BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0007.p (254 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242977.1| putative Hydantoin racemase [Bradyrhizobium ... 347 1e-93 ref|NP_769929.1| hydantoin racemase [Bradyrhizobium japonicum US... 346 2e-93 ref|YP_002490109.1| Asp/Glu/hydantoin racemase [Methylobacterium... 345 5e-93 ref|YP_001203031.1| putative Hydantoin racemase [Bradyrhizobium ... 344 8e-93 ref|YP_727516.1| hydantoin racemase [Ralstonia eutropha H16] >gi... 329 2e-88 >ref|YP_001242977.1| putative Hydantoin racemase [Bradyrhizobium sp. BTAi1] gb|ABQ39071.1| Putative Hydantoin racemase [Bradyrhizobium sp. BTAi1] Length = 249 Score = 347 bits (889), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 179/248 (72%), Positives = 196/248 (79%) Query: 1 MKILLLNPNTTADVTDLLHAAGSKVASAGTELVPVTAARGVPYIATRAEAQIGGAIALEM 60 M ILLLNPN D+TDL+ G A+ GT L+P TA RGVPYIATRAEAQIGGA+ALEM Sbjct: 1 MNILLLNPNIRTDITDLMLQVGRAAAAPGTSLIPCTAPRGVPYIATRAEAQIGGAVALEM 60 Query: 61 LAEAAPGVDAAVIAAFGDPGLFGARELFAFPVVGLAEAAMLTACMLGRRFAIVTFAGALA 120 LAE DAA+IAAFGDPGLF ARELF PV+GLAEAAMLTACM GRRFAIVTFA AL Sbjct: 61 LAERNGSFDAAIIAAFGDPGLFAARELFDVPVIGLAEAAMLTACMAGRRFAIVTFAQALG 120 Query: 121 PWYEECVAMHGLSARCAGIRALDGRFQSISQVQAEKEELLVALANRAVEQDNADVVILSG 180 PWYEECV MHGL RCAGIR LDG F+ IS VQ EKEELLV LA RAVE++ ADV+I +G Sbjct: 121 PWYEECVRMHGLMERCAGIRMLDGSFKQISDVQHEKEELLVELALRAVEENEADVLIFAG 180 Query: 181 APLAGLAAKVRDRIPVPVVDPVAAAVRQAETLAMLKPRKAVAGTFRRPDPKPTRGLAEPL 240 APL+GLAA+V RIPVPVVD V AAV+QAE L LK RKA AGTFRRP KPT GL+E L Sbjct: 181 APLSGLAARVAHRIPVPVVDQVIAAVKQAEALLALKMRKATAGTFRRPAAKPTTGLSEAL 240 Query: 241 AAIIEHRS 248 AA +EHR Sbjct: 241 AARLEHRD 248 >ref|NP_769929.1| hydantoin racemase [Bradyrhizobium japonicum USDA 110] dbj|BAC48554.1| bll3289 [Bradyrhizobium japonicum USDA 110] Length = 251 Score = 346 bits (887), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 175/248 (70%), Positives = 199/248 (80%) Query: 1 MKILLLNPNTTADVTDLLHAAGSKVASAGTELVPVTAARGVPYIATRAEAQIGGAIALEM 60 MK+LLLNPNT+ +VT L+ G + AS+GTEL+P TA RGVPYIATR EAQIGGAIALEM Sbjct: 3 MKLLLLNPNTSTEVTHLMMGVGQRAASSGTELIPCTATRGVPYIATRTEAQIGGAIALEM 62 Query: 61 LAEAAPGVDAAVIAAFGDPGLFGARELFAFPVVGLAEAAMLTACMLGRRFAIVTFAGALA 120 LAE VDAA+IAAFGDPGLF ARE F PVVG+AEAAMLTACM GRRFAIVTFA AL Sbjct: 63 LAEQHRNVDAAIIAAFGDPGLFAARETFDIPVVGMAEAAMLTACMAGRRFAIVTFAQALG 122 Query: 121 PWYEECVAMHGLSARCAGIRALDGRFQSISQVQAEKEELLVALANRAVEQDNADVVILSG 180 PWYEECV HGL RCAGIR LD FQ+IS+V EKE++LV LA RA+ +D+ADV+I +G Sbjct: 123 PWYEECVRAHGLWERCAGIRMLDTPFQAISEVGTEKEDVLVDLAQRAIVEDDADVLIFAG 182 Query: 181 APLAGLAAKVRDRIPVPVVDPVAAAVRQAETLAMLKPRKAVAGTFRRPDPKPTRGLAEPL 240 APL+GLA +V DRIPVPVVD V A+V+QAE L L+ RKA AGTFRRP KPT GLAE L Sbjct: 183 APLSGLAERVADRIPVPVVDQVVASVKQAEALHALRLRKATAGTFRRPAAKPTIGLAEAL 242 Query: 241 AAIIEHRS 248 AA +EHR Sbjct: 243 AARLEHRD 250 >ref|YP_002490109.1| Asp/Glu/hydantoin racemase [Methylobacterium nodulans ORS 2060] gb|ACL62942.1| Asp/Glu/hydantoin racemase [Methylobacterium nodulans ORS 2060] Length = 256 Score = 345 bits (884), Expect = 5e-93, Method: Compositional matrix adjust. Identities = 179/245 (73%), Positives = 202/245 (82%) Query: 2 KILLLNPNTTADVTDLLHAAGSKVASAGTELVPVTAARGVPYIATRAEAQIGGAIALEML 61 +ILLLNPNT+A++T+ + AAG A+ GT LVP+TA RGVPYIATRAEAQIGGAIALEML Sbjct: 5 RILLLNPNTSAEMTERMLAAGQSAAAPGTTLVPLTAGRGVPYIATRAEAQIGGAIALEML 64 Query: 62 AEAAPGVDAAVIAAFGDPGLFGARELFAFPVVGLAEAAMLTACMLGRRFAIVTFAGALAP 121 AE VDAA+IAAFGDPGLFGARELF PVVGLAEAAMLTACMLGRRFAIV+FA AL P Sbjct: 65 AEHHREVDAAIIAAFGDPGLFGARELFDIPVVGLAEAAMLTACMLGRRFAIVSFARALGP 124 Query: 122 WYEECVAMHGLSARCAGIRALDGRFQSISQVQAEKEELLVALANRAVEQDNADVVILSGA 181 WYEECVAMHGL+ RCAGIR LD FQ +++VQ EKE+LLV LAN++V +D ADVVIL+GA Sbjct: 125 WYEECVAMHGLAGRCAGIRLLDSPFQQVAEVQEEKEDLLVQLANKSVREDEADVVILAGA 184 Query: 182 PLAGLAAKVRDRIPVPVVDPVAAAVRQAETLAMLKPRKAVAGTFRRPDPKPTRGLAEPLA 241 PL+GLAAKV RI VPVVD VAAAV+QAE L LKPRKA GTF+RP K GL + LA Sbjct: 185 PLSGLAAKVAHRILVPVVDQVAAAVKQAEALLALKPRKATEGTFKRPPAKRVIGLPDSLA 244 Query: 242 AIIEH 246 A I H Sbjct: 245 ARITH 249 >ref|YP_001203031.1| putative Hydantoin racemase [Bradyrhizobium sp. ORS 278] emb|CAL74794.1| Putative Hydantoin racemase [Bradyrhizobium sp. ORS 278] Length = 249 Score = 344 bits (882), Expect = 8e-93, Method: Compositional matrix adjust. Identities = 177/248 (71%), Positives = 197/248 (79%) Query: 1 MKILLLNPNTTADVTDLLHAAGSKVASAGTELVPVTAARGVPYIATRAEAQIGGAIALEM 60 M ILLLNPN +D+TDL+ G A+ GT L+P TA RGVPYIATRAEAQIGGA+ALEM Sbjct: 1 MNILLLNPNIRSDITDLMLQVGRDAAAPGTTLIPCTAPRGVPYIATRAEAQIGGAVALEM 60 Query: 61 LAEAAPGVDAAVIAAFGDPGLFGARELFAFPVVGLAEAAMLTACMLGRRFAIVTFAGALA 120 LAE DAA+IAAFGDPGLF ARELF PV+GLAEAAMLTACM+GRRFAI+TFA AL Sbjct: 61 LAERNGTFDAAIIAAFGDPGLFAARELFDVPVIGLAEAAMLTACMVGRRFAIITFAQALG 120 Query: 121 PWYEECVAMHGLSARCAGIRALDGRFQSISQVQAEKEELLVALANRAVEQDNADVVILSG 180 PWYEECV MHGL RCAGIR LDG F+ IS VQ EKEELLV LA RAVE++ ADV+I +G Sbjct: 121 PWYEECVRMHGLLERCAGIRMLDGSFKQISDVQHEKEELLVELALRAVEENEADVLIFAG 180 Query: 181 APLAGLAAKVRDRIPVPVVDPVAAAVRQAETLAMLKPRKAVAGTFRRPDPKPTRGLAEPL 240 APL+GLAA+V RIPVPVVD V AAV+QAE L LK R+A AGTFRRP KPT GL E L Sbjct: 181 APLSGLAARVAHRIPVPVVDQVIAAVKQAEALLALKLRRATAGTFRRPAAKPTTGLPEAL 240 Query: 241 AAIIEHRS 248 AA +EHR Sbjct: 241 AARLEHRD 248 >ref|YP_727516.1| hydantoin racemase [Ralstonia eutropha H16] ref|YP_004686822.1| hydantoin racemase HyuE [Cupriavidus necator N-1] emb|CAJ94148.1| hydantoin racemase [Ralstonia eutropha H16] gb|AEI78341.1| hydantoin racemase HyuE [Cupriavidus necator N-1] Length = 247 Score = 329 bits (844), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 185/247 (74%), Positives = 206/247 (83%) Query: 1 MKILLLNPNTTADVTDLLHAAGSKVASAGTELVPVTAARGVPYIATRAEAQIGGAIALEM 60 M+IL+LNPNT+ +T L AA ++ A+ GTELVP+TA+RGVPYIATRAEAQIGGAIALEM Sbjct: 1 MRILVLNPNTSEGITARLMAAATEAAAPGTELVPLTASRGVPYIATRAEAQIGGAIALEM 60 Query: 61 LAEAAPGVDAAVIAAFGDPGLFGARELFAFPVVGLAEAAMLTACMLGRRFAIVTFAGALA 120 LAE DAA+IAAFGDPGL GARELF PVVG+AEAAML+ACMLGRRFAIVTFA AL Sbjct: 61 LAEHHGQFDAAIIAAFGDPGLMGARELFDLPVVGMAEAAMLSACMLGRRFAIVTFARALG 120 Query: 121 PWYEECVAMHGLSARCAGIRALDGRFQSISQVQAEKEELLVALANRAVEQDNADVVILSG 180 PWYEECV MHGL +R AGIR LDG F S+S VQ EKE +LV LANRAV +D ADVVIL+G Sbjct: 121 PWYEECVDMHGLRSRLAGIRMLDGSFASVSDVQEEKEAVLVELANRAVAEDEADVVILAG 180 Query: 181 APLAGLAAKVRDRIPVPVVDPVAAAVRQAETLAMLKPRKAVAGTFRRPDPKPTRGLAEPL 240 APLAGLAA+VRDRIPVPVVD +AAAV+QAE L L+PRKA AGTFRRPD KPT GL L Sbjct: 181 APLAGLAARVRDRIPVPVVDQMAAAVKQAEALVALQPRKATAGTFRRPDAKPTLGLPAAL 240 Query: 241 AAIIEHR 247 AA IEHR Sbjct: 241 AARIEHR 247