BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0018.0002.p (445 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773362.1| methylamine utilization protein [Bradyrhizobium... 716 0.0 ref|YP_004230879.1| Di-heme cytochrome c peroxidase [Burkholderi... 541 e-152 ref|YP_001779620.1| di-heme cytochrome c peroxidase [Burkholderi... 529 e-148 ref|YP_623884.1| di-haem cytochrome c peroxidase [Burkholderia c... 527 e-147 ref|ZP_04941769.1| Di-haem cytochrome c peroxidase [Burkholderia... 527 e-147 >ref|NP_773362.1| methylamine utilization protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51987.1| bll6722 [Bradyrhizobium japonicum USDA 110] Length = 447 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/449 (80%), Positives = 384/449 (85%), Gaps = 8/449 (1%) Query: 1 MNGRTLWLLGAGLLCMAGTVAAVETQGLP-----GTNPNPVQLRRPPVTPLSAMAQLGQK 55 MN RT+WL GAGLLC+AG V AV TQG G NPNPV+L RPP PLSAMAQLG++ Sbjct: 1 MNSRTMWLFGAGLLCLAGAVLAVATQGFAEANPAGANPNPVRLMRPPAAPLSAMAQLGRE 60 Query: 56 IFFDASLSSSGALSCASCHSPDHAYGPPNDGPVMLGGPAQSRQGTRAVPGLTYLERQPNF 115 IF+DASLSSSGALSCASCHSPDHAYGPPNDGPVMLGG SR G RAVP LTYL+R PNF Sbjct: 61 IFYDASLSSSGALSCASCHSPDHAYGPPNDGPVMLGGATLSRPGARAVPSLTYLDRHPNF 120 Query: 116 SIGPEKDEDDNVVDFAQLAALGQQAPRAKKVATGTAASAVNIVPQGGLFWDGRADTLQDQ 175 SIGP+K +DDNVVD AQ+AALGQ A R K A G+ ASA NIVPQGGLFWDGRADTLQDQ Sbjct: 121 SIGPDKGDDDNVVDLAQMAALGQLAARTTKTAGGSGASA-NIVPQGGLFWDGRADTLQDQ 179 Query: 176 AIFPLLDPNEMDGGSIEIVVQKLRQASYAPRFAELFGAQVFDNTRLLVAEAMFAVARYQV 235 A+FPLLDPNEMDGG EIV KLR+A YA RF ELFGA V N RLL+AEAMFAVARYQV Sbjct: 180 ALFPLLDPNEMDGGRAEIVAGKLRRAPYATRFVELFGAGVLKNQRLLIAEAMFAVARYQV 239 Query: 236 EEPSFHPYTSKFDYWLEGKVRLNESELRGLQLFNDPDKANGGGSPCHTSQPTRDGLPPLF 295 EEPSFHPYTSK+DYWLEGK RL+ESELRGLQ FNDPDKAN G CHTS PTRDGLPPLF Sbjct: 240 EEPSFHPYTSKYDYWLEGKARLSESELRGLQAFNDPDKANCAG--CHTSAPTRDGLPPLF 297 Query: 296 TDHQYEALGAPRNAALAGNRDPDHFDLGVCGPYRTDIAEQTQYCGMFLTPTLRNTATRRV 355 TDHQYEALGAPRNA LA NRDP++FDLGVCGP RTD+ EQTQYCGMFLTPTLRNTA R Sbjct: 298 TDHQYEALGAPRNAELANNRDPNYFDLGVCGPNRTDMPEQTQYCGMFLTPTLRNTAVRHA 357 Query: 356 FFHNGVFNSLEQVLDFYNFRDTNPEKVFPRGADGTVRKYDDLPEKYHGNVDVSDPPFERH 415 FFHNGVF SLEQVLDFYNFRDTNPEKVFPR ADG VRKYDDLP+KYH NVDV+DPPF+RH Sbjct: 358 FFHNGVFRSLEQVLDFYNFRDTNPEKVFPRAADGAVRKYDDLPQKYHANVDVTDPPFDRH 417 Query: 416 LGDTPAMTAQDEADIIAFLKTLTDGYQPE 444 GD PAMT Q+EADIIAFLKTLTDGY+PE Sbjct: 418 PGDRPAMTDQEEADIIAFLKTLTDGYKPE 446 >ref|YP_004230879.1| Di-heme cytochrome c peroxidase [Burkholderia sp. CCGE1001] gb|ADX57819.1| Di-heme cytochrome c peroxidase [Burkholderia sp. CCGE1001] Length = 454 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 263/425 (61%), Positives = 324/425 (76%), Gaps = 4/425 (0%) Query: 20 VAAVETQGLPGTNPNPVQLRRPPV-TPLSAMAQLGQKIFFDASLSSSGALSCASCHSPDH 78 V V + L G NP+P+QL+RP LSA+AQLG+KIFFD +LS+SG SCASCHSP H Sbjct: 30 VVGVMVESLTGANPSPIQLQRPEAPAQLSAVAQLGKKIFFDPTLSASGRQSCASCHSPAH 89 Query: 79 AYGPPNDGPVMLGGPAQSRQGTRAVPGLTYLERQPNFSIGPEKDEDDNVVDFAQLAALGQ 138 A+GPPN V GGP+ S+QG R P L YL RQPNFSIGP+ + DN D AQ+A+ Sbjct: 90 AFGPPNGLAVQPGGPSLSQQGYRPPPSLMYLYRQPNFSIGPDTGDADNAPDLAQMASQVS 149 Query: 139 QAPRAKKVATGTAASAVNIVPQGGLFWDGRADTLQDQAIFPLLDPNEMDGGSIEIVVQKL 198 RA+K A G +A +VPQGG+FWDGRADTLQ QA P+L+P EM S V+ K+ Sbjct: 150 GVARAQKNA-GVVPAAPAMVPQGGMFWDGRADTLQAQAAGPMLNPVEMANTSEADVMAKI 208 Query: 199 RQASYAPRFAELFGAQVFDNTRLLVAEAMFAVARYQVEEPSFHPYTSKFDYWLEGKVRLN 258 ++ Y F +LFG+ VF+NT L ++EAMFAVARYQVEE +FHPY+SK+DYWLEGK RL+ Sbjct: 209 QRTQYRNDFLQLFGSNVFENTSLAMSEAMFAVARYQVEEQAFHPYSSKYDYWLEGKARLS 268 Query: 259 ESELRGLQLFNDPDKANGGGSPCHTSQPTRDGLPPLFTDHQYEALGAPRNAALAGNRDPD 318 ++ELRGL+LFNDP+KAN G CH S+P+ DG PP+FTD+QYEALGAPRN +A N+DP+ Sbjct: 269 QAELRGLRLFNDPNKANCAG--CHLSKPSSDGTPPMFTDYQYEALGAPRNNDIAANKDPE 326 Query: 319 HFDLGVCGPYRTDIAEQTQYCGMFLTPTLRNTATRRVFFHNGVFNSLEQVLDFYNFRDTN 378 FD+G+CGP+RTD+ QTQYCGMFLTPTLRN +TR+VFFHNGVF SLEQV+ FYN R+T Sbjct: 327 FFDMGICGPFRTDLKGQTQYCGMFLTPTLRNVSTRKVFFHNGVFASLEQVMAFYNERNTA 386 Query: 379 PEKVFPRGADGTVRKYDDLPEKYHGNVDVSDPPFERHLGDTPAMTAQDEADIIAFLKTLT 438 P+K +PRG DG V+KY+DLP ++H N+D D PF+R LGDTPAMT D DIIAFLKTL Sbjct: 387 PQKFYPRGGDGKVQKYNDLPARFHANIDDKDAPFDRKLGDTPAMTDADIRDIIAFLKTLD 446 Query: 439 DGYQP 443 DGYQP Sbjct: 447 DGYQP 451 >ref|YP_001779620.1| di-heme cytochrome c peroxidase [Burkholderia cenocepacia MC0-3] gb|ACA95130.1| Di-haem cytochrome c peroxidase [Burkholderia cenocepacia MC0-3] Length = 473 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 269/447 (60%), Positives = 325/447 (72%), Gaps = 14/447 (3%) Query: 4 RTLWLLGAGLLCMAGTVAAVETQ----------GLPGTNPNPVQLRRPPVTPLSAMAQLG 53 R ++LGA ++ A TQ G NP+PV L+RP PLSA+AQLG Sbjct: 27 RAAYVLGAAVIGYGAFAIAFPTQVPAAIGTVVADWTGANPHPVVLQRPAAQPLSAVAQLG 86 Query: 54 QKIFFDASLSSSGALSCASCHSPDHAYGPPNDGPVMLGGPAQSRQGTRAVPGLTYLERQP 113 + +F D SLS+SG SCASCHSPDHAYGPPN V GG A ++QG R P L YL RQP Sbjct: 87 RALFHDPSLSASGKQSCASCHSPDHAYGPPNALDVQPGGLAMTQQGYRPPPSLMYLYRQP 146 Query: 114 NFSIGPEKDEDDNVVDFAQLAALGQQAPRAKKVATGTAASAVNIVPQGGLFWDGRADTLQ 173 NFSIGP+ E+D AQ A +A+KVA GT+A A +VPQGG+FWDGRADTLQ Sbjct: 147 NFSIGPDAGENDAAPSVAQQATAAAGVVKAQKVA-GTSA-APQLVPQGGMFWDGRADTLQ 204 Query: 174 DQAIFPLLDPNEMDGGSIEIVVQKLRQASYAPRFAELFGAQVFDNTRLLVAEAMFAVARY 233 QA PLL+P EM SI+ V +KL Q+S+ +F +LFGA+VF +L V+EAMFA+ARY Sbjct: 205 QQAFGPLLNPVEMANASIDDVTRKLAQSSHRAQFEQLFGARVFSTPQLAVSEAMFAIARY 264 Query: 234 QVEEPSFHPYTSKFDYWLEGKVRLNESELRGLQLFNDPDKANGGGSPCHTSQPTRDGLPP 293 QVE+PSFHPY SK+D WLEG+ RL ++ELRGL+LFNDPDKAN G CH S+P +DGLPP Sbjct: 265 QVEDPSFHPYDSKYDRWLEGRARLTQAELRGLRLFNDPDKANCAG--CHLSKPGKDGLPP 322 Query: 294 LFTDHQYEALGAPRNAALAGNRDPDHFDLGVCGPYRTDIAEQTQYCGMFLTPTLRNTATR 353 +FTD+QYEALGAPRN ALA NR+P +DLGVCGP+R D+ +QTQYCGMFLTPTLRN ATR Sbjct: 323 MFTDYQYEALGAPRNRALAQNRNPAFYDLGVCGPFRDDLKDQTQYCGMFLTPTLRNAATR 382 Query: 354 RVFFHNGVFNSLEQVLDFYNFRDTNPEKVFPRGADGTVRKYDDLPEKYHGNVDVSDPPFE 413 VFFHNGVF++L+QV+ FYN R +P+K + RGADG V +YDD+P KY NVDV+D PF+ Sbjct: 383 HVFFHNGVFHTLDQVMAFYNERSISPQKFYARGADGKVDEYDDIPPKYRANVDVTDAPFD 442 Query: 414 RHLGDTPAMTAQDEADIIAFLKTLTDG 440 R GD PAMTAQD DI AFL TLTD Sbjct: 443 RKPGDKPAMTAQDIKDIEAFLGTLTDA 469 >ref|YP_623884.1| di-haem cytochrome c peroxidase [Burkholderia cenocepacia AU 1054] ref|YP_837971.1| di-haem cytochrome c peroxidase [Burkholderia cenocepacia HI2424] gb|ABF78911.1| Di-heme cytochrome c peroxidase [Burkholderia cenocepacia AU 1054] gb|ABK11078.1| Di-heme cytochrome c peroxidase [Burkholderia cenocepacia HI2424] Length = 473 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 266/423 (62%), Positives = 320/423 (75%), Gaps = 8/423 (1%) Query: 18 GTVAAVETQGLPGTNPNPVQLRRPPVTPLSAMAQLGQKIFFDASLSSSGALSCASCHSPD 77 GTV A T G NP+PV L+RP PLSA+AQLG+ +F D SLS+SG SCASCHSPD Sbjct: 55 GTVVADWT----GANPHPVVLQRPAAQPLSAVAQLGRALFHDPSLSASGKQSCASCHSPD 110 Query: 78 HAYGPPNDGPVMLGGPAQSRQGTRAVPGLTYLERQPNFSIGPEKDEDDNVVDFAQLAALG 137 HAYGPPN V GG A ++QG R P L YL RQPNFSIGP+ E+D AQ A Sbjct: 111 HAYGPPNALDVQPGGLAMTQQGYRPPPSLMYLYRQPNFSIGPDAGENDAAPSVAQQATAA 170 Query: 138 QQAPRAKKVATGTAASAVNIVPQGGLFWDGRADTLQDQAIFPLLDPNEMDGGSIEIVVQK 197 +A+KVA GT+A A +VPQGG+FWDGRADTLQ QA PLL+P EM S++ V +K Sbjct: 171 AGVVKAQKVA-GTSA-APQLVPQGGMFWDGRADTLQQQAFGPLLNPVEMANASVDDVARK 228 Query: 198 LRQASYAPRFAELFGAQVFDNTRLLVAEAMFAVARYQVEEPSFHPYTSKFDYWLEGKVRL 257 L Q+S+ +F +LFGA+VF +L V+EAMFA+ARYQVE+PSFHPY SK+D WLEG+ RL Sbjct: 229 LAQSSHRAQFEQLFGARVFSTPQLAVSEAMFAIARYQVEDPSFHPYDSKYDRWLEGRARL 288 Query: 258 NESELRGLQLFNDPDKANGGGSPCHTSQPTRDGLPPLFTDHQYEALGAPRNAALAGNRDP 317 ++ELRGL+LFNDPDKAN G CH S+P +DGLPP+FTD+QYEALGAPRN ALA NR+P Sbjct: 289 TQAELRGLRLFNDPDKANCAG--CHLSKPGKDGLPPMFTDYQYEALGAPRNRALAQNRNP 346 Query: 318 DHFDLGVCGPYRTDIAEQTQYCGMFLTPTLRNTATRRVFFHNGVFNSLEQVLDFYNFRDT 377 +DLGVCGP+R D+ +QTQYCGMFLTPTLRN+ATR VFFHNGVF++L+QV+ FYN R Sbjct: 347 AFYDLGVCGPFRDDLKDQTQYCGMFLTPTLRNSATRHVFFHNGVFHTLDQVMAFYNERSI 406 Query: 378 NPEKVFPRGADGTVRKYDDLPEKYHGNVDVSDPPFERHLGDTPAMTAQDEADIIAFLKTL 437 +P+K + RGADG V +YDD+P KY NVDV+D PF+R GD PAMTAQD DI AFL TL Sbjct: 407 SPQKFYSRGADGKVDEYDDIPPKYRANVDVTDAPFDRKPGDKPAMTAQDIKDIEAFLGTL 466 Query: 438 TDG 440 TD Sbjct: 467 TDA 469 >ref|ZP_04941769.1| Di-haem cytochrome c peroxidase [Burkholderia cenocepacia PC184] gb|EAY64940.1| Di-haem cytochrome c peroxidase [Burkholderia cenocepacia PC184] Length = 473 Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust. Identities = 266/423 (62%), Positives = 320/423 (75%), Gaps = 8/423 (1%) Query: 18 GTVAAVETQGLPGTNPNPVQLRRPPVTPLSAMAQLGQKIFFDASLSSSGALSCASCHSPD 77 GTV A T G NP+PV L+RP PLSA+AQLG+ +F D SLS+SG SCASCHSPD Sbjct: 55 GTVVADWT----GANPHPVVLQRPAAQPLSAVAQLGRALFHDPSLSASGKQSCASCHSPD 110 Query: 78 HAYGPPNDGPVMLGGPAQSRQGTRAVPGLTYLERQPNFSIGPEKDEDDNVVDFAQLAALG 137 HAYGPPN V GG A ++QG R P L YL RQPNFSIGP+ E+D AQ A Sbjct: 111 HAYGPPNALDVQPGGLAMTQQGYRPPPSLMYLYRQPNFSIGPDAGENDAAPSVAQQATAA 170 Query: 138 QQAPRAKKVATGTAASAVNIVPQGGLFWDGRADTLQDQAIFPLLDPNEMDGGSIEIVVQK 197 +A+KVA GT+A A +VPQGG+FWDGRADTLQ QA PLL+P EM S++ V +K Sbjct: 171 AGVVKAQKVA-GTSA-APQLVPQGGMFWDGRADTLQQQAFGPLLNPVEMANASVDDVARK 228 Query: 198 LRQASYAPRFAELFGAQVFDNTRLLVAEAMFAVARYQVEEPSFHPYTSKFDYWLEGKVRL 257 L Q+S+ +F +LFGA+VF +L V+EAMFA+ARYQVE+PSFHPY SK+D WLEG+ RL Sbjct: 229 LAQSSHRAQFEQLFGARVFSTPQLAVSEAMFAIARYQVEDPSFHPYDSKYDRWLEGRARL 288 Query: 258 NESELRGLQLFNDPDKANGGGSPCHTSQPTRDGLPPLFTDHQYEALGAPRNAALAGNRDP 317 ++ELRGL+LFNDPDKAN G CH S+P +DGLPP+FTD+QYEALGAPRN ALA NR+P Sbjct: 289 TQAELRGLRLFNDPDKANCAG--CHLSKPGKDGLPPMFTDYQYEALGAPRNRALAQNRNP 346 Query: 318 DHFDLGVCGPYRTDIAEQTQYCGMFLTPTLRNTATRRVFFHNGVFNSLEQVLDFYNFRDT 377 +DLGVCGP+R D+ +QTQYCGMFLTPTLRN+ATR VFFHNGVF++L+QV+ FYN R Sbjct: 347 AFYDLGVCGPFRDDLKDQTQYCGMFLTPTLRNSATRHVFFHNGVFHTLDQVMAFYNERSI 406 Query: 378 NPEKVFPRGADGTVRKYDDLPEKYHGNVDVSDPPFERHLGDTPAMTAQDEADIIAFLKTL 437 +P+K + RGADG V +YDD+P KY NVDV+D PF+R GD PAMTAQD DI AFL TL Sbjct: 407 SPQKFYSRGADGKVDEYDDIPPKYRANVDVTDAPFDRKPGDKPAMTAQDIKDIEAFLGTL 466 Query: 438 TDG 440 TD Sbjct: 467 TDA 469