BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0019.0005.p (391 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001241393.1| putative flagellin protein, C-terminus [Brad... 337 2e-90 ref|YP_001206969.1| putative flagellin protein, C-terminus [Brad... 337 2e-90 ref|YP_001206968.1| putative flagellin protein, C-terminus [Brad... 333 2e-89 ref|YP_001208806.1| hypothetical protein BRADO7005 [Bradyrhizobi... 331 1e-88 ref|ZP_08630680.1| flagellar hook-associated protein [Bradyrhizo... 330 3e-88 >ref|YP_001241393.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1] gb|ABQ37487.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. BTAi1] Length = 523 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 193/282 (68%), Positives = 224/282 (79%), Gaps = 4/282 (1%) Query: 114 TSTAALGGTSANLVDGTTIKSGDVLAIAASAGQPAFSFTFGASTS----LAQLNTSLAAS 169 T+ A LG T+A SG L IA++ G A + TFG S LAQLNT+LA++ Sbjct: 242 TALAKLGLTAATTTRNAPALSGQTLTIASTGGGVATNITFGTGASQISTLAQLNTALASN 301 Query: 170 NLTASLDSSNKLVITTTNDAASSTIGAVTFTNTGGGTATFSAAGTAPVADQASQSARAAL 229 NL ASL ++ +L I TTN+AASSTIGAV ++T A + PVAD SQ+ RA L Sbjct: 302 NLQASLSTTGQLTILTTNEAASSTIGAVAGSSTASSMAFNGVTASTPVADTNSQTTRAGL 361 Query: 230 VTQYNNTIAQITTTAQDASFNGINLLNGDSLKLTFNETGKSTLSITGVTFNASGLGLKAL 289 + QYNN +AQI TTAQDASFNGINLLNGD+LKL FNETG+STL+ITGVTFN++GLGL AL Sbjct: 362 IAQYNNVLAQINTTAQDASFNGINLLNGDTLKLVFNETGRSTLNITGVTFNSTGLGLSAL 421 Query: 290 TAGTDFLDNNSANSVISSLSSASSALRSEASTLGSNLSIVQIRQDFSKNLINVLQTGSSN 349 GTDFLD+NSAN V+S+L+SAS+A+RSEAS+LGSNLSIVQIRQDF+KNLINVLQTGSSN Sbjct: 422 VVGTDFLDSNSANKVLSTLNSASTAIRSEASSLGSNLSIVQIRQDFNKNLINVLQTGSSN 481 Query: 350 LTLADTNEEAANSQALSTRQSIAVSALALANQSQQSVLQLLR 391 LTLADTNEEAANSQALSTRQSIAVSALALANQSQ SVLQLLR Sbjct: 482 LTLADTNEEAANSQALSTRQSIAVSALALANQSQASVLQLLR 523 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 97/125 (77%), Positives = 111/125 (88%) Query: 3 MSDIILSSSVRQNLLSLQSTADLLSTTQNRLATGKKVNTALDNPTNFFTAQSLDNRASDI 62 MS I+LS+SVRQNLL+LQ+TA LL+TTQN LATG KVNTALDNPT FFTAQSL+NRASDI Sbjct: 1 MSGIVLSASVRQNLLALQNTASLLATTQNNLATGNKVNTALDNPTEFFTAQSLNNRASDI 60 Query: 63 NNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQVLQSPTGYTTRSQVTSTAALGGT 122 NLLD IGNGVQVLQAANTG+TSLQKLVD+AKSIA+QVLQ+PTGYTT+S +TS G T Sbjct: 61 ANLLDSIGNGVQVLQAANTGLTSLQKLVDSAKSIASQVLQAPTGYTTKSSITSAVIPGAT 120 Query: 123 SANLV 127 + NL+ Sbjct: 121 ANNLL 125 >ref|YP_001206969.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278] emb|CAL78752.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278] Length = 516 Score = 337 bits (864), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 190/268 (70%), Positives = 213/268 (79%), Gaps = 16/268 (5%) Query: 134 SGDVLAIAASAGQPAFSFTFGAST----SLAQLNTSLAASNLTASLDSSNKLVITTTNDA 189 +G L + A+ G A S TFG T SL LNT LAA+NL AS+DSS K+ +TTTNDA Sbjct: 255 AGQTLTVGATGGGTATSITFGLGTGQVNSLNDLNTKLAANNLQASIDSSGKITLTTTNDA 314 Query: 190 ASSTIGAVTFTNTGGGTATFSA------AGTAPVADQASQSARAALVTQYNNTIAQITTT 243 AS+TIG + GGTA S+ APVAD +Q+ RA+LV+QYNN +AQI TT Sbjct: 315 ASATIGTI------GGTAAASSQSFNGLTAAAPVADSTAQAQRASLVSQYNNVLAQINTT 368 Query: 244 AQDASFNGINLLNGDSLKLTFNETGKSTLSITGVTFNASGLGLKALTAGTDFLDNNSANS 303 A DASFNG+NLLNGD+LKLTFNE GKSTLSITGVTFN GLGL LT+GTDFLDNNSAN Sbjct: 369 AADASFNGVNLLNGDTLKLTFNENGKSTLSITGVTFNTGGLGLSTLTSGTDFLDNNSANK 428 Query: 304 VISSLSSASSALRSEASTLGSNLSIVQIRQDFSKNLINVLQTGSSNLTLADTNEEAANSQ 363 VI L++ASS LRSEASTLGSNLS+VQIRQDF+KNLINVLQTGSSNLTLADTNEEAANSQ Sbjct: 429 VIGVLNTASSTLRSEASTLGSNLSVVQIRQDFNKNLINVLQTGSSNLTLADTNEEAANSQ 488 Query: 364 ALSTRQSIAVSALALANQSQQSVLQLLR 391 ALSTRQSIAVSAL+LANQSQ SVLQLLR Sbjct: 489 ALSTRQSIAVSALSLANQSQASVLQLLR 516 Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 103/127 (81%), Positives = 115/127 (90%) Query: 1 MKMSDIILSSSVRQNLLSLQSTADLLSTTQNRLATGKKVNTALDNPTNFFTAQSLDNRAS 60 MKMS I+LS+SVRQNLLSLQSTA LL+TTQN L+TGKKVN+ALDNPTNFFTAQ LDNRAS Sbjct: 1 MKMSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRAS 60 Query: 61 DINNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQVLQSPTGYTTRSQVTSTAALG 120 DI+NLLDGIGNGVQVLQAANTGITSLQKLVD+AKSIANQVLQS GY+T+S VTS A G Sbjct: 61 DISNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSSVGYSTKSSVTSAALTG 120 Query: 121 GTSANLV 127 T+ +L+ Sbjct: 121 ATATSLL 127 >ref|YP_001206968.1| putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278] emb|CAL78751.1| Putative flagellin protein, C-terminus [Bradyrhizobium sp. ORS 278] Length = 524 Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 185/262 (70%), Positives = 216/262 (82%), Gaps = 4/262 (1%) Query: 134 SGDVLAIAASAGQPAFSFTFGASTS----LAQLNTSLAASNLTASLDSSNKLVITTTNDA 189 +G L IA++ G A + TFG S LAQLNT+LAA+NL ASL ++ +L I TTN+A Sbjct: 263 TGQTLTIASTGGGVATNITFGTGASQISTLAQLNTALAANNLQASLSTTGQLTILTTNEA 322 Query: 190 ASSTIGAVTFTNTGGGTATFSAAGTAPVADQASQSARAALVTQYNNTIAQITTTAQDASF 249 ASSTIG V ++T A + PVAD SQ+ RA L+ QYNN +AQI TTAQDASF Sbjct: 323 ASSTIGTVAGSSTAASQAFNGVTASTPVADTNSQTTRAGLIAQYNNVLAQINTTAQDASF 382 Query: 250 NGINLLNGDSLKLTFNETGKSTLSITGVTFNASGLGLKALTAGTDFLDNNSANSVISSLS 309 NGINLLNGD+LKLTFNETG+STL+ITGVTFN++GLGL +L GTDFLD+NSAN V+++L+ Sbjct: 383 NGINLLNGDTLKLTFNETGRSTLNITGVTFNSTGLGLSSLVVGTDFLDSNSANKVLTTLN 442 Query: 310 SASSALRSEASTLGSNLSIVQIRQDFSKNLINVLQTGSSNLTLADTNEEAANSQALSTRQ 369 SAS+A+RSEAS+LGSNLSIVQIRQDF+KNLINVLQTGSSNLTLADTNEEAANSQALSTRQ Sbjct: 443 SASTAIRSEASSLGSNLSIVQIRQDFNKNLINVLQTGSSNLTLADTNEEAANSQALSTRQ 502 Query: 370 SIAVSALALANQSQQSVLQLLR 391 SIAVSALALANQSQ SVLQLLR Sbjct: 503 SIAVSALALANQSQASVLQLLR 524 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 97/125 (77%), Positives = 111/125 (88%) Query: 3 MSDIILSSSVRQNLLSLQSTADLLSTTQNRLATGKKVNTALDNPTNFFTAQSLDNRASDI 62 MS I+LS+SVRQNLL+LQ+TA LL+TTQN LATG KVNTALDNPT FFTAQSL+NRASDI Sbjct: 1 MSGIVLSASVRQNLLALQNTASLLATTQNNLATGNKVNTALDNPTEFFTAQSLNNRASDI 60 Query: 63 NNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQVLQSPTGYTTRSQVTSTAALGGT 122 NLLD IGNGVQVLQAANTG+TSLQKLVD+AKSIA+QVLQ+PTGYTT+S +TS G T Sbjct: 61 ANLLDSIGNGVQVLQAANTGLTSLQKLVDSAKSIASQVLQAPTGYTTKSSITSAVIPGAT 120 Query: 123 SANLV 127 + NL+ Sbjct: 121 ANNLL 125 >ref|YP_001208806.1| hypothetical protein BRADO7005 [Bradyrhizobium sp. ORS 278] emb|CAL80591.1| conserved hypothetical protein; putative flagellin C-ter domain [Bradyrhizobium sp. ORS 278] Length = 523 Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 190/269 (70%), Positives = 214/269 (79%), Gaps = 17/269 (6%) Query: 134 SGDVLAIAASAGQPAFSFTFGAST----SLAQLNTSLAASNLTASLDSS-NKLVITTTND 188 SG L + A+AG A S TFG T SL LN LAA+NL A++DSS K+ ITTTND Sbjct: 261 SGQTLTVGATAGGTATSITFGLGTGQVKSLNDLNAKLAANNLQATVDSSTGKITITTTND 320 Query: 189 AASSTIGAVTFTNTGGGTATFSA------AGTAPVADQASQSARAALVTQYNNTIAQITT 242 AAS+TIG + GGTA S+ APVAD +Q+ RA LV+QYNN +AQI T Sbjct: 321 AASATIGTI------GGTAAASSQSFNGLTAAAPVADSTAQTQRANLVSQYNNVLAQINT 374 Query: 243 TAQDASFNGINLLNGDSLKLTFNETGKSTLSITGVTFNASGLGLKALTAGTDFLDNNSAN 302 TA D+SFNGINLLNGD+LKLTFNETGKSTLSITGVTFN++GLGL LT+GTDFLDNNSAN Sbjct: 375 TAADSSFNGINLLNGDTLKLTFNETGKSTLSITGVTFNSAGLGLSTLTSGTDFLDNNSAN 434 Query: 303 SVISSLSSASSALRSEASTLGSNLSIVQIRQDFSKNLINVLQTGSSNLTLADTNEEAANS 362 VI L++ASS LR EASTLGSNLS+VQ+RQDF+KNLINVLQTGSSNLTLADTNEEAANS Sbjct: 435 KVIKVLNTASSTLRDEASTLGSNLSVVQVRQDFNKNLINVLQTGSSNLTLADTNEEAANS 494 Query: 363 QALSTRQSIAVSALALANQSQQSVLQLLR 391 QALSTRQSIAVSAL+LANQSQ SVLQLLR Sbjct: 495 QALSTRQSIAVSALSLANQSQASVLQLLR 523 Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust. Identities = 102/127 (80%), Positives = 114/127 (89%) Query: 1 MKMSDIILSSSVRQNLLSLQSTADLLSTTQNRLATGKKVNTALDNPTNFFTAQSLDNRAS 60 M MS I+LS+SVRQNLLSLQSTA LL+TTQN L+TGKKVN+ALDNPTNFFTAQ LDNRAS Sbjct: 7 MTMSGIVLSASVRQNLLSLQSTAQLLATTQNNLSTGKKVNSALDNPTNFFTAQGLDNRAS 66 Query: 61 DINNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQVLQSPTGYTTRSQVTSTAALG 120 DI+NLLDGIGNGVQVLQAANTGITSLQKLVD+AKSIANQVLQS GY+T+S VTS A G Sbjct: 67 DISNLLDGIGNGVQVLQAANTGITSLQKLVDSAKSIANQVLQSAVGYSTKSSVTSAALSG 126 Query: 121 GTSANLV 127 T+ +L+ Sbjct: 127 ATATDLL 133 >ref|ZP_08630680.1| flagellar hook-associated protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06534.1| flagellar hook-associated protein [Bradyrhizobiaceae bacterium SG-6C] Length = 665 Score = 330 bits (845), Expect = 3e-88, Method: Compositional matrix adjust. Identities = 190/282 (67%), Positives = 215/282 (76%), Gaps = 19/282 (6%) Query: 115 STAALGGTSANLVDGTTIKSGDVLAIAASAGQPAFSFTFGAST-----SLAQLNTSLAAS 169 ST+ALGG + N IA++ G A + TFG T +L QLN +L+A+ Sbjct: 398 STSALGGLTLN--------------IASTGGGAATTITFGDGTGGTVKTLNQLNAALSAN 443 Query: 170 NLTASLDSSNKLVITTTNDAASSTIGAVTFTNTGGGTATFSAAGTAPVADQASQSARAAL 229 NL AS+ + K+ ITT+ND ASSTIGA+T T T G A A G APV D +Q+ RA L Sbjct: 444 NLQASISTDGKITITTSNDFASSTIGAITGTATNSGNAFVGATGGAPVVDAVAQTTRANL 503 Query: 230 VTQYNNTIAQITTTAQDASFNGINLLNGDSLKLTFNETGKSTLSITGVTFNASGLGLKAL 289 VTQYNN I QI TTAQDASFNG+NLLNGD LKL FNETGKSTLSITGV FN +GLGL L Sbjct: 504 VTQYNNVIDQIRTTAQDASFNGVNLLNGDQLKLVFNETGKSTLSITGVNFNPAGLGLGTL 563 Query: 290 TAGTDFLDNNSANSVISSLSSASSALRSEASTLGSNLSIVQIRQDFSKNLINVLQTGSSN 349 TAGTDF+DN + N V++SL+ ASS LR +AS LGSNLSIVQIRQDFSK+LINVLQTGSSN Sbjct: 564 TAGTDFIDNAATNKVLASLNDASSTLRGQASALGSNLSIVQIRQDFSKSLINVLQTGSSN 623 Query: 350 LTLADTNEEAANSQALSTRQSIAVSALALANQSQQSVLQLLR 391 LTLADTNEEAANSQALSTRQSIAVSALALANQSQQSVLQLLR Sbjct: 624 LTLADTNEEAANSQALSTRQSIAVSALALANQSQQSVLQLLR 665 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 102/124 (82%), Positives = 112/124 (90%) Query: 3 MSDIILSSSVRQNLLSLQSTADLLSTTQNRLATGKKVNTALDNPTNFFTAQSLDNRASDI 62 MS I+LS+SVRQNLLSLQSTADLLSTTQ RLATGKKVNTALDNPTNFFTA LD+RASDI Sbjct: 1 MSSIVLSASVRQNLLSLQSTADLLSTTQTRLATGKKVNTALDNPTNFFTAAGLDSRASDI 60 Query: 63 NNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQVLQSPTGYTTRSQVTSTAALGGT 122 NNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQ LQ+ GY+++S VT+TA G T Sbjct: 61 NNLLDGIGNGVQVLQAANTGITSLQKLVDTAKSIANQALQTTVGYSSKSSVTTTAISGAT 120 Query: 123 SANL 126 + +L Sbjct: 121 ADDL 124