BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0020.0025.p (279 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_06888409.1| conserved hypothetical protein [Methylosinus ... 324 9e-87 ref|YP_001373187.1| hypothetical protein Oant_4770 [Ochrobactrum... 309 3e-82 ref|YP_666212.1| hypothetical protein Meso_4610 [Mesorhizobium s... 305 6e-81 ref|YP_004553084.1| hypothetical protein Sphch_0885 [Sphingobium... 301 9e-80 ref|ZP_05121861.1| conserved hypothetical protein [Rhodobacterac... 298 8e-79 >ref|ZP_06888409.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] gb|EFH03046.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] Length = 285 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 165/279 (59%), Positives = 198/279 (70%), Gaps = 5/279 (1%) Query: 1 MTTQLPGKLNQLRRDLPEGLLVDAAWLSKHGYATSLVSKYVAAGYLERPAGRVYRKPRGA 60 M+ Q GKLNQL R LPEGLLVD+AWL+ GY+TSL +KYVA+G+LE+PA RVYR+PRG Sbjct: 1 MSEQNAGKLNQLERLLPEGLLVDSAWLTARGYSTSLRAKYVASGWLEQPARRVYRRPRGQ 60 Query: 61 LSWEQAVISLQTLLYRTPLAVGGRTALALQGYEHYLPRATQQVHLYGPSAPPGWLSKLPL 120 L W+QAVISLQTLL L VGGRTAL LQGY HYL + + ++H++G + PPGWL+ LPL Sbjct: 61 LGWQQAVISLQTLLGHR-LVVGGRTALELQGYAHYLTQNSPEIHIHGSTKPPGWLTLLPL 119 Query: 121 SIRFVFHNSAALFSPE---AGLPPKGDLDRANAAAEKEAAEKGFVIQSWGQWRWPLVVSS 177 RFV+ NS LF + PP DRA + E G SWGQW WPL S+ Sbjct: 120 KERFVYRNSVPLFGSDLDAVAFPPLVR-DRARTQDDPSFQEAGLRALSWGQWDWPLTASA 178 Query: 178 PERALLEVLDELPDHESFETADKLVESLSTLSPRRMQTLLQACQSVKAKRLLFFFADRHS 237 PERA+LE+L+ELPDHESF D L+E LS L+PRR+ T+L C++VK KRL FFFADRH Sbjct: 179 PERAILELLNELPDHESFHQVDMLMEGLSNLAPRRLHTMLVRCRNVKVKRLFFFFADRHR 238 Query: 238 HAWKNKINKDHVDLGSGKRMLVKGGVLDRTYQITVPKGL 276 HAW I + +DLGSGKRMLVK G D YQITVPK L Sbjct: 239 HAWLKHIERAAIDLGSGKRMLVKDGRFDPAYQITVPKDL 277 >ref|YP_001373187.1| hypothetical protein Oant_4770 [Ochrobactrum anthropi ATCC 49188] gb|ABS17358.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 261 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 151/279 (54%), Positives = 186/279 (66%), Gaps = 19/279 (6%) Query: 1 MTTQLPGKLNQLRRDLPEGLLVDAAWLSKHGYATSLVSKYVAAGYLERPAGRVYRKPRGA 60 M Q LN+L RDLPEGL+VDAAWL + G A++L + YV G+LE+P +Y+KPRG Sbjct: 1 MAEQSTSLLNRLERDLPEGLVVDAAWLQQRGIASNLRAYYVKNGWLEQPVRSIYKKPRGT 60 Query: 61 LSWEQAVISLQTLLYRTPLAVGGRTALALQGYEHYLPRATQQVHLYGPSAPPGWLSKLPL 120 LSW+Q +ISLQTLL R PL VGGRTAL LQG+ HYL T+ VHLYGP PP WL+KL L Sbjct: 61 LSWQQVIISLQTLLSRAPLYVGGRTALELQGFAHYLAHETRIVHLYGPEKPPAWLNKLQL 120 Query: 121 SIRFVFHNSAALFSPEAGLPPKGDLDRANAAAEKEAAEKGFVIQSWGQWRWPLVVSSPER 180 RF++HNSA LF E +G +WGQW WP+ +S PER Sbjct: 121 PQRFIYHNSATLF-------------------RNEPITQGLGTLAWGQWDWPMTLSQPER 161 Query: 181 ALLEVLDELPDHESFETADKLVESLSTLSPRRMQTLLQACQSVKAKRLLFFFADRHSHAW 240 A LE+LDELP +ESF AD +++S + SPRR+Q LL C SVK KRL F+FADRH HAW Sbjct: 162 AYLEMLDELPRNESFHQADMIMQSAANFSPRRLQRLLLDCDSVKVKRLFFYFADRHGHAW 221 Query: 241 KNKINKDHVDLGSGKRMLVKGGVLDRTYQITVPKGLDAV 279 +++K +DLG GKRMLV GG LD Y ITVP+ DA+ Sbjct: 222 VKRLDKTAIDLGKGKRMLVPGGKLDPVYHITVPRDFDAI 260 >ref|YP_666212.1| hypothetical protein Meso_4610 [Mesorhizobium sp. BNC1] gb|ABG65629.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length = 283 Score = 305 bits (781), Expect = 6e-81, Method: Compositional matrix adjust. Identities = 155/280 (55%), Positives = 197/280 (70%), Gaps = 5/280 (1%) Query: 1 MTTQLPGKLNQLRRDLPEGLLVDAAWLSKHGYATSLVSKYVAAGYLERPAGRVYRKPRGA 60 M+ + GKLNQL+R LPEGL+VD+ WL + GY+ L+ KYV +G+LERP VYRKP G Sbjct: 1 MSEESTGKLNQLQRLLPEGLVVDSGWLKERGYSPQLLRKYVLSGWLERPFHGVYRKPGGK 60 Query: 61 LSWEQAVISLQTLLYRTPLAVGGRTALALQGYEHYLPRATQQVHLYGPSAPPGWLSKLPL 120 L W+ VISLQ+LL + PL VGGRTAL+L G+ HYL + ++VHLYGP PP WL+KL L Sbjct: 61 LLWQHVVISLQSLLLK-PLVVGGRTALSLHGFSHYLRQEEREVHLYGPENPPSWLNKLTL 119 Query: 121 SIRFVFHNSAALFSPEA---GLPPKGDLDRANAAAEKEAAEKG-FVIQSWGQWRWPLVVS 176 IRF+ HNSA LF+ E GL + N+A + G F + WG W WPL +S Sbjct: 120 PIRFLHHNSATLFANEPIHFGLTSLEWNLKDNSAHRADNLHGGSFRVMPWGPWEWPLTLS 179 Query: 177 SPERALLEVLDELPDHESFETADKLVESLSTLSPRRMQTLLQACQSVKAKRLLFFFADRH 236 +PERA+LE+LD LP HESF+ DKL E L+TLSPRR+Q LL C+S+K KRL FFFADRH Sbjct: 180 TPERAILEMLDGLPAHESFDATDKLFEGLNTLSPRRLQKLLSDCKSIKVKRLFFFFADRH 239 Query: 237 SHAWKNKINKDHVDLGSGKRMLVKGGVLDRTYQITVPKGL 276 +H W+ ++K+ LG+GKR+LV GG LD TY ITVP+ L Sbjct: 240 NHPWRKHLHKESFHLGTGKRLLVHGGRLDPTYLITVPEEL 279 >ref|YP_004553084.1| hypothetical protein Sphch_0885 [Sphingobium chlorophenolicum L-1] gb|AEG48578.1| hypothetical protein Sphch_0885 [Sphingobium chlorophenolicum L-1] Length = 264 Score = 301 bits (770), Expect = 9e-80, Method: Compositional matrix adjust. Identities = 157/276 (56%), Positives = 193/276 (69%), Gaps = 18/276 (6%) Query: 1 MTTQLPGKLNQLRRDLPEGLLVDAAWLSKHGYATSLVSKYVAAGYLERPAGRVYRKPRGA 60 M +Q GKLN+L+RDLPE LLVDAAW+ HGY++SL S+YV AG+L+ P RVYR+ RG Sbjct: 4 MASQTLGKLNRLQRDLPESLLVDAAWMEAHGYSSSLRSQYVRAGWLDSPTRRVYRRSRGP 63 Query: 61 LSWEQAVISLQTLLYRTPLAVGGRTALALQGYEHYLPRATQQVHLYGPSAPPGWLSKLPL 120 L+WEQAVISLQ+LL PL VGGRTAL QGY HYL ++VHLYGPS PP WL LPL Sbjct: 64 LTWEQAVISLQSLL-DLPLTVGGRTALEQQGYAHYLSITVREVHLYGPSRPPTWLDSLPL 122 Query: 121 SIRFVFHNSAALFSPEAGLPPKGDLDRANAAAEKEAAEKGFVIQSWGQWRWPLVVSSPER 180 + F +HNS LF + +PP+ A + ++ G + P+ SS ER Sbjct: 123 DVSFRWHNSLRLFPVDGEIPPE--------PAPRMSSTAGTTL--------PIRCSSKER 166 Query: 181 ALLEVLDELPDHESFETADKLVESLSTLSPRRMQTLLQACQSVKAKRLLFFFADRHSHAW 240 A+LE+LDELP HESF D L+E +S LSPRR+QTLL+AC SVK KRL FFADRH HAW Sbjct: 167 AVLELLDELP-HESFHQVDMLMEGMSDLSPRRLQTLLEACASVKVKRLFLFFADRHGHAW 225 Query: 241 KNKINKDHVDLGSGKRMLVKGGVLDRTYQITVPKGL 276 ++K++ +DLGSGKR+LVKGG LDR Y ITVP L Sbjct: 226 RSKLDVSRLDLGSGKRVLVKGGKLDRRYNITVPSDL 261 >ref|ZP_05121861.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] gb|EEE36493.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11] Length = 283 Score = 298 bits (762), Expect = 8e-79, Method: Compositional matrix adjust. Identities = 155/282 (54%), Positives = 190/282 (67%), Gaps = 5/282 (1%) Query: 1 MTTQLPGKLNQLRRDLPEGLLVDAAWLSKHGYATSLVSKYVAAGYLERPAGRVYRKPRGA 60 MT Q LNQL ++LPEGLLVDAAWL K G A++L + YV +G+L++PA VY++P G+ Sbjct: 1 MTEQKASHLNQLEKNLPEGLLVDAAWLEKQGIASNLRAYYVKSGWLKQPARGVYQRPYGS 60 Query: 61 LSWEQAVISLQTLLYRTPLAVGGRTALALQGYEHYLPRATQQVHLYGPSAPPGWLSKLPL 120 LSW+Q VISLQ LL PL VGGRTAL LQGY HYL + T+ V+LYGP P WL KL L Sbjct: 61 LSWQQVVISLQNLL-NVPLVVGGRTALELQGYAHYLVQETKVVYLYGPEKPLSWLGKLNL 119 Query: 121 SIRFVFHNSAALFSPE---AGLPP-KGDLDRANAAAEKEAAEKGFVIQSWGQWRWPLVVS 176 F + NS LF + +GL D+++ K+ G SWGQW WPL +S Sbjct: 120 PQEFRYRNSKNLFKNDPITSGLSSLVWDVEKNTGTDHKKLQGGGLDRISWGQWDWPLTLS 179 Query: 177 SPERALLEVLDELPDHESFETADKLVESLSTLSPRRMQTLLQACQSVKAKRLLFFFADRH 236 PERA LE+LDELP ESF AD L++ + SPRR+Q LL C SVK KRL F+FADRH Sbjct: 180 KPERAYLEMLDELPSRESFHQADMLMQGAANFSPRRLQKLLADCTSVKVKRLFFYFADRH 239 Query: 237 SHAWKNKINKDHVDLGSGKRMLVKGGVLDRTYQITVPKGLDA 278 HAW +++K+ VDLG GKRMLVKGG LD TY ITVP+ LD Sbjct: 240 EHAWLKRVDKEAVDLGKGKRMLVKGGRLDPTYLITVPEDLDG 281