BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0017.0129.p (313 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773090.1| substrate-binding protein [Bradyrhizobium japon... 498 e-139 ref|YP_001239317.1| putative alkanesulfonate ABC transporter sub... 497 e-138 ref|YP_001206329.1| putative alkanesulfonate ABC transporter sub... 486 e-135 ref|ZP_06894802.1| sulfonate ABC superfamily ATP binding cassett... 383 e-104 ref|YP_003067318.1| aliphatic sulfonates ABC transporter substra... 314 1e-83 >ref|NP_773090.1| substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51715.1| bll6450 [Bradyrhizobium japonicum USDA 110] Length = 312 Score = 498 bits (1282), Expect = e-139, Method: Compositional matrix adjust. Identities = 253/313 (80%), Positives = 283/313 (90%), Gaps = 1/313 (0%) Query: 1 MIRLIVAAALALAAVDGAAAQTTLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAP 60 MIRL++A AL L +++ AAAQTTLRVGDQKGN+QAVMEAAG LKDVPY+IEWKE AAAP Sbjct: 1 MIRLMLAGALLLGSLELAAAQTTLRVGDQKGNAQAVMEAAGQLKDVPYKIEWKEVPAAAP 60 Query: 61 LLEALGAGAIDTGLVGDAPFTFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLR 120 LLEAL AGAI+TGLVGDAPFTFAAA+ PVKAIAA+RQ+R+GLA+LVPENS I+SF DLR Sbjct: 61 LLEALSAGAIETGLVGDAPFTFAAASGAPVKAIAAIRQTREGLAILVPENSPIRSFADLR 120 Query: 121 GKKIATGRGSIGHQLILAALESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVS 180 GKKIATGRGSIGHQLILAALE GW SDVQI FLAPSDAK+AYTQG+VDAWSTWEPYVS Sbjct: 121 GKKIATGRGSIGHQLILAALEKSGWSESDVQIAFLAPSDAKIAYTQGSVDAWSTWEPYVS 180 Query: 181 QEEVLFKSRRIITADGITPGLGFQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYA 240 QEEVLFKSRRIIT++G+TPGL FQVA PDAI++KRAEL DF+RRL AARAWS NNV+ YA Sbjct: 181 QEEVLFKSRRIITSEGLTPGLSFQVARPDAIRNKRAELTDFIRRLTAARAWSLNNVDSYA 240 Query: 241 ATWGRLMNIPPAVPLNWLTRAKIRIAPIDDGVVADEQKTIDLYDRWGLIRQKINAADIVD 300 ATWGRLMNIP AVPLNWL+RAKIRIAPIDDGVVADEQ TIDLY RWGLI+QK++AA+IVD Sbjct: 241 ATWGRLMNIPTAVPLNWLSRAKIRIAPIDDGVVADEQGTIDLYLRWGLIKQKLDAAEIVD 300 Query: 301 RSFGAAVEQGAGL 313 RSF A+ + AGL Sbjct: 301 RSFAGAIAK-AGL 312 >ref|YP_001239317.1| putative alkanesulfonate ABC transporter substrate binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ35411.1| putative alkanesulfonate ABC transporter, substrate binding protein [Bradyrhizobium sp. BTAi1] Length = 313 Score = 497 bits (1279), Expect = e-138, Method: Compositional matrix adjust. Identities = 241/313 (76%), Positives = 276/313 (88%) Query: 1 MIRLIVAAALALAAVDGAAAQTTLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAP 60 M R++ A + LA A AQ +LRVGDQKGNS+AVMEAAGVLKDVPY IEWKEF AAAP Sbjct: 1 MKRVLAVAGILLAFTASALAQVSLRVGDQKGNSRAVMEAAGVLKDVPYTIEWKEFVAAAP 60 Query: 61 LLEALGAGAIDTGLVGDAPFTFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLR 120 LLEAL AGAI+TGLVGDAPFTFAAA+ +PVKAIAA+RQ+++GLA+LVPE S I+SFDDL+ Sbjct: 61 LLEALSAGAIETGLVGDAPFTFAAASGVPVKAIAAIRQTQEGLAILVPETSRIRSFDDLK 120 Query: 121 GKKIATGRGSIGHQLILAALESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVS 180 GK IATGRGSIGHQL+LAALES+GW +D+Q+VFL PSDAKVAYTQG+VDAWSTWEPYVS Sbjct: 121 GKTIATGRGSIGHQLVLAALESRGWTTNDIQLVFLPPSDAKVAYTQGSVDAWSTWEPYVS 180 Query: 181 QEEVLFKSRRIITADGITPGLGFQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYA 240 QEEVLFKSRRIIT +G+TPGL FQVATP AIKDKRA LEDFV+RL AARAWS NVE YA Sbjct: 181 QEEVLFKSRRIITGEGLTPGLSFQVATPAAIKDKRAALEDFVQRLTAARAWSLGNVESYA 240 Query: 241 ATWGRLMNIPPAVPLNWLTRAKIRIAPIDDGVVADEQKTIDLYDRWGLIRQKINAADIVD 300 TWGRLMNIPPAVPLNWL RAK+RIAPIDD VV+DEQ+TIDLY R GLI+++++AA I+D Sbjct: 241 ETWGRLMNIPPAVPLNWLKRAKVRIAPIDDSVVSDEQRTIDLYTRSGLIKERLDAAAILD 300 Query: 301 RSFGAAVEQGAGL 313 RSF AA+ +GAGL Sbjct: 301 RSFAAAIAKGAGL 313 >ref|YP_001206329.1| putative alkanesulfonate ABC transporter substrate binding protein [Bradyrhizobium sp. ORS 278] emb|CAL78106.1| putative alkanesulfonate ABC transporter, substrate binding protein [Bradyrhizobium sp. ORS 278] Length = 313 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 241/312 (77%), Positives = 278/312 (89%) Query: 1 MIRLIVAAALALAAVDGAAAQTTLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAP 60 M R+++AA+L LA A AQ TLRVGDQKGN++AVMEAAGVLKDVPY I WKEF AAAP Sbjct: 1 MTRVLLAASLLLALTVSAVAQVTLRVGDQKGNARAVMEAAGVLKDVPYTIAWKEFVAAAP 60 Query: 61 LLEALGAGAIDTGLVGDAPFTFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLR 120 LLEA+ AGAIDTGLVGDAPFTFAAA+ +PVKAIAA+RQ+++GLAVLVPENS IKSFDDL+ Sbjct: 61 LLEAVSAGAIDTGLVGDAPFTFAAASGVPVKAIAAIRQTQEGLAVLVPENSPIKSFDDLK 120 Query: 121 GKKIATGRGSIGHQLILAALESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVS 180 G+KIATGRGSIGHQL+LAALES+GW ASD+Q+VFL PSDAKVAYTQG+VDAWSTWEPYVS Sbjct: 121 GRKIATGRGSIGHQLVLAALESRGWTASDIQLVFLPPSDAKVAYTQGSVDAWSTWEPYVS 180 Query: 181 QEEVLFKSRRIITADGITPGLGFQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYA 240 QEEVLF+SRRIIT +G+TPGL FQVATP AIKD RA LEDFV+RLAAARAWS N+E YA Sbjct: 181 QEEVLFQSRRIITGEGLTPGLSFQVATPAAIKDNRAALEDFVQRLAAARAWSLGNIESYA 240 Query: 241 ATWGRLMNIPPAVPLNWLTRAKIRIAPIDDGVVADEQKTIDLYDRWGLIRQKINAADIVD 300 TWGRLMNIP AVPLNWL RA++RI P+DD VVADEQKTIDLY R GLI+++++AA ++D Sbjct: 241 ETWGRLMNIPSAVPLNWLKRAQVRIVPVDDTVVADEQKTIDLYTRTGLIKERLDAAAVLD 300 Query: 301 RSFGAAVEQGAG 312 RSF AA+ +GAG Sbjct: 301 RSFTAAITKGAG 312 >ref|ZP_06894802.1| sulfonate ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] gb|EFH13484.1| sulfonate ABC superfamily ATP binding cassette transporter, binding protein [Roseomonas cervicalis ATCC 49957] Length = 316 Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust. Identities = 187/289 (64%), Positives = 226/289 (78%) Query: 20 AQTTLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAPLLEALGAGAIDTGLVGDAP 79 AQ LRVGDQ+GN++AVM+AAGVL+ V R W EF AAAPL+EAL AGAIDTGLVGDAP Sbjct: 26 AQAPLRVGDQRGNARAVMQAAGVLEGVEGRFAWSEFPAAAPLVEALNAGAIDTGLVGDAP 85 Query: 80 FTFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLRGKKIATGRGSIGHQLILAA 139 FTF AAA +P KAIAA RQ++DGLA+LVP++SA++S DL GK+IATGRGSIGHQL+LAA Sbjct: 86 FTFGAAAGVPAKAIAATRQNQDGLAILVPKDSAVRSLQDLAGKRIATGRGSIGHQLVLAA 145 Query: 140 LESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVSQEEVLFKSRRIITADGITP 199 LE+ A V++VFL P+DAK AY+ GAV+AWSTWEPYVSQEEVL SRRI+ +GITP Sbjct: 146 LEAAKLPADTVRLVFLLPADAKAAYSSGAVEAWSTWEPYVSQEEVLAGSRRIVDGNGITP 205 Query: 200 GLGFQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYAATWGRLMNIPPAVPLNWLT 259 GL FQ A DAI +R ELEDFVRRL AR W++ N+ YA +W LMN+P V + W T Sbjct: 206 GLSFQAARDDAIASRRPELEDFVRRLTVARRWANENIPAYAKSWSALMNVPEPVAVQWFT 265 Query: 260 RAKIRIAPIDDGVVADEQKTIDLYDRWGLIRQKINAADIVDRSFGAAVE 308 RA+ R+ PIDD VV DEQ IDLY R GL+R++I A DI+DRSF A ++ Sbjct: 266 RARTRVVPIDDAVVRDEQGNIDLYSRAGLVRRRIQAEDILDRSFTATIQ 314 >ref|YP_003067318.1| aliphatic sulfonates ABC transporter substrate-binding protein [Methylobacterium extorquens DM4] emb|CAX23342.1| ABC transporter, substrate-binding protein, aliphatic sulphonates [Methylobacterium extorquens DM4] Length = 313 Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 172/289 (59%), Positives = 208/289 (71%) Query: 1 MIRLIVAAALALAAVDGAAAQTTLRVGDQKGNSQAVMEAAGVLKDVPYRIEWKEFAAAAP 60 M R +V ALALA++ A A+ LRVGDQ+GN++A+MEA GVL +PYR+EW EF AAAP Sbjct: 1 MARWLVLIALALASLTPARAEEVLRVGDQRGNARALMEATGVLDGLPYRLEWSEFPAAAP 60 Query: 61 LLEALGAGAIDTGLVGDAPFTFAAAAKIPVKAIAAVRQSRDGLAVLVPENSAIKSFDDLR 120 LLEAL AG ID G VGDAPFTFAAAA +PVKA A R +DGLA+LV +SAI++ DL+ Sbjct: 61 LLEALNAGVIDAGGVGDAPFTFAAAAGVPVKAFLAFRNRQDGLAILVRPDSAIRTVADLQ 120 Query: 121 GKKIATGRGSIGHQLILAALESKGWQASDVQIVFLAPSDAKVAYTQGAVDAWSTWEPYVS 180 GK+IAT RGSIGHQ++LAALE G A VQ FL P+DAK+A T GAVDAWSTWEPY S Sbjct: 121 GKRIATNRGSIGHQVVLAALEEAGQPADSVQFRFLPPADAKLALTSGAVDAWSTWEPYTS 180 Query: 181 QEEVLFKSRRIITADGITPGLGFQVATPDAIKDKRAELEDFVRRLAAARAWSHNNVEGYA 240 E+ R + +GITPGL + VA+ A+K KRA L D+ RLA ARA + + YA Sbjct: 181 AAELAGLVRVLRDGNGITPGLSYAVASDAALKSKRALLADYAARLARARARALTDPAPYA 240 Query: 241 ATWGRLMNIPPAVPLNWLTRAKIRIAPIDDGVVADEQKTIDLYDRWGLI 289 A W RL+ +P AVPL W RA+ R PIDD V+ADEQ+ IDLY R GLI Sbjct: 241 AAWSRLIGLPEAVPLRWFGRARYRTVPIDDAVIADEQRIIDLYVRAGLI 289