BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0055.p (331 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_04680558.1| oligopeptide/dipeptide ABC transporter, ATP-b... 385 e-105 ref|YP_001370384.1| oligopeptide/dipeptide ABC transporter ATPas... 381 e-104 ref|YP_765516.1| putative ATP-binding component of ABC transport... 375 e-102 ref|YP_001203705.1| putative oligopeptide ABC transporter ATP bi... 370 e-100 ref|ZP_06894799.1| ABC superfamily ATP binding cassette transpor... 365 5e-99 >ref|ZP_04680558.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein [Ochrobactrum intermedium LMG 3301] gb|EEQ96064.1| oligopeptide/dipeptide ABC transporter, ATP-binding protein [Ochrobactrum intermedium LMG 3301] Length = 329 Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust. Identities = 194/320 (60%), Positives = 233/320 (72%), Gaps = 1/320 (0%) Query: 1 VKGALLLAEGLAKAYPSQGSLFAPRSRVLAVDGISISLNKGETLGLVGESGCGKSTLGRL 60 + AL+ A L K Y S+ LFA V AVDG+S+S+ TLG+VGESG GKST GRL Sbjct: 1 MTAALIEARDLVKTYTSRKGLFAQPVAVRAVDGLSLSVAPATTLGIVGESGSGKSTTGRL 60 Query: 61 LLGLEKPDEGCVTFDNEVMPPSQAAAWRRLRARMQLVYQDPLGALDARLSVAEQVGEPLG 120 LLGLE P EG VTF+ +P + A+WR LRARMQLVYQDPL ALD RL + Q+ EPL Sbjct: 61 LLGLEDPSEGEVTFEGSALPRQKTASWRALRARMQLVYQDPLAALDRRLPIGRQIAEPLE 120 Query: 121 IHGIGSPAKRKARVGALLALVGLSEQHGARLPHELSGGQRQRVVLARALATSPDLLVCDE 180 IHGIG+P +RKARV L+ VGL +R PHELSGGQRQRVV+ARA+A+ P L+VCDE Sbjct: 121 IHGIGTPDERKARVAELMRAVGLRPDQASRYPHELSGGQRQRVVIARAIASRPQLIVCDE 180 Query: 181 PISALDVSIQAQVINLFMDIQQKFEVAMIFISHDLRAVRQISQRVAVMYLGRIVEEGIAD 240 P+SALDVSIQAQV+NL D+Q++ +AM+FISHDL+ VR IS RVAVMYLGRIVEE +D Sbjct: 181 PVSALDVSIQAQVVNLLRDLQEREGIAMVFISHDLKVVRNISDRVAVMYLGRIVEEASSD 240 Query: 241 DILHTPLHPYTRALVSAIPDVRKPRTRRTILAGDPPNPADRPGGCEFHPRCPVAISACSN 300 ++ PLHPYT+ALVS++P P + R IL G+PPNPA RP GC FHPRC A CS+ Sbjct: 241 EVFAKPLHPYTQALVSSVPVAGTPLSDRIILQGEPPNPAARPNGCAFHPRCRFAAPRCSS 300 Query: 301 LRPLLLASGSRGRKVACHLA 320 P LL + GRKVACH A Sbjct: 301 EVPELLDMPA-GRKVACHFA 319 >ref|YP_001370384.1| oligopeptide/dipeptide ABC transporter ATPase subunit [Ochrobactrum anthropi ATCC 49188] gb|ABS14555.1| oligopeptide/dipeptide ABC transporter, ATPase subunit [Ochrobactrum anthropi ATCC 49188] Length = 329 Score = 381 bits (979), Expect = e-104, Method: Compositional matrix adjust. Identities = 194/320 (60%), Positives = 231/320 (72%), Gaps = 1/320 (0%) Query: 1 VKGALLLAEGLAKAYPSQGSLFAPRSRVLAVDGISISLNKGETLGLVGESGCGKSTLGRL 60 + AL+ A L K Y S+ FA V AVDG+SIS+ TLG+VGESG GKST GRL Sbjct: 1 MTAALIEARDLVKTYTSRKGPFAKPVAVRAVDGLSISVAPATTLGIVGESGSGKSTTGRL 60 Query: 61 LLGLEKPDEGCVTFDNEVMPPSQAAAWRRLRARMQLVYQDPLGALDARLSVAEQVGEPLG 120 LLGLE P EG VTF+ +P + A+WR LRARMQLVYQDPL ALD RL + Q+ EPL Sbjct: 61 LLGLEDPSEGEVTFEGSALPRQKTASWRALRARMQLVYQDPLAALDRRLPIGRQIAEPLE 120 Query: 121 IHGIGSPAKRKARVGALLALVGLSEQHGARLPHELSGGQRQRVVLARALATSPDLLVCDE 180 IHGIG+ A++KARV L+ VGL +R PHELSGGQRQRVV+ARA+A P L+VCDE Sbjct: 121 IHGIGTAAEQKARVAELMRAVGLRPDQASRYPHELSGGQRQRVVIARAIACKPQLIVCDE 180 Query: 181 PISALDVSIQAQVINLFMDIQQKFEVAMIFISHDLRAVRQISQRVAVMYLGRIVEEGIAD 240 P+SALDVSIQAQV+NL D+Q++ +AM+FISHDL+ VR IS RVAVMYLGRIVEE +D Sbjct: 181 PVSALDVSIQAQVVNLLRDLQEREGIAMVFISHDLKVVRNISDRVAVMYLGRIVEEASSD 240 Query: 241 DILHTPLHPYTRALVSAIPDVRKPRTRRTILAGDPPNPADRPGGCEFHPRCPVAISACSN 300 +I PLHPYT+ALVS++P P + R IL G+PPNPA RP GC FHPRC A CS+ Sbjct: 241 EIFAKPLHPYTQALVSSVPVAGTPLSDRIILQGEPPNPAARPNGCAFHPRCRFAAPRCSS 300 Query: 301 LRPLLLASGSRGRKVACHLA 320 P LL + GRKVACH A Sbjct: 301 ETPELLDMPA-GRKVACHFA 319 >ref|YP_765516.1| putative ATP-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK03952.1| putative ATP-binding component of ABC transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 331 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 190/324 (58%), Positives = 228/324 (70%), Gaps = 1/324 (0%) Query: 5 LLLAEGLAKAYPSQGSLFAPRSRVLAVDGISISLNKGETLGLVGESGCGKSTLGRLLLGL 64 L+ A L K Y + +F S V AVDG+S+S+ TLG+VGESG GKST+GRLLLGL Sbjct: 6 LIEANDLVKTYTMRRGVFGKPSHVRAVDGVSLSVAPKTTLGIVGESGSGKSTMGRLLLGL 65 Query: 65 EKPDEGCVTFDNEVMPPSQAAAWRRLRARMQLVYQDPLGALDARLSVAEQVGEPLGIHGI 124 E P EG V FD E MP + WR LRARMQLV+QDPL ALD R+S+ Q+GEPL IH + Sbjct: 66 EAPTEGSVRFDGEAMPALRTPRWRSLRARMQLVFQDPLAALDRRISIGAQIGEPLAIHAV 125 Query: 125 GSPAKRKARVGALLALVGLSEQHGARLPHELSGGQRQRVVLARALATSPDLLVCDEPISA 184 GS +R+ RV LL VGL R PHELSGGQRQRVV+ARA+ATSP+LLVCDEP+SA Sbjct: 126 GSEEERRGRVDELLVAVGLRRDQAERYPHELSGGQRQRVVIARAIATSPELLVCDEPVSA 185 Query: 185 LDVSIQAQVINLFMDIQQKFEVAMIFISHDLRAVRQISQRVAVMYLGRIVEEGIADDILH 244 LDVSIQAQVINL D+Q+K +AM FISHDL+ VR I+ RVAVMYLGRIVEE ++DI Sbjct: 186 LDVSIQAQVINLLRDLQEKRGIAMAFISHDLKVVRNIADRVAVMYLGRIVEEAASEDIFR 245 Query: 245 TPLHPYTRALVSAIPDVRKPRTRRTILAGDPPNPADRPGGCEFHPRCPVAISACSNLRPL 304 +PLHPYT+ALVS++P R IL G+PPNPA RP GC FHPRC A+ C P Sbjct: 246 SPLHPYTQALVSSVPVPGTALRDRIILQGEPPNPAARPAGCAFHPRCGHAVERCRVETPE 305 Query: 305 LLASGSRGRKVACHLAAANASQPL 328 + + GRK ACHL + ++ L Sbjct: 306 FVTIEA-GRKAACHLVTSASASTL 328 >ref|YP_001203705.1| putative oligopeptide ABC transporter ATP binding protein [Bradyrhizobium sp. ORS 278] emb|CAL75468.1| Putative oligopeptide ABC transporter (ATP binding protein) [Bradyrhizobium sp. ORS 278] Length = 330 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 190/322 (59%), Positives = 229/322 (71%), Gaps = 1/322 (0%) Query: 5 LLLAEGLAKAYPSQGSLFAPRSRVLAVDGISISLNKGETLGLVGESGCGKSTLGRLLLGL 64 L+ +++ Y + LF + V AVDG+S S+ KGETLG+VGESG GKST GR++LGL Sbjct: 5 LVEVNAISRTYRMRSGLFGRFTSVHAVDGLSFSIQKGETLGIVGESGSGKSTTGRMVLGL 64 Query: 65 EKPDEGCVTFDNEVMPPSQAAAWRRLRARMQLVYQDPLGALDARLSVAEQVGEPLGIHGI 124 E PD G V FD + AAWR RARMQ+++QDPLGALD RL VAEQ+ EPL IH I Sbjct: 65 EPPDHGSVRFDGAPIAAPGTAAWRAQRARMQMIFQDPLGALDRRLPVAEQIREPLDIHDI 124 Query: 125 GSPAKRKARVGALLALVGLSEQHGARLPHELSGGQRQRVVLARALATSPDLLVCDEPISA 184 G+ A+R ARV LL V L++ HG R P LSGGQRQR+VLARALAT PD LVCDEP+SA Sbjct: 125 GTKAERAARVHELLHAVDLNDSHGHRYPGALSGGQRQRIVLARALATRPDFLVCDEPVSA 184 Query: 185 LDVSIQAQVINLFMDIQQKFEVAMIFISHDLRAVRQISQRVAVMYLGRIVEEGIADDILH 244 LDVSIQAQV+NL +D+Q + + M+FISHDLR +RQIS++VAVMYLGRIVE G ADD+ Sbjct: 185 LDVSIQAQVVNLLVDLQARLGLTMLFISHDLRVIRQISRKVAVMYLGRIVEHGDADDLFA 244 Query: 245 TPLHPYTRALVSAIPDVRKPRTRRTILAGDPPNPADRPGGCEFHPRCPVAISACSNLRPL 304 P HPYT+ALVSA P + T R +L GDPPNPA RP GC FHPRC A + C P Sbjct: 245 RPQHPYTQALVSASPAPGRRSTGRIVLTGDPPNPAARPSGCAFHPRCRHATARCKTEVPQ 304 Query: 305 LLASGSRGRKVACHLAAANASQ 326 L+A + R+VACHL SQ Sbjct: 305 LIALDPQ-RQVACHLVTGAPSQ 325 >ref|ZP_06894799.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] gb|EFH13481.1| ABC superfamily ATP binding cassette transporter, ABC protein [Roseomonas cervicalis ATCC 49957] Length = 333 Score = 365 bits (937), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 196/316 (62%), Positives = 224/316 (70%), Gaps = 5/316 (1%) Query: 5 LLLAEGLAKAYPSQGSLFAPRSRVLAVDGISISLNKGETLGLVGESGCGKSTLGRLLLGL 64 LL AEGL + Y + + AVDG+S++L +G TLGLVGESGCGKST GR++LGL Sbjct: 5 LLQAEGLVRRYHQRRGWLGHSVELRAVDGVSLTLERGRTLGLVGESGCGKSTTGRMVLGL 64 Query: 65 EKPDEGCVTFDNEVMPPSQAAAWRRLRARMQLVYQDPLGALDARLSVAEQVGEPLGIHGI 124 E PDEG V F+ MP + WR RARMQ+VYQDPLGALD RL++ QV EPL IH + Sbjct: 65 ETPDEGSVRFEGAPMPAPGSRPWRAQRARMQMVYQDPLGALDRRLTIGAQVAEPLAIHNL 124 Query: 125 GSPAKRKARVGALLALVGLSEQHGARLPHELSGGQRQRVVLARALATSPDLLVCDEPISA 184 PA RV LL VGL R PHELSGGQRQR VLARALAT P LLVCDEPISA Sbjct: 125 --PAG-PDRVAELLRGVGLRPDQADRYPHELSGGQRQRAVLARALATDPALLVCDEPISA 181 Query: 185 LDVSIQAQVINLFMDIQQKFEVAMIFISHDLRAVRQISQRVAVMYLGRIVEEGIADDILH 244 LDVSIQAQV+NL +IQ+ V+++FISHDLRAVRQ+S RVAVMYLGRIVEEG D +LH Sbjct: 182 LDVSIQAQVMNLLSEIQESRGVSLLFISHDLRAVRQMSHRVAVMYLGRIVEEGEPDAVLH 241 Query: 245 TPLHPYTRALVSAIPDVRKPRTRRTILAGDPPNPADRPGGCEFHPRCPVAISACSNLRPL 304 P HPY +ALVSAIPD + R RR +L GDPPNPA RP GC FHPRCPVA C+ P Sbjct: 242 DPAHPYAQALVSAIPDPSR-RGRRIVLQGDPPNPASRPAGCAFHPRCPVAGPRCAAESPA 300 Query: 305 LLASGSRGRKVACHLA 320 L GR VACH+A Sbjct: 301 LKPRAD-GRLVACHVA 315