GNGRAMS+LFARE Sbjct: 3 DSLQLRPDQQLFAPALGTVRREGRLAGRRILVVGAGQRQTVDQVPSVGNGRAMSVLFARE 62 Query: 74 GAHVAVADLNRTSAEDTVARIADDGGRAFAIAADVTQEADVIRMIDEAHRTMGGLDGMVL 133 GA V AD++ +A+ TV IA +GGR F + ADV+ A ++RM+ EA M GLDG+V+ Sbjct: 63 GAAVTCADIDPGAAQGTVDWIAREGGRGFVVQADVSDPAQIVRMVREAASAMDGLDGLVV 122 Query: 134 NIGTFGKTGLDNVSAEEWNRIYDVNVRGPMLCCRAALPKFEDGGSIVFISSIAALKAGSQ 193 N+G + + + +W+R+ D+N+R PM C + A G ++VF++S AA+ S Sbjct: 123 NVGIGNQNRFGSENPADWDRVQDLNLRAPMFCAQEAAAVMPPGSAVVFVASTAAISPLSG 182 Query: 194 MAVYDSSKAALGGLMRNIAHTGARRGIRANLVYPGLVDTPNGREAGAGRPSRGKGHIPFG 253 + Y+SSKA L L R +A G G+RAN++ PGL+DTP GR+A RPSR +PFG Sbjct: 183 LPAYESSKAGLMALGRAVAFAGQGTGLRANVLAPGLIDTPMGRDASRARPSRAARPLPFG 242 Query: 254 RQATAWEIAYAVLFFMSDESVYVTAQTLAVDSGLS 288 RQ T WE+A A LF +S ES YV Q L VD GLS Sbjct: 243 RQGTGWEVANAALFLISAESSYVNGQMLVVDGGLS 277 >ref|YP_586777.1| short-chain dehydrogenase; 3-oxoacyl-ACP reductase [Cupriavidus metallidurans CH34] gb|ABF11508.1| short-chain dehydrogenase; putative 3-oxoacyl-(acyl-carrier-protein) reductase [Cupriavidus metallidurans CH34] Length = 317 Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 129/258 (50%), Positives = 162/258 (62%) Query: 31 TAPGRGRLNGRRILVVGGGQRVFDAATDPIGNGRAMSLLFAREGAHVAVADLNRTSAEDT 90 T P GRL GRRILVVG GQRV D P+GNGRA+SLLFAREGA + D++ + +T Sbjct: 53 TPPAGGRLAGRRILVVGAGQRVIDDPDPPVGNGRAISLLFAREGATLTCVDISEPAVAET 112 Query: 91 VARIADDGGRAFAIAADVTQEADVIRMIDEAHRTMGGLDGMVLNIGTFGKTGLDNVSAEE 150 + D G FA ADV + + +++ A R MGGLDG+V+ +G +D A Sbjct: 113 CRQAKDLGATVFAEVADVERAETIAPLVERAARQMGGLDGLVMVVGISSALPIDKQDANT 172 Query: 151 WNRIYDVNVRGPMLCCRAALPKFEDGGSIVFISSIAALKAGSQMAVYDSSKAALGGLMRN 210 W+R Y VNVR ML + A+ E G SIV +SS+AAL+ S Y+SSKAA L R+ Sbjct: 173 WDREYAVNVRSNMLFAQQAMRHMEPGSSIVLMSSLAALRNSSGNPAYESSKAAQVALARS 232 Query: 211 IAHTGARRGIRANLVYPGLVDTPNGREAGAGRPSRGKGHIPFGRQATAWEIAYAVLFFMS 270 IA G ++GIR N + PGL+DTP GR A A RP+R G +PFGRQ T WE+AYA LF MS Sbjct: 233 IAMAGQKQGIRCNSLLPGLMDTPMGRAATARRPARVGGALPFGRQGTGWEVAYACLFLMS 292 Query: 271 DESVYVTAQTLAVDSGLS 288 ES YV A L VD GL+ Sbjct: 293 HESSYVNAHALQVDGGLA 310