BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0009.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001203618.1| putative Asp/Glu/Hydantoin racemase [Bradyrh... 303 2e-80 ref|YP_001242357.1| hypothetical protein BBta_6543 [Bradyrhizobi... 298 7e-79 ref|YP_002490108.1| Asp/Glu/hydantoin racemase [Methylobacterium... 293 2e-77 ref|YP_001527288.1| Asp/Glu racemase [Azorhizobium caulinodans O... 288 7e-76 ref|ZP_07673766.1| Asp/Glu racemase [Ralstonia sp. 5_7_47FAA] >g... 270 1e-70 >ref|YP_001203618.1| putative Asp/Glu/Hydantoin racemase [Bradyrhizobium sp. ORS 278] emb|CAL75381.1| Conserved hypothetical protein; putative Asp/Glu/Hydantoin racemase [Bradyrhizobium sp. ORS 278] Length = 242 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/238 (63%), Positives = 174/238 (73%) Query: 1 MTRPVRLGMLTPSSNTALEPITCAMLSGIDDVSAHFSRFKVTEIALSEQALRQFDASEIL 60 MT+ LGMLTPSSNTALEPIT AM++G+ +VSAHFSRFKVTEIALS AL QFD S IL Sbjct: 1 MTKRTLLGMLTPSSNTALEPITSAMVAGLPNVSAHFSRFKVTEIALSTDALAQFDISNIL 60 Query: 61 RAAELLAHAKVDVIAWNGTSASWLGFDRDESLCEEIMAATGIKACTTVLAYRDLLRRIGA 120 RAAELLAHAKVDVI WNGTS+ WLGFD D LCE+I AATGI A T++LA ++L A Sbjct: 61 RAAELLAHAKVDVIGWNGTSSGWLGFDADVRLCEQITAATGIPATTSMLALNEILTTAKA 120 Query: 121 SRIGLVTPYRKDVQERIIANWNSQGLHCFAERHLSLQDNFSFAEVREAEIARLIEEVVRE 180 +GLVTPYR DVQ RIIAN+ G+ C +RHL+LQDNFSFAEV EI +I EV RE Sbjct: 121 KTLGLVTPYRDDVQARIIANYAKLGIACRGDRHLNLQDNFSFAEVTPTEIETMIREVARE 180 Query: 181 GCDAAVVLCTNMRGAGAAERLERRFGVPVLDSIAVTLWACLTAAGCVPSRVQGWGSLF 238 DA V+CTNMR A A RLE G+P+LD+IA +W L AG P V WGSLF Sbjct: 181 KPDAIAVVCTNMRAAPLAARLELETGIPILDTIATVVWKSLKLAGVDPRGVSEWGSLF 238 >ref|YP_001242357.1| hypothetical protein BBta_6543 [Bradyrhizobium sp. BTAi1] gb|ABQ38451.1| hypothetical protein BBta_6543 [Bradyrhizobium sp. BTAi1] Length = 242 Score = 298 bits (762), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 149/238 (62%), Positives = 173/238 (72%) Query: 1 MTRPVRLGMLTPSSNTALEPITCAMLSGIDDVSAHFSRFKVTEIALSEQALRQFDASEIL 60 MT+ LGMLTPSSNTALEPIT AM++G+ +VSAHFSRFKVTEIALS AL QFD S IL Sbjct: 1 MTKRTLLGMLTPSSNTALEPITSAMVAGLPNVSAHFSRFKVTEIALSSDALAQFDTSNIL 60 Query: 61 RAAELLAHAKVDVIAWNGTSASWLGFDRDESLCEEIMAATGIKACTTVLAYRDLLRRIGA 120 RAAELLAHAKVDVI WNGTS+ WLGF+ D LCE+I AATGI A T++LA ++L A Sbjct: 61 RAAELLAHAKVDVIGWNGTSSGWLGFETDVKLCEQITAATGIPATTSMLALNEILAASKA 120 Query: 121 SRIGLVTPYRKDVQERIIANWNSQGLHCFAERHLSLQDNFSFAEVREAEIARLIEEVVRE 180 + +GLVTPYR DVQ RIIAN+ G+ C +RHL+LQDNFSFAEV AEI +I EV RE Sbjct: 121 TTLGLVTPYRDDVQARIIANYAKLGIACRGDRHLNLQDNFSFAEVTPAEIETMIREVARE 180 Query: 181 GCDAAVVLCTNMRGAGAAERLERRFGVPVLDSIAVTLWACLTAAGCVPSRVQGWGSLF 238 DA V+CTNMR A RLE G+P+LD+IA +W L AG WGSLF Sbjct: 181 TPDAIAVVCTNMRAAPLVARLELETGIPILDTIATVVWKSLKLAGVDTRGASEWGSLF 238 >ref|YP_002490108.1| Asp/Glu/hydantoin racemase [Methylobacterium nodulans ORS 2060] gb|ACL62941.1| Asp/Glu/hydantoin racemase [Methylobacterium nodulans ORS 2060] Length = 259 Score = 293 bits (749), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 140/249 (56%), Positives = 176/249 (70%), Gaps = 1/249 (0%) Query: 3 RPVRLGMLTPSSNTALEPITCAMLSGIDDVSAHFSRFKVTEIALSEQALRQFDASEILRA 62 +P+RLGMLTPSSNT LEP+ A ++ D+S H+SRF+VTEI+LS+Q L QF +++A Sbjct: 8 KPIRLGMLTPSSNTVLEPV-LARMTAQTDISVHYSRFRVTEISLSQQGLGQFAFDAMVQA 66 Query: 63 AELLAHAKVDVIAWNGTSASWLGFDRDESLCEEIMAATGIKACTTVLAYRDLLRRIGASR 122 AELLAHAKVDVIAWNGTSA WLGF +DE LC I A TGI A ++VLA+RD R +G R Sbjct: 67 AELLAHAKVDVIAWNGTSAGWLGFPQDEELCARITATTGILATSSVLAFRDAFRSLGTKR 126 Query: 123 IGLVTPYRKDVQERIIANWNSQGLHCFAERHLSLQDNFSFAEVREAEIARLIEEVVREGC 182 +GLVTPY DVQ RI ANW + G C AERHL L DNFSFAE IA L+ +V R+GC Sbjct: 127 VGLVTPYTTDVQRRITANWEAAGFPCTAERHLGLADNFSFAETTGEVIADLVRQVARDGC 186 Query: 183 DAAVVLCTNMRGAGAAERLERRFGVPVLDSIAVTLWACLTAAGCVPSRVQGWGSLFTNPD 242 +AA ++CTNMRGA A LER G+PV+DS+AVTLWA L G WG +F+ + Sbjct: 187 EAAAIVCTNMRGAAVAPMLERELGIPVIDSVAVTLWASLRLIGAATGDFVDWGQIFSISN 246 Query: 243 LRAATAIHV 251 + +++V Sbjct: 247 AASGASLNV 255 >ref|YP_001527288.1| Asp/Glu racemase [Azorhizobium caulinodans ORS 571] dbj|BAF90370.1| Asp/Glu racemase [Azorhizobium caulinodans ORS 571] Length = 241 Score = 288 bits (736), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 139/238 (58%), Positives = 176/238 (73%) Query: 1 MTRPVRLGMLTPSSNTALEPITCAMLSGIDDVSAHFSRFKVTEIALSEQALRQFDASEIL 60 MT+ V LGMLTPSSNT LEP+T AM++G+ +VSAHF RFKVTEIALS+ AL+QFD +EIL Sbjct: 1 MTKRVLLGMLTPSSNTVLEPVTQAMVAGLPEVSAHFGRFKVTEIALSDTALKQFDDTEIL 60 Query: 61 RAAELLAHAKVDVIAWNGTSASWLGFDRDESLCEEIMAATGIKACTTVLAYRDLLRRIGA 120 RAAELLAHAKVDVI+WNGTS+ WLGF+ DE LCE I AATGI A T++LA ++L GA Sbjct: 61 RAAELLAHAKVDVISWNGTSSGWLGFEADERLCERITAATGIPANTSMLALNEILAAKGA 120 Query: 121 SRIGLVTPYRKDVQERIIANWNSQGLHCFAERHLSLQDNFSFAEVREAEIARLIEEVVRE 180 +G VTPY VQE+I+AN+ + G C +RHL+LQDNFSF+EV +++ + +V E Sbjct: 121 KTLGYVTPYLDAVQEKIVANYAALGHACKGDRHLNLQDNFSFSEVTAEQLSAMTRDVAAE 180 Query: 181 GCDAAVVLCTNMRGAGAAERLERRFGVPVLDSIAVTLWACLTAAGCVPSRVQGWGSLF 238 DA V+CTN+R A E+LE G+P+ D+IA ++W L AG RV GWGSLF Sbjct: 181 KPDAIAVICTNLRAAPLVEKLEAETGIPIYDTIATSVWKSLKMAGVDTRRVTGWGSLF 238 >ref|ZP_07673766.1| Asp/Glu racemase [Ralstonia sp. 5_7_47FAA] gb|EFP67970.1| Asp/Glu racemase [Ralstonia sp. 5_7_47FAA] Length = 242 Score = 270 bits (690), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 132/240 (55%), Positives = 164/240 (68%) Query: 1 MTRPVRLGMLTPSSNTALEPITCAMLSGIDDVSAHFSRFKVTEIALSEQALRQFDASEIL 60 MT+ ++LGMLTPSSNTALEPIT AM+SG+ +VSAHFSRF VTEI+L +QAL QFD IL Sbjct: 1 MTKRIKLGMLTPSSNTALEPITSAMVSGLPNVSAHFSRFTVTEISLRDQALGQFDLENIL 60 Query: 61 RAAELLAHAKVDVIAWNGTSASWLGFDRDESLCEEIMAATGIKACTTVLAYRDLLRRIGA 120 AA+LLA A VDVIAWNGTS+ WLGF++DE+LC +I ATGI A T+VLA ++L + GA Sbjct: 61 NAAKLLADAHVDVIAWNGTSSGWLGFEKDEALCRQITEATGIPATTSVLALNEILAKTGA 120 Query: 121 SRIGLVTPYRKDVQERIIANWNSQGLHCFAERHLSLQDNFSFAEVREAEIARLIEEVVRE 180 LVTPY DVQ+RI+ N+ G C AERHL L N SFA+V E I L+ EV ++ Sbjct: 121 RDFALVTPYLDDVQQRIVQNYARHGFKCVAERHLDLHVNHSFADVEEVTIRTLVREVAQQ 180 Query: 181 GCDAAVVLCTNMRGAGAAERLERRFGVPVLDSIAVTLWACLTAAGCVPSRVQGWGSLFTN 240 A CTN+R A E LE G+PV D+I+ +W L AG + GWG LF + Sbjct: 181 KPAAITTFCTNLRAAHLVEALEAETGIPVYDTISTVVWKSLRLAGVDTRELHGWGRLFAD 240