BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0037.p (746 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_085825.1| hypothetical protein mlr9290 [Mesorhizobium lot... 926 0.0 ref|YP_563269.1| TPR repeat-containing protein [Shewanella denit... 127 1e-26 ref|YP_003114478.1| hypothetical protein Caci_3735 [Catenulispor... 116 2e-23 ref|YP_002770210.1| hypothetical protein BBR47_07290 [Brevibacil... 115 3e-23 ref|ZP_06970920.1| TPR repeat-containing protein [Ktedonobacter ... 115 3e-23 >ref|NP_085825.1| hypothetical protein mlr9290 [Mesorhizobium loti MAFF303099] dbj|BAB54666.1| mlr9290 [Mesorhizobium loti MAFF303099] Length = 728 Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/727 (63%), Positives = 553/727 (76%), Gaps = 1/727 (0%) Query: 1 MVDLIQQRIAPAILSSVEINPITILKTEPGMAPVPTIKSALASSSSDLSVVDGDWRIGGY 60 M D +Q I +V + IT+LK GMAP TI +ALA S++ DGDW+ GGY Sbjct: 1 MADFVQSHALALISEAVGASTITVLKAGKGMAPRATIATALADCGSNVEFADGDWQRGGY 60 Query: 61 LAGLQELIDAELRWADENRPKLVETAQQSLKRLFPLLVSDAFTVPKDLTNTSSKEERTRF 120 LAG Q L+DA L W + P L+E QQSLKRLFPLL S AFTVPKDLTNTSSKEERTRF Sbjct: 61 LAGFQNLVDAALEWTTKECPHLIEKHQQSLKRLFPLLSSAAFTVPKDLTNTSSKEERTRF 120 Query: 121 YHHEYQNKLLVGLAEFLIRCAQERNERHIIVIDRAAALSAPAKNLIKLLVRLDHDARLFR 180 YHHEYQNKLLVGLAE+L+ A R ++VIDRA+ +S A NL+K+L RLD + R FR Sbjct: 121 YHHEYQNKLLVGLAEYLLEYASRSGLRFVLVIDRASEMSPTAVNLVKVLRRLDSE-RHFR 179 Query: 181 FVLIDYEQRLYFQDASEVHFGRYSLQELGPILDREVAAEKQRQIHEASGGNPLIAEALST 240 FVL+D+ ++ + A EV+FG YS+ EL + ++A +K+R I EA+ GNPL+ AL T Sbjct: 180 FVLVDHSNSVFIEGACEVNFGCYSIDELVGLFKPDMAPQKRRLIFEAARGNPLLLRALIT 239 Query: 241 CVAAGLPVIGYLAPVAIVDLYLASLNTGERHSLLKSYIESDCTTPDLIAQRNYAIFEQTT 300 C AG+PV+GYL+ A +DL+LASL+ ER +L+SY+E+DC DLIAQRNY F++ Sbjct: 240 CNQAGMPVVGYLSSNAAIDLHLASLSPEERSEMLRSYVEADCNPTDLIAQRNYETFDRGY 299 Query: 301 ADHLHEQLHRACLDRYLAGEAPLVMLHALSIRDKYKRLELLAEPSQILQSIGLYDLWFGY 360 AD LH ++HRA +++YLAG++PLV HALS+R+K+KRLEL+AEPS+IL+SIGLYD WF Y Sbjct: 300 ADGLHAEMHRAAIEKYLAGKSPLVTFHALSVRNKFKRLELIAEPSEILKSIGLYDTWFSY 359 Query: 361 FGEIFADPALRTFGPGDAPANAAFINAAFVLYSLGCGRVSVPYLDEFYKAFPKSRYTPTV 420 FGE+FADP LR +G G+ NA FINAAFVLYSLGCG VSVPYLD FY FP SRYTPTV Sbjct: 360 FGEMFADPELRVYGTGNDAINAVFINAAFVLYSLGCGCVSVPYLDLFYSKFPSSRYTPTV 419 Query: 421 LYAQSMTYGRYQQPVNLTVAEEYALRNLETIERDFKDHDKYDYIKVFAENAYAYIKAKQE 480 LYAQSMTY RYQQPVNL +AE+YALRNL+TIERDFK H+KY YIKVFAENAYAYIKA+Q Sbjct: 420 LYAQSMTYARYQQPVNLPLAEQYALRNLDTIERDFKYHEKYHYIKVFAENAYAYIKARQG 479 Query: 481 KYDEALTLCAEGHGKMLKAYGEERFKLHQSILIYNTSQVYELVDDLPRAEKQLREAIAYD 540 ++DEAL LC EG M + YG+ RFKLHQSIL+YN SQVYELV++L AEK L + IA D Sbjct: 480 QFDEALQLCTEGKATMSETYGDNRFKLHQSILMYNISQVYELVNELSLAEKNLGDVIAVD 539 Query: 541 PYYGEYHNDLGNLLSKVPGREAEALQAYARAIELCPPYYEAHLNRAALRNRMGYAAGALS 600 PYYGEY NDLGNLL KVPGRE A AYARAIELCPPYYEAHLNRA LR R+G GALS Sbjct: 540 PYYGEYQNDLGNLLGKVPGREVHASNAYARAIELCPPYYEAHLNRAGLRKRLGDTQGALS 599 Query: 601 DLDRTLVIKPNEWRAHFQKGNILMRQDRPEAALESYLAAADIDPKNPDLQSNLGLAYSEL 660 DLDR L IKP EWRA +KGNIL+ P AA+E+YLAAA+ P + DLQSNLGLAYSEL Sbjct: 600 DLDRALSIKPEEWRALLEKGNILLSAGNPSAAIEAYLAAAEFVPSHADLQSNLGLAYSEL 659 Query: 661 GKASESIAHYLRALELNPRHALTHNNLAIEYFNEGRPDISLNHATVAVEIGGDPDYLLTR 720 K +SIAHY +AL+++PRHA HNNLAIE FN +PD +L HA AV+ GDPDY TR Sbjct: 660 EKPEQSIAHYQKALDIDPRHAPAHNNLAIELFNAKQPDAALEHANQAVDFAGDPDYEATR 719 Query: 721 EHIQASL 727 HI+ +L Sbjct: 720 NHIRMAL 726 >ref|YP_563269.1| TPR repeat-containing protein [Shewanella denitrificans OS217] gb|ABE55546.1| TPR repeat [Shewanella denitrificans OS217] Length = 622 Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 79/270 (29%), Positives = 142/270 (52%), Gaps = 5/270 (1%) Query: 422 YAQSMTYGRYQQPVNLTVAEEYAL---RNLETIERDFKDHDKYDYIKVFAENAYAYIKAK 478 Y SM Y RY + +L A+++ + + + T + D + +D++ VF +N A+++ + Sbjct: 330 YLLSMVYLRYLKQQDLEKAQQHIMLSKQEIATAQGKVSDLE-HDFLSVFIDNGLAFLRVR 388 Query: 479 QEKYDEALTLCAEGHGKMLKAYGEERFKLHQSILIYNTSQVYELVDDLPRAEKQLREAIA 538 Q + +EAL LC+EG + + G+E KLH+S+L+YN++QVY L+ + A K EA+ Sbjct: 389 QGRSEEALQLCSEGFNFLTERLGDEAHKLHRSVLLYNSAQVYTLLGETEAALKFYNEAVE 448 Query: 539 YDPYYGEYHNDLGNLLSKVPGREAEALQAYARAIELCPPYYEAHLNRAALRNRMGYAAGA 598 DPYY EY+N++GNLL ++ GR +A+ Y AI+ PY E + N+ + A Sbjct: 449 MDPYYSEYYNEIGNLLQRL-GRYQQAIGMYESAIKYSAPYSEVYSNKGMCHVFLEQWPAA 507 Query: 599 LSDLDRTLVIKPNEWRAHFQKGNILMRQDRPEAALESYLAAADIDPKNPDLQSNLGLAYS 658 L +L + P++ + +G++ D + A Y A + + + N + + Sbjct: 508 LECFAHSLELSPHQQDVYLVRGDVFSGFDEQDKAFADYSRAISLTGDSATARVNRAVIHY 567 Query: 659 ELGKASESIAHYLRALELNPRHALTHNNLA 688 E + ++ RA+EL P + + N A Sbjct: 568 EREQYDAALRDMNRAIELEPNNPSHYENRA 597 >ref|YP_003114478.1| hypothetical protein Caci_3735 [Catenulispora acidiphila DSM 44928] gb|ACU72637.1| TPR repeat-containing protein [Catenulispora acidiphila DSM 44928] Length = 707 Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 163/660 (24%), Positives = 253/660 (38%), Gaps = 76/660 (11%) Query: 50 VVDGDWRIGGYLAGLQELIDAELRWADENRPKLVETAQQSLKRLFPLLVSDAFTVP---K 106 V+D R+ G L+ A + A +P LV A+Q L+ + + VP + Sbjct: 33 VLDAHRRLRGPYTAAGTLLRAIVPDALREQPDLV--ARQDLE-ILAMAQELRGIVPATRE 89 Query: 107 DLTNTSSKEERTRFYHHEYQNKLLVGLAEFLIRCAQERNERHIIVIDRAAALSAPAKNLI 166 LT+ ++ EERTR+Y ++ G AEFL D AA L P Sbjct: 90 TLTSLAAPEERTRYYSKLRTTRISHGTAEFLR--------------DYAATLGRPDSGPQ 135 Query: 167 KLLVRLDHDARLFRFVLIDYEQRLYFQDASEVHFGRYSLQELGPILDREVAAEKQRQIHE 226 L+V + D ++ F L+ + P + R V ++ Sbjct: 136 TLVV-----------------ENAEHADPTDAEFLAILLRRIDPAVLRVVVCSGDGELPP 178 Query: 227 ASGGNPLIAEALSTCVAAGLPVIGYLAPVAIVDLYLASLNTGERHSLLKSYIESDCTTPD 286 + L A VAAG P A +DL + H L +Y+ DCT+ + Sbjct: 179 GPLHDALEQYATRVDVAAGAPT------AAGLDL------AADPHELAAAYVRGDCTSDE 226 Query: 287 LIAQRNYAIFEQTTADHLHEQLHRACLDRYLAGEAPLVMLHALSIRDKYKRLELLAEPSQ 346 + Y + LH+ R GE P + A+ ++ A Sbjct: 227 PLLLAAYQDMDPHERRRLHDDRAAELESR---GE-PSLGYGAIPFHREHGADPEGAGVQA 282 Query: 347 ILQSIGLYDLWFGYFGEIFADPALRTFGPGDAPANAAFINAAFVLYSLGCGRVSVPY--- 403 + ++I L Y I LR + + F + R+S Y Sbjct: 283 LQKAIDDLSLLGYYHATIELAIRLRQYVGWEGGRRRYFATTS---------RLSTAYAVL 333 Query: 404 -----LDEFYKAFPKSRYTPTV----LYAQSMTYGRYQQPVNLTVAEEYALRNLETIERD 454 +E Y ++ P V YA +M Y R+ + + AL N Sbjct: 334 EEPDKCEELYDEARRNSTDPEVHMGAAYATAMLYTRHYEKSKIDHDRGRALVNQAIAIAS 393 Query: 455 FKDHDKYDYI-KVFAENAYAYIKAKQEKYDEALTLCAEGHGKMLKAYGEERFKLHQSILI 513 KY I VF N A ++ Q +EAL L ++ ++ + ++LH+S+L Sbjct: 394 LLPDPKYRAIHSVFMNNGLALVEMHQGSPEEALRLVSDCIAQLDREMEPGEYRLHRSVLH 453 Query: 514 YNTSQVYELVDDLPRAEKQLREAIAYDPYYGEYHNDLGNLLSKVPGREAEALQAYARAIE 573 +N + VY + A + I DP Y EY+ D GNL ++ RE EA Y AI Sbjct: 454 HNRANVYRALGRFEEAAAEFSTVIGLDPNYPEYYFDRGNLY-RLMDREDEAYADYETAIR 512 Query: 574 LCPPYYEAHLNRAALRNRMGYAAGALSDLDRTLVIKPNEWRAHFQKGNILMRQDRPEAAL 633 L PP++EA NR +R G GAL+D D L I P A + +L+ AA Sbjct: 513 LSPPFHEAFYNRGDIRAARGDVDGALADFDYVLDIDPEFVDARVNRAALLLELGEDAAAE 572 Query: 634 ESYLAAADIDPKNPDLQSNLGLAYSELGKASESIAHYLRALELNPRHALTHNNLAIEYFN 693 + A +DP N L + LG + G +S+A + RAL+ +P H A+ F+ Sbjct: 573 QDARAGLAVDPDNAHLHTALGQINALRGDTEQSLAAFSRALDTDPEHVPALAGRAVVRFD 632 Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust. Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Query: 529 AEKQLREAIAYDPYYGEYHNDLGNLLSKVPGREAEALQAYARAIELCPPYYEAHLNRAAL 588 AE+ R +A DP H LG + + + G ++L A++RA++ P + A RA + Sbjct: 571 AEQDARAGLAVDPDNAHLHTALGQI-NALRGDTEQSLAAFSRALDTDPEHVPALAGRAVV 629 Query: 589 RNRMGYAAGALSDLDRTLVIKPNEWRAHFQKGNIL 623 R A +DLD + ++P + F + + Sbjct: 630 RFDAADHTAARADLDEAIRLQPEDPALLFNRAMVF 664 >ref|YP_002770210.1| hypothetical protein BBR47_07290 [Brevibacillus brevis NBRC 100599] dbj|BAH41706.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 731 Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 120/485 (24%), Positives = 206/485 (42%), Gaps = 29/485 (5%) Query: 251 YLAPVAIV-----DLYLASLNTGERHSLLKSYIESDCTTPDLIAQRNYAIFEQTTAD--- 302 Y P I+ D + +L+ +R L K YI SDCT+ ++ +E T + Sbjct: 183 YTEPTTILSDIEQDRGIVNLSDEQRLELTKRYIFSDCTSD---CEQELLAYEATPIEIRQ 239 Query: 303 HLHEQLHRACLDRYLAGEAPLVMLHALSIRDKYKRLELLAEPSQILQSIGLYDLWFGYFG 362 LHE+ A L E LH +I +R S+ L Y + G++ Sbjct: 240 SLHEERAEA-----LRKEEQWS-LHLGAIPFHLERGTSEKSASEALFKAVSYSINMGFYD 293 Query: 363 EIFADPALRTFGPGDAPANAAFINAAFVLYSLGCGRVSVPYLD-------EFYKAFPKSR 415 D +LR G ++ F N+ + + ++ D E Y R Sbjct: 294 ATI-DMSLR--GRKLMNWSSEFDNSRYFTMKMATSLAALGETDDIPTLLGEVYANTDDFR 350 Query: 416 YTPTVLYAQSMTYGRYQQPVNLTVAEEYALRNLETIERDFKDHDKYDYIKVFAENAYAYI 475 + Y SM Y R+ + A E+ + ++ E +D + + +VF +N A + Sbjct: 351 VHMQISYGFSMYYTRHHREREHEKAREWIQKAIDLAEW-IEDEKERAFQQVFNQNGLALV 409 Query: 476 KAKQEKYDEALTLCAEGHGKMLKAYGEERFKLHQSILIYNTSQVYELVDDLPRAEKQLRE 535 + + +EAL L EG ++ + + LH+S+L++N +Y + A + + Sbjct: 410 ELHMDNPEEALRLVTEGWQRLNQDLAPDEHMLHRSVLLHNKGLIYVALKRFEEAAETFSQ 469 Query: 536 AIAYDPYYGEYHNDLGNLLSKVPGREAEALQAYARAIELCPPYYEAHLNRAALRNRMGYA 595 I D Y EY+ D GNL S++ GR EA++ Y +AI+L PP+ E + NRA NR+G Sbjct: 470 VIQIDSNYPEYYFDRGNLYSRM-GRLDEAIEDYNQAIKLSPPFPEVYFNRATAFNRLGDV 528 Query: 596 AGALSDLDRTLVIKPNEWRAHFQKGNILMRQDRPEAALESYLAAADIDPKNPDLQSNLGL 655 A++D D L I P + +L + ++ E A + +I+P + L LGL Sbjct: 529 EKAMADYDYLLDIDPENLDGLLNRATLLYQVEKFEMARKDAEFGLEIEPDHARLLCTLGL 588 Query: 656 AYSELGKASESIAHYLRALELNPRHALTHNNLAIEYFNEGRPDISLNHATVAVEIGGDPD 715 G +++ + AL + N A+ Y+ G D ++ T A+ + + Sbjct: 589 IEMSDGNNDQALKTFTAALNKDKEMMAAWTNRAVLYYEMGEYDRAIADLTEAMALEKNAT 648 Query: 716 YLLTR 720 L R Sbjct: 649 VLYNR 653 >ref|ZP_06970920.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] gb|EFH83640.1| TPR repeat-containing protein [Ktedonobacter racemifer DSM 44963] Length = 770 Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 83/261 (31%), Positives = 123/261 (47%), Gaps = 7/261 (2%) Query: 463 YIKVFAENAYAYIKAKQEKYDEALTLCAEGHGKMLKAYGEERFKLHQSILIYNTSQVYEL 522 + VF +N A I+ + + EAL L EG ++ + LH+S+L+YN QVY Sbjct: 454 FHSVFNQNGLALIETHLKNFQEALRLVTEGLKRLDEELEPGEHMLHRSVLLYNRGQVYAG 513 Query: 523 VDDLPRAEKQLREAIAYDPYYGEYHNDLGNLLSKVPGREAEALQAYARAIELCPPYYEAH 582 + L A I DPYY EY+ + GNL ++ GR EAL Y R++ PPY EAH Sbjct: 514 IGALEEALADYTAVITQDPYYSEYYLERGNLYRRL-GRNEEALADYERSVFYSPPYAEAH 572 Query: 583 LNRAALRNRMGYAAGALSDLDRTLVIKPNEWRAHFQKGNILMRQDRPEAALESYLAAADI 642 NRA + + G+ AL+D L I P A + +I Q A+L+ Sbjct: 573 FNRANVHSLFGHDEEALADYSYVLEIDPTYLDALINRASIFYEQGNYTASLQDVERGLQQ 632 Query: 643 DPKNPDLQSNLGL---AYSELGKASESIAHYLRALELNPRHALTHNNLAIEYFNEGRPDI 699 DP+N L LGL A + KA ++ + AL+ +P N AI F E R + Sbjct: 633 DPENAQLHCTLGLLLMAQEDTEKADQAFS---AALQQDPLLVAAWTNRAILAFEENRIEA 689 Query: 700 SLNHATVAVEIGGDPDYLLTR 720 ++ + A+ + +P L R Sbjct: 690 AIKDLSQALALEENPTVLYNR 710