BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0008.p (252 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769930.1| transcriptional regulator [Bradyrhizobium japon... 207 9e-52 ref|YP_003696158.1| GntR family transcriptional regulator [Stark... 206 3e-51 ref|YP_002490104.1| transcriptional regulator, GntR family [Meth... 205 5e-51 ref|YP_001753930.1| GntR family transcriptional regulator [Methy... 185 5e-45 ref|YP_001767464.1| GntR family transcriptional regulator [Methy... 178 8e-43 >ref|NP_769930.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC48555.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 119/218 (54%), Positives = 151/218 (69%) Query: 6 RRRLRVPRVGLHEQAAARLRTMIVRGELAPGQSLGEADLSDALGISRTPLREALKQLASE 65 R+ ++ R+GLHE+AAAR+RTMI+RGEL PG E LS LG+SRTPLREA+K LA+E Sbjct: 34 RKSPKLKRMGLHERAAARMRTMIIRGELPPGSQTQETRLSKELGVSRTPLREAMKVLAAE 93 Query: 66 GLVELRLNHSAVVAPFRRAELAELFEAVSGIERCAAELAALRMEPEDFERLAALQDKIEW 125 GL+ELR N S +A ++ELFEA+SGIER AAELAA R D RL LQ ++E Sbjct: 94 GLIELRPNRSPRIADIAVDGISELFEALSGIERLAAELAAERATERDLARLRTLQTRMEG 153 Query: 126 HHGRGELRDYFQVNQQIHSAIVGFARNAVLKATHEALLARAERARFFALSVLGRWDESVR 185 HH G+L DYF +N +IH+ IV ARN L+ HE L++RAERAR+ AL RW SV Sbjct: 154 HHRNGKLDDYFAINGEIHNTIVRMARNTPLREAHETLISRAERARYLALGANSRWSNSVD 213 Query: 186 EHQEILAALKRRDAARAGQILAHHVRRTGEIVAETLDA 223 EH +ILAAL+ RD+ AG++L HVRRTG + E + A Sbjct: 214 EHADILAALEARDSEAAGRLLGAHVRRTGTALLEVIAA 251 >ref|YP_003696158.1| GntR family transcriptional regulator [Starkeya novella DSM 506] gb|ADH91539.1| transcriptional regulator, GntR family [Starkeya novella DSM 506] Length = 248 Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 114/212 (53%), Positives = 145/212 (68%) Query: 10 RVPRVGLHEQAAARLRTMIVRGELAPGQSLGEADLSDALGISRTPLREALKQLASEGLVE 69 R+PR GLHE+AA +LR+MIV G+L G + EA+L +ALGISRTPLREA+K LA+ GLVE Sbjct: 27 RLPRAGLHERAARQLRSMIVAGKLPGGAPIVEAELCEALGISRTPLREAVKMLAAHGLVE 86 Query: 70 LRLNHSAVVAPFRRAELAELFEAVSGIERCAAELAALRMEPEDFERLAALQDKIEWHHGR 129 LR N SA VAP + + +LFEA+ +ER AAE AALR+ + L +Q+ +E H+G Sbjct: 87 LRPNRSARVAPMDASHVTDLFEALGNVERIAAEYAALRLTATELLSLRQMQETMERHYGE 146 Query: 130 GELRDYFQVNQQIHSAIVGFARNAVLKATHEALLARAERARFFALSVLGRWDESVREHQE 189 G+L YF VNQ IHSAI+ A NA H L RAERAR+FAL RW ES++EH++ Sbjct: 147 GDLAAYFAVNQAIHSAILAGAHNATFVEMHRWLFTRAERARYFALGRHSRWVESIQEHRD 206 Query: 190 ILAALKRRDAARAGQILAHHVRRTGEIVAETL 221 ILAAL+ RD AG++LA HV TG V L Sbjct: 207 ILAALEARDGYLAGRLLAAHVLHTGTNVLAML 238 >ref|YP_002490104.1| transcriptional regulator, GntR family [Methylobacterium nodulans ORS 2060] gb|ACL62937.1| transcriptional regulator, GntR family [Methylobacterium nodulans ORS 2060] Length = 221 Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust. Identities = 114/209 (54%), Positives = 146/209 (69%) Query: 13 RVGLHEQAAARLRTMIVRGELAPGQSLGEADLSDALGISRTPLREALKQLASEGLVELRL 72 R GLHE+AA RLR MIVRG+LAPG +L E +LS+ LGISRTP+REA+K LA +GLVELR Sbjct: 2 RAGLHERAAERLRNMIVRGDLAPGAALIEVELSEMLGISRTPIREAIKLLAQQGLVELRA 61 Query: 73 NHSAVVAPFRRAELAELFEAVSGIERCAAELAALRMEPEDFERLAALQDKIEWHHGRGEL 132 N S V P R AE+ ELFEA++GIER AAE AA+R+ + +RL LQ +I H G Sbjct: 62 NRSPCVRPLRVAEIRELFEALAGIERIAAEFAAMRITEAELKRLHELQAEIVREHKAGRR 121 Query: 133 RDYFQVNQQIHSAIVGFARNAVLKATHEALLARAERARFFALSVLGRWDESVREHQEILA 192 Y N+ IH IV ARNA L H ALL+RAE+ R FAL + RW++S+ EHQ IL Sbjct: 122 DSYSAANRTIHRTIVLAARNAPLAEAHAALLSRAEQVRVFALGLEDRWEQSILEHQAILD 181 Query: 193 ALKRRDAARAGQILAHHVRRTGEIVAETL 221 AL+ RD+ +AG++L HV +T ++VA +L Sbjct: 182 ALETRDSGQAGRLLQEHVGQTADVVAASL 210 >ref|YP_001753930.1| GntR family transcriptional regulator [Methylobacterium radiotolerans JCM 2831] gb|ACB23247.1| transcriptional regulator, GntR family [Methylobacterium radiotolerans JCM 2831] Length = 242 Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 119/221 (53%), Positives = 145/221 (65%) Query: 10 RVPRVGLHEQAAARLRTMIVRGELAPGQSLGEADLSDALGISRTPLREALKQLASEGLVE 69 +VPR LH QAAARL+ MIVRG L G +L E DLS ALGISRTPLREALK LA+EGLVE Sbjct: 21 QVPRTALHAQAAARLKDMIVRGALPAGATLVETDLSAALGISRTPLREALKLLAAEGLVE 80 Query: 70 LRLNHSAVVAPFRRAELAELFEAVSGIERCAAELAALRMEPEDFERLAALQDKIEWHHGR 129 L N SA V + E+ ELFEA++GIER AELAA R+ + ++L Q +++ H Sbjct: 81 LHQNRSARVPDWTPEEILELFEALAGIERLTAELAAPRISEDLMDQLRGKQAQLDRMHRD 140 Query: 130 GELRDYFQVNQQIHSAIVGFARNAVLKATHEALLARAERARFFALSVLGRWDESVREHQE 189 L YF +NQ+IH IV ARN L H AL ARA+ AR ALS RW+ES REH++ Sbjct: 141 QVLDAYFALNQEIHRTIVTAARNRPLAEAHAALQARAQWARLRALSSGSRWEESAREHRD 200 Query: 190 ILAALKRRDAARAGQILAHHVRRTGEIVAETLDAKMLDAEA 230 + AL RDAA AG + HV RTG ++AETL A+ D A Sbjct: 201 LFEALAARDAAAAGSVAHRHVLRTGVVIAETLQARRADPAA 241 >ref|YP_001767464.1| GntR family transcriptional regulator [Methylobacterium sp. 4-46] gb|ACA15030.1| transcriptional regulator, GntR family [Methylobacterium sp. 4-46] Length = 239 Score = 178 bits (451), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 114/202 (56%), Positives = 130/202 (64%) Query: 13 RVGLHEQAAARLRTMIVRGELAPGQSLGEADLSDALGISRTPLREALKQLASEGLVELRL 72 R+ LHEQA RLR MIV G L G L E +LS+ALG+SRTPLREA+K LA EGLVELR Sbjct: 25 RLSLHEQAVRRLRAMIVEGALPAGAPLVETELSEALGVSRTPLREAVKLLAMEGLVELRP 84 Query: 73 NHSAVVAPFRRAELAELFEAVSGIERCAAELAALRMEPEDFERLAALQDKIEWHHGRGEL 132 N S +A + LFEA++ IER AELAA RM +D +RL ALQ IE HH GE+ Sbjct: 85 NRSPRIAALDPEAVRALFEALAWIERAGAELAAQRMGRDDLDRLQALQAAIEAHHRNGEI 144 Query: 133 RDYFQVNQQIHSAIVGFARNAVLKATHEALLARAERARFFALSVLGRWDESVREHQEILA 192 YF N H+ IV A N L+ HEAL ARAE AR AL GRW ESV EH+ ILA Sbjct: 145 APYFAANHATHALIVACAGNPPLREAHEALHARAEIARRRALDSHGRWSESVAEHRAILA 204 Query: 193 ALKRRDAARAGQILAHHVRRTG 214 AL RD RAG +LA HV TG Sbjct: 205 ALVARDGPRAGLLLAEHVSHTG 226