BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0020.0047.p         (162 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004552172.1| Nucleotidyl transferase [Sinorhizobium melil...   217   6e-55
emb|CAD31357.1| HYPOTHETICAL CONSERVED PROTEIN [Mesorhizobium lo...   208   2e-52
ref|NP_106471.1| hemolysin erythrocyte lysis protein 2 [Mesorhiz...   206   8e-52
ref|NP_085679.1| hypothetical protein mlr9119 [Mesorhizobium lot...   206   8e-52
ref|YP_002990639.1| aminotransferase class I and II [Desulfovibr...   106   1e-21

>ref|YP_004552172.1| Nucleotidyl transferase [Sinorhizobium meliloti AK83]
 gb|AEG58248.1| Nucleotidyl transferase [Sinorhizobium meliloti AK83]
          Length = 263

 Score =  217 bits (552), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 111/152 (73%), Positives = 123/152 (80%), Gaps = 1/152 (0%)

Query: 1   MTAEGPKKAVILAAGVGSRLRPLTDLRPKPLVEVNGTPILHNALGALEAV-VEEVTLVVG 59
           MT   P KAVILAAG GSRLRPLTDLRPKPLVEVNG PILHNAL  LEA+ V++VT+VVG
Sbjct: 1   MTMHFPTKAVILAAGSGSRLRPLTDLRPKPLVEVNGIPILHNALRNLEALGVDDVTIVVG 60

Query: 60  YRKDAIQYACGHRFNTLAIKYVESLAYDHTGSAYSLWLARDSLLSGDSYLLEGDVFFEVD 119
           YRKDAIQY+CG RF  +AI YVES  +D TGSAYSLWLAR +LLSGD+YLLEGDVFFE+D
Sbjct: 61  YRKDAIQYSCGTRFGNVAISYVESNVFDKTGSAYSLWLARHALLSGDTYLLEGDVFFEID 120

Query: 120 VLRYLMKTKAPDNAAVAPFTEMMEGSAVELSD 151
            LR L   +  + AAVAPF   MEGSAV LSD
Sbjct: 121 ALRKLSLYETGNVAAVAPFERSMEGSAVVLSD 152


>emb|CAD31357.1| HYPOTHETICAL CONSERVED PROTEIN [Mesorhizobium loti R7A]
          Length = 272

 Score =  208 bits (529), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/153 (72%), Positives = 124/153 (81%), Gaps = 1/153 (0%)

Query: 1   MTAEGPKKAVILAAGVGSRLRPLTDLRPKPLVEVNGTPILHNALGALEAV-VEEVTLVVG 59
           M    P+KAVILAAG GSRLRPLTDL PKPLVEVNGTPILHNAL  L+AV VEEVT+VVG
Sbjct: 1   MPPAAPRKAVILAAGFGSRLRPLTDLCPKPLVEVNGTPILHNALWNLQAVGVEEVTIVVG 60

Query: 60  YRKDAIQYACGHRFNTLAIKYVESLAYDHTGSAYSLWLARDSLLSGDSYLLEGDVFFEVD 119
           YRKDAI++ACG RF  L I YVES  +D TGSAYSLWLARD+LLSGD YLLEGDVFFE D
Sbjct: 61  YRKDAIRHACGKRFGRLEINYVESSVFDKTGSAYSLWLARDTLLSGDCYLLEGDVFFEED 120

Query: 120 VLRYLMKTKAPDNAAVAPFTEMMEGSAVELSDD 152
            LR+L++ +A + AAVAPF   MEGSA  LS +
Sbjct: 121 ALRHLIRVEAANAAAVAPFDPSMEGSAAVLSGN 153


>ref|NP_106471.1| hemolysin erythrocyte lysis protein 2 [Mesorhizobium loti
           MAFF303099]
 dbj|BAB52257.1| mlr5884 [Mesorhizobium loti MAFF303099]
          Length = 272

 Score =  206 bits (525), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/153 (71%), Positives = 124/153 (81%), Gaps = 1/153 (0%)

Query: 1   MTAEGPKKAVILAAGVGSRLRPLTDLRPKPLVEVNGTPILHNALGALEAV-VEEVTLVVG 59
           M    P+KAVILAAG GSRLRPLTDL PKPLVEVNGTPIL+NAL  L+ V VEEVT+VVG
Sbjct: 1   MPPAAPRKAVILAAGFGSRLRPLTDLCPKPLVEVNGTPILYNALWNLQTVGVEEVTIVVG 60

Query: 60  YRKDAIQYACGHRFNTLAIKYVESLAYDHTGSAYSLWLARDSLLSGDSYLLEGDVFFEVD 119
           YRKDAI++ACG RF  L I YVES  +D TGSAYSLWLARD+LLSGD YLLEGDVFFE D
Sbjct: 61  YRKDAIRHACGERFGRLEINYVESSVFDKTGSAYSLWLARDTLLSGDCYLLEGDVFFEED 120

Query: 120 VLRYLMKTKAPDNAAVAPFTEMMEGSAVELSDD 152
            LR+L++ +A + AAVAPF   MEGSAV LS +
Sbjct: 121 ALRHLIRVEAANAAAVAPFDPSMEGSAVVLSSN 153


>ref|NP_085679.1| hypothetical protein mlr9119 [Mesorhizobium loti MAFF303099]
 dbj|BAB54520.1| mlr9119 [Mesorhizobium loti MAFF303099]
          Length = 270

 Score =  206 bits (525), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 99/154 (64%), Positives = 123/154 (79%), Gaps = 1/154 (0%)

Query: 1   MTAEGPKKAVILAAGVGSRLRPLTDLRPKPLVEVNGTPILHNALGALEAV-VEEVTLVVG 59
           + ++ P+ A+ILAAG+GSRLRP T+ RPKPLVE++G PI+HNAL  L +V V  VT+VVG
Sbjct: 2   LNSDLPQSAIILAAGMGSRLRPFTNTRPKPLVEIHGIPIIHNALANLSSVGVGSVTIVVG 61

Query: 60  YRKDAIQYACGHRFNTLAIKYVESLAYDHTGSAYSLWLARDSLLSGDSYLLEGDVFFEVD 119
           YRKDAI+YACG +F  + I YVES  +D TGSAYSLWLARD+LLSGD YLLEGDVFF+++
Sbjct: 62  YRKDAIEYACGEQFAGIDITYVESTVFDRTGSAYSLWLARDALLSGDVYLLEGDVFFDLE 121

Query: 120 VLRYLMKTKAPDNAAVAPFTEMMEGSAVELSDDE 153
            +R L   + PD AAVAPFTE MEGSA  L+DD+
Sbjct: 122 AIRSLTMARRPDVAAVAPFTEAMEGSAALLNDDD 155


>ref|YP_002990639.1| aminotransferase class I and II [Desulfovibrio salexigens DSM 2638]
 gb|ACS79100.1| aminotransferase class I and II [Desulfovibrio salexigens DSM 2638]
          Length = 609

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 60/146 (41%), Positives = 87/146 (59%), Gaps = 2/146 (1%)

Query: 8   KAVILAAGVGSRLRPLTDLRPKPLVEVNGTPILHNALGAL-EAVVEEVTLVVGYRKDAIQ 66
           + +ILAAG G RL P+TD  PKPLVEVNG P++ NAL  L +  VE   +V GY+ + + 
Sbjct: 2   QVIILAAGRGQRLSPITDDVPKPLVEVNGCPLIINALDILSKHPVERFIIVEGYKSEQLH 61

Query: 67  YACGHRFNTLAIKYVESLAYDHTGSAYSLWLARDSLLSGDSYLLEGDVFFEVDVLRYLMK 126
              G  +N + I YV +  +D T + +SLWL R+ L   ++ LLE D+FFE  ++  L++
Sbjct: 62  ERLGDSYNCIEIVYVRNEDWDKTNNIHSLWLTRE-LWDRNTILLECDIFFEPGLIEELLE 120

Query: 127 TKAPDNAAVAPFTEMMEGSAVELSDD 152
               +   V  F   M+G+ VELS D
Sbjct: 121 EPFANAVMVDHFQPHMDGTVVELSAD 146