BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0030.p (154 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01045518.1| hypothetical protein NB311A_20151 [Nitrobacte... 164 3e-39 ref|YP_001984298.1| hypothetical protein RHECIAT_PB0000023 [Rhiz... 149 1e-34 ref|YP_782169.1| hypothetical protein RPE_3255 [Rhodopseudomonas... 147 7e-34 ref|ZP_03726510.1| conserved hypothetical protein [Opitutaceae b... 138 3e-31 ref|YP_002973072.1| hypothetical protein Rleg_4887 [Rhizobium le... 132 1e-29 >ref|ZP_01045518.1| hypothetical protein NB311A_20151 [Nitrobacter sp. Nb-311A] gb|EAQ36286.1| hypothetical protein NB311A_20151 [Nitrobacter sp. Nb-311A] Length = 284 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 77/154 (50%), Positives = 110/154 (71%), Gaps = 2/154 (1%) Query: 3 KIRAGRSILSFFYRKEIGALSGAIVDHKTDTGRFKLSSPELTGLDLLRYMHVTGTIDSIA 62 KIRAGRS ++F +RKE+ ++ I++ KTDTG K+SSPELT LDL+RY+HV G +D++A Sbjct: 131 KIRAGRSWITFHFRKEMKSVYQGIIERKTDTGTMKVSSPELTALDLVRYIHVAGGVDAVA 190 Query: 63 TVLSDLGAKMKAHELQKLAPAFERSVIQRLGYLLDYVKHSQAAESLHAYLQNEKLLPWVE 122 TVL+DLGAK+ L +A F+R+ +QRLGYLLD + H++ A+++H +L K +PWV Sbjct: 191 TVLNDLGAKIDGESLATIAGNFDRACVQRLGYLLDRLGHAERADAMHKHLSATKTVPWVA 250 Query: 123 LDPSKRS--SKTRKPPERDTRWNVLVHRRPELDQ 154 L+P + S S + P ER RW V V R PE+D+ Sbjct: 251 LEPQRHSNDSPSIPPAERSERWRVTVQREPEIDE 284 >ref|YP_001984298.1| hypothetical protein RHECIAT_PB0000023 [Rhizobium etli CIAT 652] gb|ACE93748.1| hypothetical protein RHECIAT_PB0000023 [Rhizobium etli CIAT 652] Length = 275 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 76/156 (48%), Positives = 102/156 (65%), Gaps = 2/156 (1%) Query: 1 MPKIRAGRSILSFFYRKEIGALSGAIVDHKTDTGRFKLSSPELTGLDLLRYMHVTGTIDS 60 +P I AGR+ + F YRK++GA+S I D KT +G KLSSPELT DL+RY H +D+ Sbjct: 120 LPDIEAGRTRIVFSYRKDMGAVSAGIEDRKTPSGYMKLSSPELTAFDLVRYPHSGAGLDN 179 Query: 61 IATVLSDLGAKMKAHELQKLAPAFERSVIQRLGYLLDYVKHSQAAESLHAYLQNEKLLPW 120 IATVLS+L +++ +L L+ A E++V QRLG+LL + HSQ AE++ A L LPW Sbjct: 180 IATVLSELAGQLQPKKLASLSRALEKAVAQRLGHLLGRLGHSQIAEAMFAALSPRGPLPW 239 Query: 121 VELDPSKRSSKTRKPP--ERDTRWNVLVHRRPELDQ 154 VELDP + PP ERD W V+V R PE+D+ Sbjct: 240 VELDPKQAGDPDLSPPPSERDEHWRVIVRRPPEIDE 275 >ref|YP_782169.1| hypothetical protein RPE_3255 [Rhodopseudomonas palustris BisA53] gb|ABJ07189.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 275 Score = 147 bits (370), Expect = 7e-34, Method: Compositional matrix adjust. Identities = 74/156 (47%), Positives = 103/156 (66%), Gaps = 2/156 (1%) Query: 1 MPKIRAGRSILSFFYRKEIGALSGAIVDHKTDTGRFKLSSPELTGLDLLRYMHVTGTIDS 60 +P I AGR+ ++F YRK++ A+S I D KT +G KLSSPELT LDL+RY +D+ Sbjct: 120 LPVIEAGRTRIAFSYRKDMAAVSAGIEDRKTPSGYMKLSSPELTALDLVRYPQSGAGLDN 179 Query: 61 IATVLSDLGAKMKAHELQKLAPAFERSVIQRLGYLLDYVKHSQAAESLHAYLQNEKLLPW 120 IATVLS+L +++ +L L+ AFE++V+QRLG+LL + H Q AE++ + L L W Sbjct: 180 IATVLSELAERLQPKKLASLSGAFEKAVVQRLGHLLGRLGHPQIAETMFSALSARGPLQW 239 Query: 121 VELDPSKRSSKTRKPP--ERDTRWNVLVHRRPELDQ 154 VELDP + PP ERD RW V+V R PE+D+ Sbjct: 240 VELDPKQAGDPDLSPPPSERDARWRVIVRRPPEIDE 275 >ref|ZP_03726510.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gb|EEG19465.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 278 Score = 138 bits (347), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 73/158 (46%), Positives = 102/158 (64%), Gaps = 4/158 (2%) Query: 1 MPKIRAGRSILSFFYRKEIGALSGAIVDHKTDTGRFKLSSPELTGLDLLRYMHVTGTIDS 60 +P +RAGRS +SF +R++I ++ I + KT+ G ++SSPELT DL+RY H TG +D Sbjct: 120 LPGLRAGRSTVSFHFRRDIEDVAVGIGECKTEAGTMRVSSPELTAFDLVRYSHATGGLDH 179 Query: 61 IATVLSDLGAKMKAHELQKLAPAFERSVIQRLGYLLDYVKHSQAAESLHAYLQNEKLLPW 120 + TVL +LGAK+ +L L P FE SV QRLGYLL H+ AAE + A L N+ Sbjct: 180 VLTVLIELGAKIDGGKLAILCPKFETSVRQRLGYLLARGGHAHAAEVIRASLANDPGFRR 239 Query: 121 VELDPSKRS----SKTRKPPERDTRWNVLVHRRPELDQ 154 VELDPSK++ + +P +RD+RW ++V PE DQ Sbjct: 240 VELDPSKKALADPDLSFEPVKRDSRWRLIVRHAPEADQ 277 >ref|YP_002973072.1| hypothetical protein Rleg_4887 [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS59111.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 275 Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 67/156 (42%), Positives = 96/156 (61%), Gaps = 2/156 (1%) Query: 1 MPKIRAGRSILSFFYRKEIGALSGAIVDHKTDTGRFKLSSPELTGLDLLRYMHVTGTIDS 60 +PKI+AGR+ F+YRK++ ++ +VD KT+TG ++SSP LT LD+LRY H G +D+ Sbjct: 120 LPKIKAGRNRFVFYYRKDMETVAAGVVDKKTETGSMRVSSPALTALDILRYSHGAGGLDN 179 Query: 61 IATVLSDLGAKMKAHELQKLAPAFERSVIQRLGYLLDYVKHSQAAESLHAYLQNEKLLPW 120 I TVL D+ ++ L L+ ER V+QRLGYLLD + H S+ L++ LPW Sbjct: 180 IFTVLRDIAPQIDFESLTNLSRVTERPVVQRLGYLLDRLGHGPRLASMRTALEDRGNLPW 239 Query: 121 VELDPSKRSSK--TRKPPERDTRWNVLVHRRPELDQ 154 ELD + + + ERD RW V+V R PE D+ Sbjct: 240 TELDRKEAGDPDFSTEVLERDPRWRVIVRRYPEADE 275